RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 FOXC1Q12948 553 aa14.55□□□□□ -0.08
SNIP1-202ENST00000468040 STX3Q13277 289 aa14.55□□□□□ -0.08
SNIP1-202ENST00000468040 CPSF6Q16630 551 aaKnown RBP eCLIP14.55□□□□□ -0.08
SNIP1-202ENST00000468040 DEFB110Q30KQ9 67 aa14.55□□□□□ -0.08
SNIP1-202ENST00000468040 ARL13AQ5H913 290 aaPredicted RBP14.55□□□□□ -0.08
SNIP1-202ENST00000468040 LETMD1Q6P1Q0 360 aa14.55□□□□□ -0.08
SNIP1-202ENST00000468040 SYVN1Q86TM6 617 aa14.55□□□□□ -0.08
SNIP1-202ENST00000468040 PLD3Q8IV08 490 aa14.55□□□□□ -0.08
SNIP1-202ENST00000468040 LAS2Q8IYD9 372 aa14.55□□□□□ -0.08
SNIP1-202ENST00000468040 GPR135Q8IZ08 494 aa14.55□□□□□ -0.08
SNIP1-202ENST00000468040 ZNF655Q8N720 491 aaPredicted RBP14.55□□□□□ -0.08
SNIP1-202ENST00000468040 ZNF740Q8NDX6 193 aa14.55□□□□□ -0.08
SNIP1-202ENST00000468040 FAM76AQ8TAV0 307 aa14.55□□□□□ -0.08
SNIP1-202ENST00000468040 ZNF501Q96CX3 271 aaPredicted RBP14.55□□□□□ -0.08
SNIP1-202ENST00000468040 FCRL4Q96PJ5 515 aa14.55□□□□□ -0.08
SNIP1-202ENST00000468040 NLNQ9BYT8 704 aa14.55□□□□□ -0.08
SNIP1-202ENST00000468040 SLC29A3Q9BZD2 475 aa14.55□□□□□ -0.08
SNIP1-202ENST00000468040 SPNS1Q9H2V7 528 aa14.55□□□□□ -0.08
SNIP1-202ENST00000468040 MANSC1Q9H8J5 431 aa14.55□□□□□ -0.08
SNIP1-202ENST00000468040 ENAMQ9NRM1 1142 aa14.55□□□□□ -0.08
SNIP1-202ENST00000468040 SLC39A1Q9NY26 324 aa14.55□□□□□ -0.08
SNIP1-202ENST00000468040 ADGRE2Q9UHX3 823 aa14.55□□□□□ -0.08
SNIP1-202ENST00000468040 ZFP69BQ9UJL9 534 aa14.55□□□□□ -0.08
SNIP1-202ENST00000468040 RARRES3Q9UL19 164 aa14.55□□□□□ -0.08
SNIP1-202ENST00000468040 RNF11Q9Y3C5 154 aa14.55□□□□□ -0.08
SNIP1-202ENST00000468040 TSC22D4Q9Y3Q8 395 aa14.55□□□□□ -0.08
SNIP1-202ENST00000468040 H0YGG7 62 aa14.54□□□□□ -0.08
SNIP1-202ENST00000468040 AGRPO00253 132 aa14.54□□□□□ -0.08
SNIP1-202ENST00000468040 UBFD1O14562 309 aaKnown RBP14.54□□□□□ -0.08
SNIP1-202ENST00000468040 KLF11O14901 512 aa14.54□□□□□ -0.08
SNIP1-202ENST00000468040 HYAL3O43820 417 aaPredicted RBP14.54□□□□□ -0.08
SNIP1-202ENST00000468040 LCMT2O60294 686 aaKnown RBP14.54□□□□□ -0.08
SNIP1-202ENST00000468040 CRCPO75575 148 aa14.54□□□□□ -0.08
SNIP1-202ENST00000468040 OR2B3O76000 313 aa14.54□□□□□ -0.08
SNIP1-202ENST00000468040 OR4F21O95013 312 aa14.54□□□□□ -0.08
SNIP1-202ENST00000468040 SLC35G6P0C7Q6 338 aa14.54□□□□□ -0.08
SNIP1-202ENST00000468040 FGF5P12034 268 aa14.54□□□□□ -0.08
SNIP1-202ENST00000468040 CCL4P13236 92 aa14.54□□□□□ -0.08
SNIP1-202ENST00000468040 ITGA1P56199 1179 aa14.54□□□□□ -0.08
SNIP1-202ENST00000468040 ARF3P61204 181 aaPredicted RBP14.54□□□□□ -0.08
SNIP1-202ENST00000468040 PHEXP78562 749 aa14.54□□□□□ -0.08
SNIP1-202ENST00000468040 C3orf38Q5JPI3 329 aa14.54□□□□□ -0.08
SNIP1-202ENST00000468040 MANEAQ5SRI9 462 aa14.54□□□□□ -0.08
SNIP1-202ENST00000468040 TTC19Q6DKK2 380 aaPredicted RBP14.54□□□□□ -0.08
SNIP1-202ENST00000468040 FRMPD2BQ6IN97 320 aa14.54□□□□□ -0.08
SNIP1-202ENST00000468040 TLDC1Q6P9B6 456 aa14.54□□□□□ -0.08
SNIP1-202ENST00000468040 ASPGQ86U10 573 aa14.54□□□□□ -0.08
SNIP1-202ENST00000468040 CUZD1Q86UP6 607 aa14.54□□□□□ -0.08
SNIP1-202ENST00000468040 PPP1R3BQ86XI6 285 aa14.54□□□□□ -0.08
SNIP1-202ENST00000468040 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.54□□□□□ -0.08
SNIP1-202ENST00000468040 KIRREL3Q8IZU9 778 aa14.54□□□□□ -0.08
SNIP1-202ENST00000468040 CSNK1A1LQ8N752 337 aa14.54□□□□□ -0.08
SNIP1-202ENST00000468040 CDYL2Q8N8U2 506 aa14.54□□□□□ -0.08
SNIP1-202ENST00000468040 TRPV3Q8NET8 790 aa14.54□□□□□ -0.08
SNIP1-202ENST00000468040 OR7G3Q8NG95 312 aa14.54□□□□□ -0.08
SNIP1-202ENST00000468040 ZNF285Q96NJ3 590 aa14.54□□□□□ -0.08
SNIP1-202ENST00000468040 ZPBPQ9BS86 351 aa14.54□□□□□ -0.08
SNIP1-202ENST00000468040 DDA1Q9BW61 102 aa14.54□□□□□ -0.08
SNIP1-202ENST00000468040 RHBGQ9H310 441 aa14.54□□□□□ -0.08
SNIP1-202ENST00000468040 IRAK4Q9NWZ3 460 aa14.54□□□□□ -0.08
SNIP1-202ENST00000468040 PISDQ9UG56 409 aa14.54□□□□□ -0.08
SNIP1-202ENST00000468040 ZNF225Q9UK10 706 aa14.54□□□□□ -0.08
SNIP1-202ENST00000468040 ZNF490Q9ULM2 529 aaPredicted RBP14.54□□□□□ -0.08
SNIP1-202ENST00000468040 SNX6Q9UNH7 406 aa14.54□□□□□ -0.08
SNIP1-202ENST00000468040 SATB2Q9UPW6 733 aa14.54□□□□□ -0.08
SNIP1-202ENST00000468040 PCDHGA8Q9Y5G5 932 aa14.54□□□□□ -0.08
SNIP1-202ENST00000468040 AP1M2Q9Y6Q5 423 aa14.54□□□□□ -0.08
SNIP1-202ENST00000468040 PTPRBP23467 1997 aa14.54□□□□□ -0.08
SNIP1-202ENST00000468040 LOC105369274A0A096LPK9 316 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 LOC102723532A0A0G2JNH3 316 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 A0A1B0GTL3 188 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 ANKDD1BA6NHY2 528 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 ZSCAN9O15535 394 aaPredicted RBP14.53□□□□□ -0.08
SNIP1-202ENST00000468040 HCRTR1O43613 425 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 CLEC3AO75596 197 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 KRT6AP02538 564 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 KRT6BP04259 564 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 CAPN1P07384 714 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 CHRNGP07510 517 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 PCNAP12004 261 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 ITIH1P19827 911 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 HMOX2P30519 316 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 PIK3CBP42338 1070 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 CCR10P46092 362 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 SLC1A6P48664 564 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 KRT6CP48668 564 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 VSX2P58304 361 aaPredicted RBP14.53□□□□□ -0.08
SNIP1-202ENST00000468040 RGS1Q08116 209 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 BST1Q10588 318 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 IFT88Q13099 833 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 PWP1Q13610 501 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 GRM7Q14831 915 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 ZRSR2Q15696 482 aaKnown RBP14.53□□□□□ -0.08
SNIP1-202ENST00000468040 DCAF12Q5T6F0 453 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 TMEM164Q5U3C3 297 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 FRG2Q64ET8 278 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 FOXR1Q6PIV2 292 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 CEACAM20Q6UY09 585 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 VN1R4Q7Z5H5 301 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 OR4N4Q8N0Y3 316 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms