RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 KCNK13Q9HB14 408 aa12.84□□□□□ -0.35
ATF3-208ENST00000465155 KLK4Q9Y5K2 254 aa12.84□□□□□ -0.35
ATF3-208ENST00000465155 MN1Q10571 1320 aaPredicted RBP12.84□□□□□ -0.35
ATF3-208ENST00000465155 IGHV5-51A0A0C4DH38 117 aa12.84□□□□□ -0.35
ATF3-208ENST00000465155 SNX3O60493 162 aa12.84□□□□□ -0.35
ATF3-208ENST00000465155 CPNE6O95741 557 aa12.84□□□□□ -0.35
ATF3-208ENST00000465155 GP1BAP07359 652 aa12.84□□□□□ -0.35
ATF3-208ENST00000465155 EZRP15311 586 aaKnown RBP12.84□□□□□ -0.35
ATF3-208ENST00000465155 BCL6P41182 706 aa12.84□□□□□ -0.35
ATF3-208ENST00000465155 CYP4F3Q08477 520 aa12.84□□□□□ -0.35
ATF3-208ENST00000465155 SQSTM1Q13501 440 aa12.84□□□□□ -0.35
ATF3-208ENST00000465155 ZIC1Q15915 447 aa12.84□□□□□ -0.35
ATF3-208ENST00000465155 SLC9B1Q4ZJI4 515 aa12.84□□□□□ -0.35
ATF3-208ENST00000465155 CACHD1Q5VU97 1274 aa12.84□□□□□ -0.35
ATF3-208ENST00000465155 TMEM71Q6P5X7 295 aa12.84□□□□□ -0.35
ATF3-208ENST00000465155 EPGNQ6UW88 154 aa12.84□□□□□ -0.35
ATF3-208ENST00000465155 TMPRSS9Q7Z410 1059 aa12.84□□□□□ -0.35
ATF3-208ENST00000465155 HOMEZQ8IX15 550 aa12.84□□□□□ -0.35
ATF3-208ENST00000465155 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.84□□□□□ -0.35
ATF3-208ENST00000465155 ANKRD53Q8N9V6 530 aa12.84□□□□□ -0.35
ATF3-208ENST00000465155 HUS1BQ8NHY5 278 aa12.84□□□□□ -0.35
ATF3-208ENST00000465155 C3orf30Q96M34 536 aa12.84□□□□□ -0.35
ATF3-208ENST00000465155 FCRL4Q96PJ5 515 aa12.84□□□□□ -0.35
ATF3-208ENST00000465155 CDC6Q99741 560 aa12.84□□□□□ -0.35
ATF3-208ENST00000465155 EBF4Q9BQW3 602 aa12.84□□□□□ -0.35
ATF3-208ENST00000465155 TMEM120AQ9BXJ8 343 aa12.84□□□□□ -0.35
ATF3-208ENST00000465155 WDR55Q9H6Y2 383 aaPredicted RBP12.84□□□□□ -0.35
ATF3-208ENST00000465155 NT5DC2Q9H857 520 aa12.84□□□□□ -0.35
ATF3-208ENST00000465155 MEAF6Q9HAF1 191 aa12.84□□□□□ -0.35
ATF3-208ENST00000465155 GOLGA8QA0A0J9YX86 632 aa12.83□□□□□ -0.36
ATF3-208ENST00000465155 ATP6AP2A0A1C7CYW4 349 aa12.83□□□□□ -0.36
ATF3-208ENST00000465155 GOLGA8OA6NCC3 632 aa12.83□□□□□ -0.36
ATF3-208ENST00000465155 ANKDD1BA6NHY2 528 aa12.83□□□□□ -0.36
ATF3-208ENST00000465155 A8MU76 341 aa12.83□□□□□ -0.36
ATF3-208ENST00000465155 GOLGA8NF8WBI6 632 aa12.83□□□□□ -0.36
ATF3-208ENST00000465155 NDUFAB1O14561 156 aa12.83□□□□□ -0.36
ATF3-208ENST00000465155 CTSVO60911 334 aa12.83□□□□□ -0.36
ATF3-208ENST00000465155 ATP6AP2O75787 350 aa12.83□□□□□ -0.36
ATF3-208ENST00000465155 EPHA3P29320 983 aa12.83□□□□□ -0.36
ATF3-208ENST00000465155 SCTRP47872 440 aa12.83□□□□□ -0.36
ATF3-208ENST00000465155 ACADVLP49748 655 aa12.83□□□□□ -0.36
ATF3-208ENST00000465155 IDH3AP50213 366 aa12.83□□□□□ -0.36
ATF3-208ENST00000465155 ARFIP2P53365 341 aa12.83□□□□□ -0.36
ATF3-208ENST00000465155 INHBCP55103 352 aa12.83□□□□□ -0.36
ATF3-208ENST00000465155 RPS15AP62244 130 aaKnown RBP12.83□□□□□ -0.36
ATF3-208ENST00000465155 CYP4F2P78329 520 aa12.83□□□□□ -0.36
ATF3-208ENST00000465155 PHEXP78562 749 aa12.83□□□□□ -0.36
ATF3-208ENST00000465155 ZNF574Q6ZN55 896 aaPredicted RBP12.83□□□□□ -0.36
ATF3-208ENST00000465155 PIGWQ7Z7B1 504 aa12.83□□□□□ -0.36
ATF3-208ENST00000465155 ZNF473Q8WTR7 871 aaKnown RBP12.83□□□□□ -0.36
ATF3-208ENST00000465155 GFM1Q96RP9 751 aaKnown RBP12.83□□□□□ -0.36
ATF3-208ENST00000465155 CCT7Q99832 543 aa12.83□□□□□ -0.36
ATF3-208ENST00000465155 SARGQ9BW04 601 aa12.83□□□□□ -0.36
ATF3-208ENST00000465155 PFDN4Q9NQP4 134 aa12.83□□□□□ -0.36
ATF3-208ENST00000465155 SOHLH2Q9NX45 425 aa12.83□□□□□ -0.36
ATF3-208ENST00000465155 RAPGEFL1Q9UHV5 662 aa12.83□□□□□ -0.36
ATF3-208ENST00000465155 SPEGQ15772 3267 aa12.82□□□□□ -0.36
ATF3-208ENST00000465155 A0A0J9YVX5 310 aa12.82□□□□□ -0.36
ATF3-208ENST00000465155 MAGEB17A8MXT2 336 aa12.82□□□□□ -0.36
ATF3-208ENST00000465155 SLC28A1O00337 649 aa12.82□□□□□ -0.36
ATF3-208ENST00000465155 SDHDO14521 159 aa12.82□□□□□ -0.36
ATF3-208ENST00000465155 ZBTB11O95625 1053 aaPredicted RBP12.82□□□□□ -0.36
ATF3-208ENST00000465155 SERPIND1P05546 499 aa12.82□□□□□ -0.36
ATF3-208ENST00000465155 SEPHS1P49903 392 aa12.82□□□□□ -0.36
ATF3-208ENST00000465155 HMGCS1Q01581 520 aa12.82□□□□□ -0.36
ATF3-208ENST00000465155 IMPG1Q17R60 797 aa12.82□□□□□ -0.36
ATF3-208ENST00000465155 XKR7Q5GH72 579 aa12.82□□□□□ -0.36
ATF3-208ENST00000465155 C10orf62Q5T681 223 aaPredicted RBP12.82□□□□□ -0.36
ATF3-208ENST00000465155 GKAP1Q5VSY0 366 aaPredicted RBP12.82□□□□□ -0.36
ATF3-208ENST00000465155 FBXO42Q6P3S6 717 aa12.82□□□□□ -0.36
ATF3-208ENST00000465155 RNF165Q6ZSG1 346 aa12.82□□□□□ -0.36
ATF3-208ENST00000465155 TRIM46Q7Z4K8 759 aa12.82□□□□□ -0.36
ATF3-208ENST00000465155 VN1R5Q7Z5H4 357 aa12.82□□□□□ -0.36
ATF3-208ENST00000465155 CARFQ8N187 725 aa12.82□□□□□ -0.36
ATF3-208ENST00000465155 TTLQ8NG68 377 aa12.82□□□□□ -0.36
ATF3-208ENST00000465155 OR4D9Q8NGE8 314 aa12.82□□□□□ -0.36
ATF3-208ENST00000465155 OR2T11Q8NH01 316 aa12.82□□□□□ -0.36
ATF3-208ENST00000465155 C10orf82Q8WW14 230 aa12.82□□□□□ -0.36
ATF3-208ENST00000465155 TCTN2Q96GX1 697 aa12.82□□□□□ -0.36
ATF3-208ENST00000465155 DPYSL5Q9BPU6 564 aa12.82□□□□□ -0.36
ATF3-208ENST00000465155 ZFYVE21Q9BQ24 234 aa12.82□□□□□ -0.36
ATF3-208ENST00000465155 ACPTQ9BZG2 426 aa12.82□□□□□ -0.36
ATF3-208ENST00000465155 RHBGQ9H310 441 aa12.82□□□□□ -0.36
ATF3-208ENST00000465155 SYNPO2LQ9H987 977 aa12.82□□□□□ -0.36
ATF3-208ENST00000465155 FAM60AQ9NP50 221 aa12.82□□□□□ -0.36
ATF3-208ENST00000465155 ADGRE2Q9UHX3 823 aa12.82□□□□□ -0.36
ATF3-208ENST00000465155 ZFP69BQ9UJL9 534 aa12.82□□□□□ -0.36
ATF3-208ENST00000465155 PILRAQ9UKJ1 303 aa12.82□□□□□ -0.36
ATF3-208ENST00000465155 TSC22D4Q9Y3Q8 395 aa12.82□□□□□ -0.36
ATF3-208ENST00000465155 PCDHGA4Q9Y5G9 962 aa12.82□□□□□ -0.36
ATF3-208ENST00000465155 SERTM1A2A2V5 107 aa12.81□□□□□ -0.36
ATF3-208ENST00000465155 FOXE1O00358 373 aaPredicted RBP12.81□□□□□ -0.36
ATF3-208ENST00000465155 NTN3O00634 580 aaPredicted RBP12.81□□□□□ -0.36
ATF3-208ENST00000465155 RGS14O43566 566 aa12.81□□□□□ -0.36
ATF3-208ENST00000465155 SH3BGRLO75368 114 aa12.81□□□□□ -0.36
ATF3-208ENST00000465155 TGFB1P01137 390 aa12.81□□□□□ -0.36
ATF3-208ENST00000465155 STATHP02808 62 aa12.81□□□□□ -0.36
ATF3-208ENST00000465155 SERPINB1P30740 379 aa12.81□□□□□ -0.36
ATF3-208ENST00000465155 AHRP35869 848 aa12.81□□□□□ -0.36
ATF3-208ENST00000465155 PIK3CBP42338 1070 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms