RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 INIPQ9NRY2 104 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 GPRC5BQ9NZH0 403 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 FTSJ1Q9UET6 329 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 MARCOQ9UEW3 520 aaPredicted RBP6.6□□□□□ -1.35
SCAF4-204ENST00000467731 BAIAP2L1Q9UHR4 511 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 ENTPD2Q9Y5L3 495 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 TMEM233B4DJY2 109 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 H7BY64 318 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 CAPN5O15484 640 aaPredicted RBP6.6□□□□□ -1.35
SCAF4-204ENST00000467731 DUX1O43812 170 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 NRP2O60462 931 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 FOXD2O60548 495 aaPredicted RBP6.6□□□□□ -1.35
SCAF4-204ENST00000467731 WFS1O76024 890 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 CLDN9O95484 217 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 ESRRBO95718 433 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 LDOC1O95751 146 aaPredicted RBP6.6□□□□□ -1.35
SCAF4-204ENST00000467731 KITP10721 976 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 CD22P20273 847 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 VARSP26640 1264 aaKnown RBP6.6□□□□□ -1.35
SCAF4-204ENST00000467731 SEC24CP53992 1094 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 GFERP55789 205 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 MEF2AQ02078 507 aaPredicted RBP6.6□□□□□ -1.35
SCAF4-204ENST00000467731 IRF8Q02556 426 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 STPG1Q5TH74 334 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 CLEC6AQ6EIG7 209 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 GPRIN3Q6ZVF9 776 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 MILR1Q7Z6M3 343 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 C7orf26Q96N11 449 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 PRAP1Q96NZ9 151 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 ZNF317Q96PQ6 595 aaPredicted RBP6.6□□□□□ -1.35
SCAF4-204ENST00000467731 ABCG4Q9H172 646 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 FGFR1OP2Q9NVK5 253 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 EVA1BQ9NVM1 165 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.6□□□□□ -1.35
SCAF4-204ENST00000467731 POMT2Q9UKY4 750 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 KLHL20Q9Y2M5 609 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 RNF11Q9Y3C5 154 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 FIS1Q9Y3D6 152 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 RAP2CQ9Y3L5 183 aa6.6□□□□□ -1.35
SCAF4-204ENST00000467731 CELSR3Q9NYQ7 3312 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.59□□□□□ -1.35
SCAF4-204ENST00000467731 MATN2O00339 956 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 CBFA2T3O75081 653 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 EBLN1P0CF75 366 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 CKMT2P17540 419 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 MAGP20916 626 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 CMPK1P30085 196 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 CSF2RBP32927 897 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 LSSP48449 732 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 DUSP3P51452 185 aaPredicted RBP6.59□□□□□ -1.35
SCAF4-204ENST00000467731 MTTPP55157 894 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 CFHR1Q03591 330 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 DOC2AQ14183 400 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 CPSF6Q16630 551 aaKnown RBP eCLIP6.59□□□□□ -1.35
SCAF4-204ENST00000467731 ARMC6Q6NXE6 501 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 C6orf89Q6UWU4 347 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 SLCO4C1Q6ZQN7 724 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 FAM92BQ6ZTR7 304 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 USP53Q70EK8 1073 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 ADCK2Q7Z695 626 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 LRRC34Q8IZ02 419 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 CDYL2Q8N8U2 506 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 BAHD1Q8TBE0 780 aaPredicted RBP6.59□□□□□ -1.35
SCAF4-204ENST00000467731 TGM7Q96PF1 710 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 NUDT22Q9BRQ3 303 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 DPH7Q9BTV6 452 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 ILKAPQ9H0C8 392 aaPredicted RBP6.59□□□□□ -1.35
SCAF4-204ENST00000467731 KLHL25Q9H0H3 589 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 SPNS1Q9H2V7 528 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 SLC6A20Q9NP91 592 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 ATAD3AQ9NVI7 634 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 KLHL3Q9UH77 587 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 HAO1Q9UJM8 370 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 KIF26BQ2KJY2 2108 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 A0A1W2PQM1 296 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 FFAR3O14843 346 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 GPR42O15529 346 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 UGDHO60701 494 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 EDF1O60869 148 aaKnown RBP6.59□□□□□ -1.35
SCAF4-204ENST00000467731 DIAPH2O60879 1101 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 RPLP0P05388 317 aaKnown RBP6.59□□□□□ -1.35
SCAF4-204ENST00000467731 CAPN1P07384 714 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 PVRP15151 417 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 ACP1P24666 158 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 CD1CP29017 333 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 SERPINB3P29508 390 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 RPL14P50914 215 aaKnown RBP6.59□□□□□ -1.35
SCAF4-204ENST00000467731 PKNOX1P55347 436 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 ELF3P78545 371 aaPredicted RBP6.59□□□□□ -1.35
SCAF4-204ENST00000467731 ABATP80404 500 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 E2F2Q14209 437 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 TCHHL1Q5QJ38 904 aaPredicted RBP6.59□□□□□ -1.35
SCAF4-204ENST00000467731 ZNF362Q5T0B9 420 aaPredicted RBP6.59□□□□□ -1.35
SCAF4-204ENST00000467731 LIPJQ5W064 366 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 ATG9BQ674R7 924 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 NXPE4Q6UWF7 544 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 FAM129CQ86XR2 697 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 CRLF3Q8IUI8 442 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 GRAMD2AQ8IUY3 354 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 L3MBTL4Q8NA19 623 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms