RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 ZNF559Q9BR84 538 aa4.19□□□□□ -1.74
USP25-207ENST00000464435 SLC39A8Q9C0K1 460 aa4.19□□□□□ -1.74
USP25-207ENST00000464435 TMEM161AQ9NX61 479 aa4.19□□□□□ -1.74
USP25-207ENST00000464435 OR6C2Q9NZP2 312 aa4.19□□□□□ -1.74
USP25-207ENST00000464435 FBXL5Q9UKA1 691 aa4.19□□□□□ -1.74
USP25-207ENST00000464435 PA2G4Q9UQ80 394 aaKnown RBP4.19□□□□□ -1.74
USP25-207ENST00000464435 NSG2Q9Y328 171 aa4.19□□□□□ -1.74
USP25-207ENST00000464435 ILVBLA1L0T0 632 aa4.18□□□□□ -1.74
USP25-207ENST00000464435 MTMR11A4FU01 709 aa4.18□□□□□ -1.74
USP25-207ENST00000464435 SDR42E2A6NKP2 422 aa4.18□□□□□ -1.74
USP25-207ENST00000464435 SNURFLB1AK76 121 aa4.18□□□□□ -1.74
USP25-207ENST00000464435 ERVV-2B6SEH9 535 aa4.18□□□□□ -1.74
USP25-207ENST00000464435 CLPTM1O96005 669 aa4.18□□□□□ -1.74
USP25-207ENST00000464435 PRSS1P07477 247 aa4.18□□□□□ -1.74
USP25-207ENST00000464435 C8orf89P0DMQ9 161 aa4.18□□□□□ -1.74
USP25-207ENST00000464435 SFTPDP35247 375 aa4.18□□□□□ -1.74
USP25-207ENST00000464435 UBXN1Q04323 297 aa4.18□□□□□ -1.74
USP25-207ENST00000464435 ACTN3Q08043 901 aaPredicted RBP4.18□□□□□ -1.74
USP25-207ENST00000464435 AP1B1Q10567 949 aa4.18□□□□□ -1.74
USP25-207ENST00000464435 MORF4L2Q15014 288 aa4.18□□□□□ -1.74
USP25-207ENST00000464435 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.18□□□□□ -1.74
USP25-207ENST00000464435 KLHL10Q6JEL2 608 aa4.18□□□□□ -1.74
USP25-207ENST00000464435 FAM53AQ6NSI3 398 aaPredicted RBP4.18□□□□□ -1.74
USP25-207ENST00000464435 PLBD1Q6P4A8 553 aa4.18□□□□□ -1.74
USP25-207ENST00000464435 TRMT1LQ7Z2T5 733 aaKnown RBP4.18□□□□□ -1.74
USP25-207ENST00000464435 CPEB2Q7Z5Q1 589 aaKnown RBP4.18□□□□□ -1.74
USP25-207ENST00000464435 GPR141Q7Z602 305 aa4.18□□□□□ -1.74
USP25-207ENST00000464435 ARL10Q8N8L6 244 aa4.18□□□□□ -1.74
USP25-207ENST00000464435 SLC37A3Q8NCC5 494 aa4.18□□□□□ -1.74
USP25-207ENST00000464435 SLC26A7Q8TE54 656 aa4.18□□□□□ -1.74
USP25-207ENST00000464435 RSPH1Q8WYR4 309 aa4.18□□□□□ -1.74
USP25-207ENST00000464435 AP2M1Q96CW1 435 aa4.18□□□□□ -1.74
USP25-207ENST00000464435 CDHR1Q96JP9 859 aa4.18□□□□□ -1.74
USP25-207ENST00000464435 ZNF71Q9NQZ8 489 aaPredicted RBP4.18□□□□□ -1.74
USP25-207ENST00000464435 GRID1Q9ULK0 1009 aa4.18□□□□□ -1.74
USP25-207ENST00000464435 A0A0B4J203 849 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 PMS2P5A8MQ11 134 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 ACSL4O60488 711 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 SOCS5O75159 536 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 GLRA3O75311 464 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 CDC123O75794 336 aaPredicted RBP4.17□□□□□ -1.74
USP25-207ENST00000464435 CAVIN2O95810 425 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 EDN1P05305 212 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 PTMAP06454 111 aaKnown RBP4.17□□□□□ -1.74
USP25-207ENST00000464435 HMOX1P09601 288 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 SBK2P0C263 348 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 FAM157CP0CG43 387 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 CYP2A7P20853 494 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 KRTAP5-9P26371 169 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 MAP2K2P36507 400 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 MAGEA11P43364 429 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 IER3P46695 156 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 PRAMEF8Q5VWM4 474 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 PM20D1Q6GTS8 502 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 FUT10Q6P4F1 479 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 SIGLEC15Q6ZMC9 328 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 RAPH1Q70E73 1250 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 BTN2A1Q7KYR7 527 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 G2E3Q7L622 706 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 C5orf24Q7Z6I8 188 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 ANKRD46Q86W74 232 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 APLFQ8IW19 511 aaPredicted RBP4.17□□□□□ -1.74
USP25-207ENST00000464435 RCOR2Q8IZ40 523 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 OR7A2PQ8NGA2 310 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 OR1L3Q8NH93 324 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 PDLIM5Q96HC4 596 aaKnown RBP4.17□□□□□ -1.74
USP25-207ENST00000464435 PRAC1Q96KF2 57 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 TSSK2Q96PF2 358 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 BTBD9Q96Q07 612 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 RASL10BQ96S79 203 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 ALKBH7Q9BT30 221 aaPredicted RBP4.17□□□□□ -1.74
USP25-207ENST00000464435 MRPL9Q9BYD2 267 aaKnown RBP4.17□□□□□ -1.74
USP25-207ENST00000464435 KRTAP4-4Q9BYR3 166 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 OSBPL8Q9BZF1 889 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 ACPTQ9BZG2 426 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 MTMR12Q9C0I1 747 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 C5orf66Q9H5L9 145 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 ATP13A3Q9H7F0 1226 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 RNF121Q9H920 327 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 RNPEPL1Q9HAU8 725 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 MRPL17Q9NRX2 175 aaKnown RBP4.17□□□□□ -1.74
USP25-207ENST00000464435 PNPLA3Q9NST1 481 aa4.17□□□□□ -1.74
USP25-207ENST00000464435 C19orf25Q9UFG5 118 aaPredicted RBP4.17□□□□□ -1.74
USP25-207ENST00000464435 ARID2Q68CP9 1835 aa4.16□□□□□ -1.74
USP25-207ENST00000464435 TRAV18A0A075B6X5 111 aa4.16□□□□□ -1.74
USP25-207ENST00000464435 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.16□□□□□ -1.74
USP25-207ENST00000464435 A0A0G2JLW4 131 aa4.16□□□□□ -1.74
USP25-207ENST00000464435 CDK2AP2O75956 126 aa4.16□□□□□ -1.74
USP25-207ENST00000464435 AKAP3O75969 853 aa4.16□□□□□ -1.74
USP25-207ENST00000464435 PATE4P0C8F1 98 aa4.16□□□□□ -1.74
USP25-207ENST00000464435 PRSS56P0CW18 603 aa4.16□□□□□ -1.74
USP25-207ENST00000464435 GOT1P17174 413 aa4.16□□□□□ -1.74
USP25-207ENST00000464435 KHKP50053 298 aa4.16□□□□□ -1.74
USP25-207ENST00000464435 CLDN17P56750 224 aa4.16□□□□□ -1.74
USP25-207ENST00000464435 HERV-K104P61576 105 aa4.16□□□□□ -1.74
USP25-207ENST00000464435 AKAP17AQ02040 695 aaKnown RBP4.16□□□□□ -1.74
USP25-207ENST00000464435 PDLIM3Q53GG5 364 aaPredicted RBP4.16□□□□□ -1.74
USP25-207ENST00000464435 ZNF542PQ5EBM4 170 aa4.16□□□□□ -1.74
USP25-207ENST00000464435 ZNF789Q5FWF6 425 aa4.16□□□□□ -1.74
USP25-207ENST00000464435 FFAR4Q5NUL3 377 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms