RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 MKS1Q9NXB0 559 aa11.41□□□□□ -0.58
VPS13D-204ENST00000469054 SENP1Q9P0U3 644 aa11.41□□□□□ -0.58
VPS13D-204ENST00000469054 DHCR7Q9UBM7 475 aaKnown RBP11.41□□□□□ -0.58
VPS13D-204ENST00000469054 EMCNQ9ULC0 261 aa11.41□□□□□ -0.58
VPS13D-204ENST00000469054 RUVBL1Q9Y265 456 aaKnown RBP11.41□□□□□ -0.58
VPS13D-204ENST00000469054 ANGPTL3Q9Y5C1 460 aa11.41□□□□□ -0.58
VPS13D-204ENST00000469054 A0A087WV48 116 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 P2RX6O15547 441 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 DLX3O60479 287 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 PLIN3O60664 434 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 KATNA1O75449 491 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 WFS1O76024 890 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 PROCP04070 461 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 RPS17P08708 135 aaKnown RBP11.4□□□□□ -0.58
VPS13D-204ENST00000469054 H2AFXP16104 143 aaPredicted RBP11.4□□□□□ -0.58
VPS13D-204ENST00000469054 ALAS2P22557 587 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 AHRP35869 848 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 STAT5AP42229 794 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 CASP2P42575 452 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 PIK3CGP48736 1102 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 NFKB2Q00653 900 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 GTF2H2Q13888 395 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 DOC2AQ14183 400 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 E2F2Q14209 437 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 SLBPQ14493 270 aaKnown RBP eCLIP11.4□□□□□ -0.58
VPS13D-204ENST00000469054 RBBP5Q15291 538 aaKnown RBP11.4□□□□□ -0.58
VPS13D-204ENST00000469054 MUM1Q2TAK8 710 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 HKDC1Q2TB90 917 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 TNFAIP8L3Q5GJ75 292 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 MANEAQ5SRI9 462 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 GARNL3Q5VVW2 1013 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 ZNF385CQ66K41 422 aaPredicted RBP11.4□□□□□ -0.58
VPS13D-204ENST00000469054 GTF2H2CQ6P1K8 395 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 TMIGD1Q6UXZ0 262 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 TTLL10Q6ZVT0 673 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 GOLGA7Q7Z5G4 137 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 ASPGQ86U10 573 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 SLC22A9Q8IVM8 553 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 CAMKVQ8NCB2 501 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 SLC13A3Q8WWT9 602 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 MR1Q95460 341 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 ZBTB9Q96C00 473 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 TM4SF19Q96DZ7 209 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 APOPT1Q96IL0 206 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 GBP5Q96PP8 586 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 EFCAB11Q9BUY7 163 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 C1QTNF3Q9BXJ4 246 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 NLNQ9BYT8 704 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 PITHD1Q9GZP4 211 aaPredicted RBP11.4□□□□□ -0.58
VPS13D-204ENST00000469054 CENPHQ9H3R5 247 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 NT5DC2Q9H857 520 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 TXLNGQ9NUQ3 528 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 WDR70Q9NW82 654 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 COPG2Q9UBF2 871 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 PLLPQ9Y342 182 aa11.4□□□□□ -0.58
VPS13D-204ENST00000469054 G3V2L1 256 aa11.39□□□□□ -0.59
VPS13D-204ENST00000469054 MED26O95402 600 aa11.39□□□□□ -0.59
VPS13D-204ENST00000469054 STATHP02808 62 aa11.39□□□□□ -0.59
VPS13D-204ENST00000469054 MYL2P10916 166 aa11.39□□□□□ -0.59
VPS13D-204ENST00000469054 CREB1P16220 341 aa11.39□□□□□ -0.59
VPS13D-204ENST00000469054 CD22P20273 847 aa11.39□□□□□ -0.59
VPS13D-204ENST00000469054 AGXTP21549 392 aa11.39□□□□□ -0.59
VPS13D-204ENST00000469054 PRKAA2P54646 552 aa11.39□□□□□ -0.59
VPS13D-204ENST00000469054 HERVK_113P63132 956 aa11.39□□□□□ -0.59
VPS13D-204ENST00000469054 DCDP81605 110 aaKnown RBP11.39□□□□□ -0.59
VPS13D-204ENST00000469054 LAPTM5Q13571 262 aa11.39□□□□□ -0.59
VPS13D-204ENST00000469054 PWP1Q13610 501 aa11.39□□□□□ -0.59
VPS13D-204ENST00000469054 COL9A2Q14055 689 aaPredicted RBP11.39□□□□□ -0.59
VPS13D-204ENST00000469054 PAGE2BQ5JRK9 111 aa11.39□□□□□ -0.59
VPS13D-204ENST00000469054 ZNF678Q5SXM1 525 aa11.39□□□□□ -0.59
VPS13D-204ENST00000469054 C1orf189Q5VU69 101 aa11.39□□□□□ -0.59
VPS13D-204ENST00000469054 ZYG11AQ6WRX3 759 aa11.39□□□□□ -0.59
VPS13D-204ENST00000469054 ARHGEF39Q8N4T4 335 aa11.39□□□□□ -0.59
VPS13D-204ENST00000469054 ANKRD53Q8N9V6 530 aa11.39□□□□□ -0.59
VPS13D-204ENST00000469054 CCDC63Q8NA47 563 aa11.39□□□□□ -0.59
VPS13D-204ENST00000469054 TTLQ8NG68 377 aa11.39□□□□□ -0.59
VPS13D-204ENST00000469054 RDH11Q8TC12 318 aa11.39□□□□□ -0.59
VPS13D-204ENST00000469054 CCDC126Q96EE4 140 aa11.39□□□□□ -0.59
VPS13D-204ENST00000469054 PGM2Q96G03 612 aa11.39□□□□□ -0.59
VPS13D-204ENST00000469054 C10orf90Q96M02 699 aa11.39□□□□□ -0.59
VPS13D-204ENST00000469054 MACROD1Q9BQ69 325 aa11.39□□□□□ -0.59
VPS13D-204ENST00000469054 DPH2Q9BQC3 489 aaPredicted RBP11.39□□□□□ -0.59
VPS13D-204ENST00000469054 ERVK-6Q9BXR3 956 aa11.39□□□□□ -0.59
VPS13D-204ENST00000469054 IQCGQ9H095 443 aaKnown RBP11.39□□□□□ -0.59
VPS13D-204ENST00000469054 CHST8Q9H2A9 424 aa11.39□□□□□ -0.59
VPS13D-204ENST00000469054 C12orf65Q9H3J6 166 aaKnown RBP11.39□□□□□ -0.59
VPS13D-204ENST00000469054 NOL11Q9H8H0 719 aaKnown RBP11.39□□□□□ -0.59
VPS13D-204ENST00000469054 IPPKQ9H8X2 491 aa11.39□□□□□ -0.59
VPS13D-204ENST00000469054 ZBTB26Q9HCK0 441 aa11.39□□□□□ -0.59
VPS13D-204ENST00000469054 NDOR1Q9UHB4 597 aa11.39□□□□□ -0.59
VPS13D-204ENST00000469054 ZFP69BQ9UJL9 534 aa11.39□□□□□ -0.59
VPS13D-204ENST00000469054 PCTPQ9UKL6 214 aa11.39□□□□□ -0.59
VPS13D-204ENST00000469054 BOLA1Q9Y3E2 137 aa11.39□□□□□ -0.59
VPS13D-204ENST00000469054 AHCTF1Q8WYP5 2266 aa11.39□□□□□ -0.59
VPS13D-204ENST00000469054 APC2O95996 2303 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 URB1O60287 2271 aaKnown RBP11.38□□□□□ -0.59
VPS13D-204ENST00000469054 CEP295Q9C0D2 2601 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 LOC101059948A0A1B0GTJ6 334 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 A0A1B0GX78 115 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 SRRM3A6NNA2 597 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms