RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 SEMA4BQ9NPR2 832 aaPredicted RBP15.3■□□□□ 0.04
GPC1-207ENST00000466624 ZFP69BQ9UJL9 534 aa15.3■□□□□ 0.04
GPC1-207ENST00000466624 TSC22D4Q9Y3Q8 395 aa15.3■□□□□ 0.04
GPC1-207ENST00000466624 PCDHB3Q9Y5E6 796 aa15.3■□□□□ 0.04
GPC1-207ENST00000466624 AP1M2Q9Y6Q5 423 aa15.3■□□□□ 0.04
GPC1-207ENST00000466624 TRABD2BA6NFA1 517 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 CDRT15L2A8MXV6 281 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 C9orf172C9J069 976 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 H0YGG7 62 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 AGRPO00253 132 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 OR1F1O43749 312 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 LCMT2O60294 686 aaKnown RBP15.29■□□□□ 0.04
GPC1-207ENST00000466624 NPHS1O60500 1241 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 OR2B3O76000 313 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 CLDN9O95484 217 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 SPINK2P20155 84 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 SERPINB1P30740 379 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 EMP3P54852 163 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 CDH13P55290 713 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 PKNOX1P55347 436 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 ARF3P61204 181 aaPredicted RBP15.29■□□□□ 0.04
GPC1-207ENST00000466624 MEF2AQ02078 507 aaPredicted RBP15.29■□□□□ 0.04
GPC1-207ENST00000466624 CYP4F3Q08477 520 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 GALNT1Q10472 559 aaPredicted RBP15.29■□□□□ 0.04
GPC1-207ENST00000466624 GPS2Q13227 327 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 RBBP7Q16576 425 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 HSP90B2PQ58FF3 399 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 MANEAQ5SRI9 462 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 HHATQ5VTY9 493 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 YOD1Q5VVQ6 348 aaPredicted RBP15.29■□□□□ 0.04
GPC1-207ENST00000466624 FOXR1Q6PIV2 292 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 RPS27LQ71UM5 84 aaKnown RBP15.29■□□□□ 0.04
GPC1-207ENST00000466624 VN1R4Q7Z5H5 301 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 PLD3Q8IV08 490 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 NUDCD3Q8IVD9 361 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 LAS2Q8IYD9 372 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 CCNYL1Q8N7R7 359 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 ANKRD42Q8N9B4 389 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 ZNF740Q8NDX6 193 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 TRPV3Q8NET8 790 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 OR52B6Q8NGF0 335 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 TRPC4APQ8TEL6 797 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 USP7Q93009 1102 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 TM4SF19Q96DZ7 209 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 CNDP1Q96KN2 507 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 DRC3Q9H069 523 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 SYNPO2LQ9H987 977 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 ASCL3Q9NQ33 180 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 TRPS1Q9UHF7 1281 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 ADGRE2Q9UHX3 823 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 ACSL6Q9UKU0 697 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 ANGPTL2Q9UKU9 493 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 B3GALT1Q9Y5Z6 326 aa15.29■□□□□ 0.04
GPC1-207ENST00000466624 LOC105369274A0A096LPK9 316 aa15.28■□□□□ 0.04
GPC1-207ENST00000466624 LOC102723532A0A0G2JNH3 316 aa15.28■□□□□ 0.04
GPC1-207ENST00000466624 H0YIV9 168 aa15.28■□□□□ 0.04
GPC1-207ENST00000466624 ZSCAN9O15535 394 aaPredicted RBP15.28■□□□□ 0.04
GPC1-207ENST00000466624 CD82P27701 267 aa15.28■□□□□ 0.04
GPC1-207ENST00000466624 HPDP32754 393 aaPredicted RBP15.28■□□□□ 0.04
GPC1-207ENST00000466624 GCGRP47871 477 aa15.28■□□□□ 0.04
GPC1-207ENST00000466624 WDR4P57081 412 aaKnown RBP15.28■□□□□ 0.04
GPC1-207ENST00000466624 VSX2P58304 361 aaPredicted RBP15.28■□□□□ 0.04
GPC1-207ENST00000466624 ERVPABLB-1P60509 514 aa15.28■□□□□ 0.04
GPC1-207ENST00000466624 PPP2R2AP63151 447 aa15.28■□□□□ 0.04
GPC1-207ENST00000466624 PWP1Q13610 501 aa15.28■□□□□ 0.04
GPC1-207ENST00000466624 GRM7Q14831 915 aa15.28■□□□□ 0.04
GPC1-207ENST00000466624 PRTGQ2VWP7 1150 aa15.28■□□□□ 0.04
GPC1-207ENST00000466624 WASHC2DQ5SRD0 308 aa15.28■□□□□ 0.04
GPC1-207ENST00000466624 C10orf62Q5T681 223 aaPredicted RBP15.28■□□□□ 0.04
GPC1-207ENST00000466624 MED27Q6P2C8 311 aa15.28■□□□□ 0.04
GPC1-207ENST00000466624 MILR1Q7Z6M3 343 aa15.28■□□□□ 0.04
GPC1-207ENST00000466624 ASPGQ86U10 573 aa15.28■□□□□ 0.04
GPC1-207ENST00000466624 HOMEZQ8IX15 550 aa15.28■□□□□ 0.04
GPC1-207ENST00000466624 OR4N4Q8N0Y3 316 aa15.28■□□□□ 0.04
GPC1-207ENST00000466624 ANKRD53Q8N9V6 530 aa15.28■□□□□ 0.04
GPC1-207ENST00000466624 CAMKVQ8NCB2 501 aa15.28■□□□□ 0.04
GPC1-207ENST00000466624 OR4F6Q8NGB9 312 aa15.28■□□□□ 0.04
GPC1-207ENST00000466624 REPS1Q96D71 796 aa15.28■□□□□ 0.04
GPC1-207ENST00000466624 CTRCQ99895 268 aa15.28■□□□□ 0.04
GPC1-207ENST00000466624 NLNQ9BYT8 704 aa15.28■□□□□ 0.04
GPC1-207ENST00000466624 RHBGQ9H310 441 aa15.28■□□□□ 0.04
GPC1-207ENST00000466624 ZNF490Q9ULM2 529 aaPredicted RBP15.28■□□□□ 0.04
GPC1-207ENST00000466624 SRPK3Q9UPE1 567 aa15.28■□□□□ 0.04
GPC1-207ENST00000466624 PCDHGA11Q9Y5H2 935 aa15.28■□□□□ 0.04
GPC1-207ENST00000466624 SDK2Q58EX2 2172 aa15.27■□□□□ 0.04
GPC1-207ENST00000466624 PPP6CO00743 305 aa15.27■□□□□ 0.04
GPC1-207ENST00000466624 SCRG1O75711 98 aa15.27■□□□□ 0.04
GPC1-207ENST00000466624 SNUPNO95149 360 aaKnown RBP15.27■□□□□ 0.04
GPC1-207ENST00000466624 ESRRBO95718 433 aa15.27■□□□□ 0.04
GPC1-207ENST00000466624 ENO1P06733 434 aaKnown RBP15.27■□□□□ 0.04
GPC1-207ENST00000466624 HBQ1P09105 142 aa15.27■□□□□ 0.04
GPC1-207ENST00000466624 SLC35G6P0C7Q6 338 aa15.27■□□□□ 0.04
GPC1-207ENST00000466624 ARSFP54793 590 aa15.27■□□□□ 0.04
GPC1-207ENST00000466624 RBBP5Q15291 538 aaKnown RBP15.27■□□□□ 0.04
GPC1-207ENST00000466624 FAM214AQ32MH5 1076 aa15.27■□□□□ 0.04
GPC1-207ENST00000466624 GARNL3Q5VVW2 1013 aa15.27■□□□□ 0.04
GPC1-207ENST00000466624 PWWP2BQ6NUJ5 590 aa15.27■□□□□ 0.04
GPC1-207ENST00000466624 GPRIN3Q6ZVF9 776 aa15.27■□□□□ 0.04
GPC1-207ENST00000466624 TMEM126BQ8IUX1 230 aa15.27■□□□□ 0.04
GPC1-207ENST00000466624 CSNK1A1LQ8N752 337 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms