RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 TCP1P17987 556 aaKnown RBP16.61■□□□□ 0.25
COL7A1-206ENST00000466591 IL1RNP18510 177 aa16.61■□□□□ 0.25
COL7A1-206ENST00000466591 ZNF33BQ06732 778 aa16.61■□□□□ 0.25
COL7A1-206ENST00000466591 HP1BP3Q5SSJ5 553 aaPredicted RBP16.61■□□□□ 0.25
COL7A1-206ENST00000466591 PAQR3Q6TCH7 311 aa16.61■□□□□ 0.25
COL7A1-206ENST00000466591 CYHR1Q6ZMK1 362 aa16.61■□□□□ 0.25
COL7A1-206ENST00000466591 KIAA0408Q6ZU52 694 aa16.61■□□□□ 0.25
COL7A1-206ENST00000466591 ZC3H7AQ8IWR0 971 aaKnown RBP16.61■□□□□ 0.25
COL7A1-206ENST00000466591 AMER3Q8N944 861 aa16.61■□□□□ 0.25
COL7A1-206ENST00000466591 CATSPER1Q8NEC5 780 aa16.61■□□□□ 0.25
COL7A1-206ENST00000466591 FAR1Q8WVX9 515 aa16.61■□□□□ 0.25
COL7A1-206ENST00000466591 CERS2Q96G23 380 aa16.61■□□□□ 0.25
COL7A1-206ENST00000466591 CAPZA3Q96KX2 299 aa16.61■□□□□ 0.25
COL7A1-206ENST00000466591 MESP1Q9BRJ9 268 aa16.61■□□□□ 0.25
COL7A1-206ENST00000466591 TUBB6Q9BUF5 446 aa16.61■□□□□ 0.25
COL7A1-206ENST00000466591 FAM129AQ9BZQ8 928 aa16.61■□□□□ 0.25
COL7A1-206ENST00000466591 PLA2G3Q9NZ20 509 aa16.61■□□□□ 0.25
COL7A1-206ENST00000466591 ABI3Q9P2A4 366 aa16.61■□□□□ 0.25
COL7A1-206ENST00000466591 ADAMTS6Q9UKP5 1117 aa16.61■□□□□ 0.25
COL7A1-206ENST00000466591 PDE10AQ9Y233 779 aa16.61■□□□□ 0.25
COL7A1-206ENST00000466591 MED16Q9Y2X0 877 aa16.61■□□□□ 0.25
COL7A1-206ENST00000466591 NEU2Q9Y3R4 380 aa16.61■□□□□ 0.25
COL7A1-206ENST00000466591 FEZF1A0PJY2 475 aa16.6■□□□□ 0.25
COL7A1-206ENST00000466591 SGK494L7N484 410 aa16.6■□□□□ 0.25
COL7A1-206ENST00000466591 CES2O00748 559 aa16.6■□□□□ 0.25
COL7A1-206ENST00000466591 FOXS1O43638 330 aa16.6■□□□□ 0.25
COL7A1-206ENST00000466591 BANF1O75531 89 aa16.6■□□□□ 0.25
COL7A1-206ENST00000466591 CDH1P12830 882 aa16.6■□□□□ 0.25
COL7A1-206ENST00000466591 SAT1P21673 171 aa16.6■□□□□ 0.25
COL7A1-206ENST00000466591 XCR1P46094 333 aa16.6■□□□□ 0.25
COL7A1-206ENST00000466591 ACTN3Q08043 901 aaPredicted RBP16.6■□□□□ 0.25
COL7A1-206ENST00000466591 BTBD16Q32M84 506 aa16.6■□□□□ 0.25
COL7A1-206ENST00000466591 MBOAT1Q6ZNC8 495 aa16.6■□□□□ 0.25
COL7A1-206ENST00000466591 KLHL7Q8IXQ5 586 aa16.6■□□□□ 0.25
COL7A1-206ENST00000466591 OR51Q1Q8NH59 317 aa16.6■□□□□ 0.25
COL7A1-206ENST00000466591 SLC13A3Q8WWT9 602 aa16.6■□□□□ 0.25
COL7A1-206ENST00000466591 ATL1Q8WXF7 558 aa16.6■□□□□ 0.25
COL7A1-206ENST00000466591 RUNDC3BQ96NL0 473 aa16.6■□□□□ 0.25
COL7A1-206ENST00000466591 MACROD1Q9BQ69 325 aa16.6■□□□□ 0.25
COL7A1-206ENST00000466591 ZNF700Q9H0M5 742 aa16.6■□□□□ 0.25
COL7A1-206ENST00000466591 PRM3Q9NNZ6 103 aa16.6■□□□□ 0.25
COL7A1-206ENST00000466591 CHMP2BQ9UQN3 213 aa16.6■□□□□ 0.25
COL7A1-206ENST00000466591 NDUFS4O43181 175 aa16.59■□□□□ 0.25
COL7A1-206ENST00000466591 LRRTM2O43300 516 aa16.59■□□□□ 0.25
COL7A1-206ENST00000466591 OR1F1O43749 312 aa16.59■□□□□ 0.25
COL7A1-206ENST00000466591 SEC24DO94855 1032 aaPredicted RBP16.59■□□□□ 0.25
COL7A1-206ENST00000466591 NSA2O95478 260 aaKnown RBP16.59■□□□□ 0.25
COL7A1-206ENST00000466591 GUCA1CO95843 209 aa16.59■□□□□ 0.25
COL7A1-206ENST00000466591 RNF224P0DH78 156 aa16.59■□□□□ 0.25
COL7A1-206ENST00000466591 CCR8P51685 355 aa16.59■□□□□ 0.25
COL7A1-206ENST00000466591 RGS1Q08116 209 aa16.59■□□□□ 0.25
COL7A1-206ENST00000466591 RBM20Q5T481 1227 aaKnown RBP16.59■□□□□ 0.25
COL7A1-206ENST00000466591 SPNS2Q8IVW8 549 aa16.59■□□□□ 0.25
COL7A1-206ENST00000466591 LRRC56Q8IYG6 542 aaPredicted RBP16.59■□□□□ 0.25
COL7A1-206ENST00000466591 AGGF1Q8N302 714 aaeCLIP16.59■□□□□ 0.25
COL7A1-206ENST00000466591 ZFATQ9P243 1243 aa16.59■□□□□ 0.25
COL7A1-206ENST00000466591 DYRK1BQ9Y463 629 aa16.59■□□□□ 0.25
COL7A1-206ENST00000466591 MAST4O15021 2626 aa16.59■□□□□ 0.25
COL7A1-206ENST00000466591 KCNE1BA0A087WTH5 132 aa16.58■□□□□ 0.24
COL7A1-206ENST00000466591 LDLRP01130 860 aa16.58■□□□□ 0.24
COL7A1-206ENST00000466591 CELA2AP08217 269 aa16.58■□□□□ 0.24
COL7A1-206ENST00000466591 ITGAMP11215 1152 aa16.58■□□□□ 0.24
COL7A1-206ENST00000466591 AGTR2P50052 363 aa16.58■□□□□ 0.24
COL7A1-206ENST00000466591 TNFSF10P50591 281 aa16.58■□□□□ 0.24
COL7A1-206ENST00000466591 CDKN2DP55273 166 aa16.58■□□□□ 0.24
COL7A1-206ENST00000466591 AP1S2P56377 157 aa16.58■□□□□ 0.24
COL7A1-206ENST00000466591 CSNK1G2P78368 415 aa16.58■□□□□ 0.24
COL7A1-206ENST00000466591 DR1Q01658 176 aa16.58■□□□□ 0.24
COL7A1-206ENST00000466591 CSHL1Q14406 222 aa16.58■□□□□ 0.24
COL7A1-206ENST00000466591 MORF4L2Q15014 288 aa16.58■□□□□ 0.24
COL7A1-206ENST00000466591 INAQ16352 499 aa16.58■□□□□ 0.24
COL7A1-206ENST00000466591 HECTD2Q5U5R9 776 aa16.58■□□□□ 0.24
COL7A1-206ENST00000466591 FAM45BPQ6NSW5 357 aa16.58■□□□□ 0.24
COL7A1-206ENST00000466591 HIBCHQ6NVY1 386 aaPredicted RBP16.58■□□□□ 0.24
COL7A1-206ENST00000466591 LCTLQ6UWM7 567 aa16.58■□□□□ 0.24
COL7A1-206ENST00000466591 SYDE1Q6ZW31 735 aaPredicted RBP16.58■□□□□ 0.24
COL7A1-206ENST00000466591 CPEB2Q7Z5Q1 589 aaKnown RBP16.58■□□□□ 0.24
COL7A1-206ENST00000466591 FAM45AQ8TCE6 357 aa16.58■□□□□ 0.24
COL7A1-206ENST00000466591 RBCK1Q9BYM8 510 aa16.58■□□□□ 0.24
COL7A1-206ENST00000466591 VN1R1Q9GZP7 353 aa16.58■□□□□ 0.24
COL7A1-206ENST00000466591 SYNPO2LQ9H987 977 aa16.58■□□□□ 0.24
COL7A1-206ENST00000466591 KCNK13Q9HB14 408 aa16.58■□□□□ 0.24
COL7A1-206ENST00000466591 STMN3Q9NZ72 180 aa16.58■□□□□ 0.24
COL7A1-206ENST00000466591 CORO1CQ9ULV4 474 aaPredicted RBP16.58■□□□□ 0.24
COL7A1-206ENST00000466591 NAALAD2Q9Y3Q0 740 aa16.58■□□□□ 0.24
COL7A1-206ENST00000466591 IGHV3-20A0A0C4DH32 117 aa16.57■□□□□ 0.24
COL7A1-206ENST00000466591 RDH16O75452 317 aa16.57■□□□□ 0.24
COL7A1-206ENST00000466591 JRKO75564 520 aa16.57■□□□□ 0.24
COL7A1-206ENST00000466591 CDC123O75794 336 aaPredicted RBP16.57■□□□□ 0.24
COL7A1-206ENST00000466591 RASAL1O95294 804 aa16.57■□□□□ 0.24
COL7A1-206ENST00000466591 CRYABP02511 175 aaKnown RBP16.57■□□□□ 0.24
COL7A1-206ENST00000466591 AHSGP02765 367 aa16.57■□□□□ 0.24
COL7A1-206ENST00000466591 BCL6P41182 706 aa16.57■□□□□ 0.24
COL7A1-206ENST00000466591 PAFAH1B1P43034 410 aa16.57■□□□□ 0.24
COL7A1-206ENST00000466591 ARL4CP56559 192 aa16.57■□□□□ 0.24
COL7A1-206ENST00000466591 HERC3Q15034 1050 aa16.57■□□□□ 0.24
COL7A1-206ENST00000466591 PCOLCEQ15113 449 aa16.57■□□□□ 0.24
COL7A1-206ENST00000466591 DUPD1Q68J44 220 aa16.57■□□□□ 0.24
COL7A1-206ENST00000466591 TMEM214Q6NUQ4 689 aaKnown RBP16.57■□□□□ 0.24
COL7A1-206ENST00000466591 RPUSD3Q6P087 351 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms