RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 GPN2Q9H9Y4 310 aaPredicted RBP10.54□□□□□ -0.72
MSH5-212ENST00000467319 ROPN1Q9HAT0 212 aaPredicted RBP10.54□□□□□ -0.72
MSH5-212ENST00000467319 SLC22A11Q9NSA0 550 aa10.54□□□□□ -0.72
MSH5-212ENST00000467319 STARD5Q9NSY2 213 aa10.54□□□□□ -0.72
MSH5-212ENST00000467319 CUTCQ9NTM9 273 aa10.54□□□□□ -0.72
MSH5-212ENST00000467319 GEMIN8Q9NWZ8 242 aaKnown RBP10.54□□□□□ -0.72
MSH5-212ENST00000467319 TMEM216Q9P0N5 145 aa10.54□□□□□ -0.72
MSH5-212ENST00000467319 DHCR7Q9UBM7 475 aaKnown RBP10.54□□□□□ -0.72
MSH5-212ENST00000467319 EMCNQ9ULC0 261 aa10.54□□□□□ -0.72
MSH5-212ENST00000467319 PADI1Q9ULC6 663 aa10.54□□□□□ -0.72
MSH5-212ENST00000467319 PLAAQ9Y263 795 aa10.54□□□□□ -0.72
MSH5-212ENST00000467319 SEC16AO15027 2179 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 FEZF1A0PJY2 475 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 HYKKA2RU49 373 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 LRRC14BA6NHZ5 514 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 A8MT66 165 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 GOLGA8RI6L899 631 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 E2F3O00716 465 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 CTIFO43310 598 aaKnown RBP10.53□□□□□ -0.72
MSH5-212ENST00000467319 LCMT2O60294 686 aaKnown RBP10.53□□□□□ -0.72
MSH5-212ENST00000467319 GLRA3O75311 464 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 RPS17P08708 135 aaKnown RBP10.53□□□□□ -0.72
MSH5-212ENST00000467319 RAB40ALP0C0E4 278 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 C1GALT1C1LP0DN25 315 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 VARSP26640 1264 aaKnown RBP10.53□□□□□ -0.72
MSH5-212ENST00000467319 GRK3P35626 688 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 AHRP35869 848 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 DLSTP36957 453 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 CASP2P42575 452 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 MEF2AQ02078 507 aaPredicted RBP10.53□□□□□ -0.72
MSH5-212ENST00000467319 SLC18A2Q05940 514 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 SLBPQ14493 270 aaKnown RBP eCLIP10.53□□□□□ -0.72
MSH5-212ENST00000467319 NCF4Q15080 339 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 TBCCQ15814 346 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 MUM1Q2TAK8 710 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 NKAIN1Q4KMZ8 207 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 GARNL3Q5VVW2 1013 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 BROXQ5VW32 411 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 TMEM214Q6NUQ4 689 aaKnown RBP10.53□□□□□ -0.72
MSH5-212ENST00000467319 COX15Q7KZN9 410 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 ASPGQ86U10 573 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 TRABD2AQ86V40 505 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 IQCKQ8N0W5 287 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 DTWD1Q8N5C7 304 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 PTGR2Q8N8N7 351 aaPredicted RBP10.53□□□□□ -0.72
MSH5-212ENST00000467319 SNX31Q8N9S9 440 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 ANKRD53Q8N9V6 530 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 TTC29Q8NA56 475 aaPredicted RBP10.53□□□□□ -0.72
MSH5-212ENST00000467319 STARD8Q92502 1023 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 MR1Q95460 341 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 RERGQ96A58 199 aaPredicted RBP10.53□□□□□ -0.72
MSH5-212ENST00000467319 KIAA1143Q96AT1 154 aaPredicted RBP10.53□□□□□ -0.72
MSH5-212ENST00000467319 FKBP10Q96AY3 582 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 MVB12AQ96EY5 273 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 RUFY1Q96T51 708 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 AIF1LQ9BQI0 150 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 C1QTNF3Q9BXJ4 246 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 CAPS2Q9BXY5 557 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 PITHD1Q9GZP4 211 aaPredicted RBP10.53□□□□□ -0.72
MSH5-212ENST00000467319 CPNE5Q9HCH3 593 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 TXLNGQ9NUQ3 528 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 IRAK4Q9NWZ3 460 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 CPSF2Q9P2I0 782 aaKnown RBP10.53□□□□□ -0.72
MSH5-212ENST00000467319 OPTCQ9UBM4 332 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 IL17BQ9UHF5 180 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 PCTPQ9UKL6 214 aa10.53□□□□□ -0.72
MSH5-212ENST00000467319 MRPS2Q9Y399 296 aaKnown RBP10.53□□□□□ -0.72
MSH5-212ENST00000467319 TXNDC9O14530 226 aa10.52□□□□□ -0.73
MSH5-212ENST00000467319 FOXS1O43638 330 aa10.52□□□□□ -0.73
MSH5-212ENST00000467319 CCNT2O60583 730 aaKnown RBP10.52□□□□□ -0.73
MSH5-212ENST00000467319 CNOT3O75175 753 aaKnown RBP10.52□□□□□ -0.73
MSH5-212ENST00000467319 SMIM24O75264 130 aa10.52□□□□□ -0.73
MSH5-212ENST00000467319 WFS1O76024 890 aa10.52□□□□□ -0.73
MSH5-212ENST00000467319 SIX3O95343 332 aaPredicted RBP10.52□□□□□ -0.73
MSH5-212ENST00000467319 PROCP04070 461 aa10.52□□□□□ -0.73
MSH5-212ENST00000467319 EIF2S1P05198 315 aaKnown RBP10.52□□□□□ -0.73
MSH5-212ENST00000467319 KLK3P07288 261 aaPredicted RBP10.52□□□□□ -0.73
MSH5-212ENST00000467319 SLC35G6P0C7Q6 338 aa10.52□□□□□ -0.73
MSH5-212ENST00000467319 CCNYL3P0C7X3 344 aa10.52□□□□□ -0.73
MSH5-212ENST00000467319 KRT15P19012 456 aa10.52□□□□□ -0.73
MSH5-212ENST00000467319 GSTM2P28161 218 aa10.52□□□□□ -0.73
MSH5-212ENST00000467319 PIK3CGP48736 1102 aa10.52□□□□□ -0.73
MSH5-212ENST00000467319 DCDP81605 110 aaKnown RBP10.52□□□□□ -0.73
MSH5-212ENST00000467319 VAC14Q08AM6 782 aa10.52□□□□□ -0.73
MSH5-212ENST00000467319 IFFO1Q0D2I5 559 aa10.52□□□□□ -0.73
MSH5-212ENST00000467319 PWP1Q13610 501 aa10.52□□□□□ -0.73
MSH5-212ENST00000467319 COL9A2Q14055 689 aaPredicted RBP10.52□□□□□ -0.73
MSH5-212ENST00000467319 FAM53BQ14153 422 aa10.52□□□□□ -0.73
MSH5-212ENST00000467319 DOC2AQ14183 400 aa10.52□□□□□ -0.73
MSH5-212ENST00000467319 COL28A1Q2UY09 1125 aa10.52□□□□□ -0.73
MSH5-212ENST00000467319 FAM214AQ32MH5 1076 aa10.52□□□□□ -0.73
MSH5-212ENST00000467319 CRTC2Q53ET0 693 aaPredicted RBP10.52□□□□□ -0.73
MSH5-212ENST00000467319 C1orf189Q5VU69 101 aa10.52□□□□□ -0.73
MSH5-212ENST00000467319 FAM199XQ6PEV8 388 aaPredicted RBP10.52□□□□□ -0.73
MSH5-212ENST00000467319 TTLL10Q6ZVT0 673 aa10.52□□□□□ -0.73
MSH5-212ENST00000467319 VN1R5Q7Z5H4 357 aa10.52□□□□□ -0.73
MSH5-212ENST00000467319 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.52□□□□□ -0.73
MSH5-212ENST00000467319 AFAP1L2Q8N4X5 818 aa10.52□□□□□ -0.73
MSH5-212ENST00000467319 CAMKVQ8NCB2 501 aa10.52□□□□□ -0.73
MSH5-212ENST00000467319 NT5CQ8TCD5 201 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms