RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 SLC15A1P46059 708 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 GZMKP49863 264 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 RAB13P51153 203 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 SGSHP51688 502 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 SSPNQ14714 243 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 NCF4Q15080 339 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 ANKRD33Q7Z3H0 272 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 DPPA2Q7Z7J5 298 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 GPAT4Q86UL3 456 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 ZC3HC1Q86WB0 502 aaKnown RBP9.65□□□□□ -0.86
NUP50-214ENST00000469163 DMRTC2Q8IXT2 367 aaPredicted RBP9.65□□□□□ -0.86
NUP50-214ENST00000469163 CLEC4FQ8N1N0 589 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 ZNF778Q96MU6 729 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 LINC00052Q96N35 136 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 UCK1Q9HA47 277 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 PNPOQ9NVS9 261 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 UXTQ9UBK9 157 aaPredicted RBP9.65□□□□□ -0.86
NUP50-214ENST00000469163 SLC39A10Q9ULF5 831 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 LOXHD1Q8IVV2 1947 aa9.65□□□□□ -0.87
NUP50-214ENST00000469163 LOC285556D6RIA3 1793 aa9.65□□□□□ -0.87
NUP50-214ENST00000469163 BDP1A6H8Y1 2624 aa9.65□□□□□ -0.87
NUP50-214ENST00000469163 M0QZQ0 153 aa9.65□□□□□ -0.87
NUP50-214ENST00000469163 ADH1CP00326 375 aa9.65□□□□□ -0.87
NUP50-214ENST00000469163 CYBBP04839 570 aa9.65□□□□□ -0.87
NUP50-214ENST00000469163 GSTM5P46439 218 aa9.65□□□□□ -0.87
NUP50-214ENST00000469163 PPP3CCP48454 512 aa9.65□□□□□ -0.87
NUP50-214ENST00000469163 RIDAP52758 137 aaKnown RBP9.65□□□□□ -0.87
NUP50-214ENST00000469163 PLK1P53350 603 aa9.65□□□□□ -0.87
NUP50-214ENST00000469163 SMAD2Q15796 467 aaKnown RBP9.65□□□□□ -0.87
NUP50-214ENST00000469163 SLC36A3Q495N2 470 aa9.65□□□□□ -0.87
NUP50-214ENST00000469163 C2orf27AQ580R0 203 aa9.65□□□□□ -0.87
NUP50-214ENST00000469163 CES4AQ5XG92 561 aa9.65□□□□□ -0.87
NUP50-214ENST00000469163 LRRC8EQ6NSJ5 796 aa9.65□□□□□ -0.87
NUP50-214ENST00000469163 ADGRD2Q7Z7M1 963 aa9.65□□□□□ -0.87
NUP50-214ENST00000469163 IGDCC3Q8IVU1 814 aa9.65□□□□□ -0.87
NUP50-214ENST00000469163 DNAJA4Q8WW22 397 aaPredicted RBP9.65□□□□□ -0.87
NUP50-214ENST00000469163 FKBP10Q96AY3 582 aa9.65□□□□□ -0.87
NUP50-214ENST00000469163 PFDN5Q99471 154 aa9.65□□□□□ -0.87
NUP50-214ENST00000469163 VRK1Q99986 396 aaPredicted RBP9.65□□□□□ -0.87
NUP50-214ENST00000469163 ZDHHC6Q9H6R6 413 aa9.65□□□□□ -0.87
NUP50-214ENST00000469163 ABCB8Q9NUT2 735 aa9.65□□□□□ -0.87
NUP50-214ENST00000469163 PAK5Q9P286 719 aa9.65□□□□□ -0.87
NUP50-214ENST00000469163 MIOXQ9UGB7 285 aa9.65□□□□□ -0.87
NUP50-214ENST00000469163 CD84Q9UIB8 345 aa9.65□□□□□ -0.87
NUP50-214ENST00000469163 GRIP1Q9Y3R0 1128 aa9.65□□□□□ -0.87
NUP50-214ENST00000469163 COPG1Q9Y678 874 aaKnown RBP9.65□□□□□ -0.87
NUP50-214ENST00000469163 SESN1Q9Y6P5 492 aa9.65□□□□□ -0.87
NUP50-214ENST00000469163 TRPM7Q96QT4 1865 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 ANTXRLA6NF34 631 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 KPNA3O00505 521 aaPredicted RBP9.64□□□□□ -0.87
NUP50-214ENST00000469163 EI24O14681 340 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 HS6ST1O60243 411 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 APBB3O95704 486 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 GUCA1CO95843 209 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 HLA-EP13747 358 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 CD1EP15812 388 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 TYMPP19971 482 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 TACR2P21452 398 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 TGFBR1P36897 503 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 IDH3AP50213 366 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 POU4F1Q01851 419 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 SLC3A1Q07837 685 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 BAMBIQ13145 260 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 MS4A13Q5J8X5 152 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 R3HCC1LQ7Z5L2 792 aaKnown RBP9.64□□□□□ -0.87
NUP50-214ENST00000469163 CARFQ8N187 725 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 PCDH20Q8N6Y1 951 aaKnown RBP9.64□□□□□ -0.87
NUP50-214ENST00000469163 ZYG11BQ9C0D3 744 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 RIBC2Q9H4K1 309 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 CTSFQ9UBX1 484 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 KCTD3Q9Y597 815 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 AGAP5A6NIR3 686 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 WASH3PC4AMC7 463 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 SCAMP2O15127 329 aaKnown RBP9.64□□□□□ -0.87
NUP50-214ENST00000469163 ZBTB14O43829 449 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 CYP7B1O75881 506 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 IL7RP16871 459 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 PSMB9P28065 219 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 P2RY4P51582 365 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 TAB1Q15750 504 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 ZMAT1Q5H9K5 638 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 C9orf152Q5JTZ5 239 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 SPANXN2Q5MJ10 180 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 TPRG1LQ5T0D9 272 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 SEL1L3Q68CR1 1132 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 ZYG11AQ6WRX3 759 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 CHMP1BQ7LBR1 199 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 SLC39A11Q8N1S5 342 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 PARP16Q8N5Y8 322 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 PHF10Q8WUB8 498 aaKnown RBP9.64□□□□□ -0.87
NUP50-214ENST00000469163 APOL4Q9BPW4 351 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 CWH43Q9H720 699 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 CSNK1G3Q9Y6M4 447 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 LOC110117498-PIK3R3F6TDL0 507 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 SNX4O95219 450 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 DHFRP00374 187 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 IL1BP01584 269 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 BMP1P13497 986 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 HOXC8P31273 242 aa9.64□□□□□ -0.87
NUP50-214ENST00000469163 PPM1AP35813 382 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms