RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 YOD1Q5VVQ6 348 aaPredicted RBP13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 RHBDD2Q6NTF9 364 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 VN1R4Q7Z5H5 301 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 ASPGQ86U10 573 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 PROSER1Q86XN7 944 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 CACNA2D3Q8IZS8 1091 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 ESX1Q8N693 406 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 CAMKVQ8NCB2 501 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 TCP10LQ8TDR4 215 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 KCNE4Q8WWG9 221 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 NKD1Q969G9 470 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 CCDC126Q96EE4 140 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 LRFN5Q96NI6 719 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 NSUN5Q96P11 429 aaKnown RBP13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 EFCAB11Q9BUY7 163 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 C1QTNF3Q9BXJ4 246 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 ERVK-6Q9BXR3 956 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 NLNQ9BYT8 704 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 STMN4Q9H169 189 aaPredicted RBP13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 NT5DC2Q9H857 520 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 NOL11Q9H8H0 719 aaKnown RBP13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 IPPKQ9H8X2 491 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 TMBIM4Q9HC24 238 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 CUTCQ9NTM9 273 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 TXLNGQ9NUQ3 528 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 SLC17A7Q9P2U7 560 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 ZFP69BQ9UJL9 534 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 MID2Q9UJV3 735 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 RAXQ9Y2V3 346 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 AKAP13Q12802 2813 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 SPTBP11277 2137 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 SDK2Q58EX2 2172 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 UQCRHLA0A096LP55 91 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 AGPSO00116 658 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 MEN1O00255 615 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 P2RX6O15547 441 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 TYROBPO43914 113 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 WFS1O76024 890 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 SUPT7LO94864 414 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 STATHP02808 62 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 KLK3P07288 261 aaPredicted RBP13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 UQCRHP07919 91 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 CD22P20273 847 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 IMPDH1P20839 514 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 RORAP35398 523 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 AHRP35869 848 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 EIF2S3P41091 472 aaKnown RBP13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 ATP1A2P50993 1020 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 GPS2Q13227 327 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 CLN3Q13286 438 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 COL9A2Q14055 689 aaPredicted RBP13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 E2F2Q14209 437 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 HIST2H2ACQ16777 129 aaPredicted RBP13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 HKDC1Q2TB90 917 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 UNC50Q53HI1 259 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 PAGE2BQ5JRK9 111 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 HIST2H2AA3Q6FI13 130 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 TMIGD1Q6UXZ0 262 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 TTLL10Q6ZVT0 673 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 IL22RA1Q8N6P7 574 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 ANKRD53Q8N9V6 530 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 ARMC2Q8NEN0 867 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 PPP4R1Q8TF05 950 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 ZNF483Q8TF39 744 aaPredicted RBP13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 SLC13A3Q8WWT9 602 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 ATP6V1E2Q96A05 226 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 TM4SF19Q96DZ7 209 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 CNTNAP3BQ96NU0 1288 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 FAM111AQ96PZ2 611 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 TMEM237Q96Q45 408 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 CNTNAP3Q9BZ76 1288 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 DPH1Q9BZG8 443 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 PITHD1Q9GZP4 211 aaPredicted RBP13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 ACTR8Q9H981 624 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 ZBTB26Q9HCK0 441 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 SSU72Q9NP77 194 aaKnown RBP13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 LHX9Q9NQ69 397 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 WDR70Q9NW82 654 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 COPG2Q9UBF2 871 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 DHCR7Q9UBM7 475 aaKnown RBP13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 PADI1Q9ULC6 663 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 RUVBL1Q9Y265 456 aaKnown RBP13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 ACTL7BQ9Y614 415 aa13.79□□□□□ -0.2
DNMT3A-208ENST00000466601 MDC1Q14676 2089 aaKnown RBP13.78□□□□□ -0.2
DNMT3A-208ENST00000466601 OR7A17O14581 309 aa13.78□□□□□ -0.2
DNMT3A-208ENST00000466601 RRP8O43159 456 aaKnown RBP13.78□□□□□ -0.2
DNMT3A-208ENST00000466601 KLK10O43240 276 aa13.78□□□□□ -0.2
DNMT3A-208ENST00000466601 SLC35G6P0C7Q6 338 aa13.78□□□□□ -0.2
DNMT3A-208ENST00000466601 ALAS2P22557 587 aa13.78□□□□□ -0.2
DNMT3A-208ENST00000466601 HNF4AP41235 474 aa13.78□□□□□ -0.2
DNMT3A-208ENST00000466601 EMP3P54852 163 aa13.78□□□□□ -0.2
DNMT3A-208ENST00000466601 CDH13P55290 713 aa13.78□□□□□ -0.2
DNMT3A-208ENST00000466601 DNAJB13P59910 316 aa13.78□□□□□ -0.2
DNMT3A-208ENST00000466601 CYP4F2P78329 520 aa13.78□□□□□ -0.2
DNMT3A-208ENST00000466601 CLCQ05315 142 aa13.78□□□□□ -0.2
DNMT3A-208ENST00000466601 ABHD18Q0P651 414 aa13.78□□□□□ -0.2
DNMT3A-208ENST00000466601 MUM1Q2TAK8 710 aa13.78□□□□□ -0.2
DNMT3A-208ENST00000466601 MANEAQ5SRI9 462 aa13.78□□□□□ -0.2
DNMT3A-208ENST00000466601 C1orf189Q5VU69 101 aa13.78□□□□□ -0.2
DNMT3A-208ENST00000466601 GARNL3Q5VVW2 1013 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms