RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 ANKRD34CP0C6C1 535 aa13.74□□□□□ -0.21
COL6A1-202ENST00000463060 CDH3P22223 829 aa13.74□□□□□ -0.21
COL6A1-202ENST00000463060 AHRP35869 848 aa13.74□□□□□ -0.21
COL6A1-202ENST00000463060 ARL1P40616 181 aaPredicted RBP13.74□□□□□ -0.21
COL6A1-202ENST00000463060 BCL6P41182 706 aa13.74□□□□□ -0.21
COL6A1-202ENST00000463060 PIK3CBP42338 1070 aa13.74□□□□□ -0.21
COL6A1-202ENST00000463060 CBX1P83916 185 aa13.74□□□□□ -0.21
COL6A1-202ENST00000463060 ILKQ13418 452 aa13.74□□□□□ -0.21
COL6A1-202ENST00000463060 HIST2H2ACQ16777 129 aaPredicted RBP13.74□□□□□ -0.21
COL6A1-202ENST00000463060 HIST2H2AA3Q6FI13 130 aa13.74□□□□□ -0.21
COL6A1-202ENST00000463060 RNF44Q7L0R7 432 aa13.74□□□□□ -0.21
COL6A1-202ENST00000463060 CPLX4Q7Z7G2 160 aa13.74□□□□□ -0.21
COL6A1-202ENST00000463060 MYLK4Q86YV6 388 aaPredicted RBP13.74□□□□□ -0.21
COL6A1-202ENST00000463060 SLITRK4Q8IW52 837 aa13.74□□□□□ -0.21
COL6A1-202ENST00000463060 C19orf47Q8N9M1 422 aaKnown RBP13.74□□□□□ -0.21
COL6A1-202ENST00000463060 MFSD9Q8NBP5 474 aa13.74□□□□□ -0.21
COL6A1-202ENST00000463060 HUS1BQ8NHY5 278 aa13.74□□□□□ -0.21
COL6A1-202ENST00000463060 CREB3L4Q8TEY5 395 aa13.74□□□□□ -0.21
COL6A1-202ENST00000463060 ZNF473Q8WTR7 871 aaKnown RBP13.74□□□□□ -0.21
COL6A1-202ENST00000463060 UBE2E3Q969T4 207 aa13.74□□□□□ -0.21
COL6A1-202ENST00000463060 TCTN2Q96GX1 697 aa13.74□□□□□ -0.21
COL6A1-202ENST00000463060 SEC16BQ96JE7 1060 aa13.74□□□□□ -0.21
COL6A1-202ENST00000463060 SLC41A2Q96JW4 573 aa13.74□□□□□ -0.21
COL6A1-202ENST00000463060 SIKE1Q9BRV8 207 aa13.74□□□□□ -0.21
COL6A1-202ENST00000463060 TRIM55Q9BYV6 548 aa13.74□□□□□ -0.21
COL6A1-202ENST00000463060 NUF2Q9BZD4 464 aa13.74□□□□□ -0.21
COL6A1-202ENST00000463060 KLHL25Q9H0H3 589 aa13.74□□□□□ -0.21
COL6A1-202ENST00000463060 NPHS2Q9NP85 383 aa13.74□□□□□ -0.21
COL6A1-202ENST00000463060 ENAMQ9NRM1 1142 aa13.74□□□□□ -0.21
COL6A1-202ENST00000463060 KLHL14Q9P2G3 628 aa13.74□□□□□ -0.21
COL6A1-202ENST00000463060 BTRCQ9Y297 605 aa13.74□□□□□ -0.21
COL6A1-202ENST00000463060 FIS1Q9Y3D6 152 aa13.74□□□□□ -0.21
COL6A1-202ENST00000463060 PCDHGA4Q9Y5G9 962 aa13.74□□□□□ -0.21
COL6A1-202ENST00000463060 PTGDR2Q9Y5Y4 395 aa13.74□□□□□ -0.21
COL6A1-202ENST00000463060 GVINP1Q7Z2Y8 2422 aa13.73□□□□□ -0.21
COL6A1-202ENST00000463060 MDC1Q14676 2089 aaKnown RBP13.73□□□□□ -0.21
COL6A1-202ENST00000463060 FAM186AA6NE01 2351 aa13.73□□□□□ -0.21
COL6A1-202ENST00000463060 IGHV5-10-1A0A0J9YXX1 117 aa13.73□□□□□ -0.21
COL6A1-202ENST00000463060 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.73□□□□□ -0.21
COL6A1-202ENST00000463060 MAGEB17A8MXT2 336 aa13.73□□□□□ -0.21
COL6A1-202ENST00000463060 OR1F1O43749 312 aa13.73□□□□□ -0.21
COL6A1-202ENST00000463060 CRCPO75575 148 aa13.73□□□□□ -0.21
COL6A1-202ENST00000463060 DKK1O94907 266 aa13.73□□□□□ -0.21
COL6A1-202ENST00000463060 ZBTB11O95625 1053 aaPredicted RBP13.73□□□□□ -0.21
COL6A1-202ENST00000463060 LINC00032P0C843 101 aa13.73□□□□□ -0.21
COL6A1-202ENST00000463060 MSL3P1P0C860 447 aa13.73□□□□□ -0.21
COL6A1-202ENST00000463060 TROVE2P10155 538 aaKnown RBP eCLIP13.73□□□□□ -0.21
COL6A1-202ENST00000463060 HSD3B1P14060 373 aa13.73□□□□□ -0.21
COL6A1-202ENST00000463060 HSD3B2P26439 372 aa13.73□□□□□ -0.21
COL6A1-202ENST00000463060 GSTM2P28161 218 aa13.73□□□□□ -0.21
COL6A1-202ENST00000463060 IDH3AP50213 366 aa13.73□□□□□ -0.21
COL6A1-202ENST00000463060 AQP5P55064 265 aa13.73□□□□□ -0.21
COL6A1-202ENST00000463060 RPS15AP62244 130 aaKnown RBP13.73□□□□□ -0.21
COL6A1-202ENST00000463060 ZFP36L1Q07352 338 aaKnown RBP13.73□□□□□ -0.21
COL6A1-202ENST00000463060 IFT88Q13099 833 aa13.73□□□□□ -0.21
COL6A1-202ENST00000463060 TUBB3Q13509 450 aa13.73□□□□□ -0.21
COL6A1-202ENST00000463060 RBBP5Q15291 538 aaKnown RBP13.73□□□□□ -0.21
COL6A1-202ENST00000463060 SLC9B1Q4ZJI4 515 aa13.73□□□□□ -0.21
COL6A1-202ENST00000463060 VWA5B1Q5TIE3 1220 aa13.73□□□□□ -0.21
COL6A1-202ENST00000463060 CACHD1Q5VU97 1274 aa13.73□□□□□ -0.21
COL6A1-202ENST00000463060 SCIMPQ6UWF3 145 aa13.73□□□□□ -0.21
COL6A1-202ENST00000463060 LARP4Q71RC2 724 aaKnown RBP eCLIP13.73□□□□□ -0.21
COL6A1-202ENST00000463060 VN1R4Q7Z5H5 301 aa13.73□□□□□ -0.21
COL6A1-202ENST00000463060 KMT5CQ86Y97 462 aa13.73□□□□□ -0.21
COL6A1-202ENST00000463060 RNF175Q8N4F7 328 aa13.73□□□□□ -0.21
COL6A1-202ENST00000463060 AFAP1L2Q8N4X5 818 aa13.73□□□□□ -0.21
COL6A1-202ENST00000463060 OR2T11Q8NH01 316 aa13.73□□□□□ -0.21
COL6A1-202ENST00000463060 WDR48Q8TAF3 677 aa13.73□□□□□ -0.21
COL6A1-202ENST00000463060 C10orf82Q8WW14 230 aa13.73□□□□□ -0.21
COL6A1-202ENST00000463060 SELENOMQ8WWX9 145 aa13.73□□□□□ -0.21
COL6A1-202ENST00000463060 REPS1Q96D71 796 aa13.73□□□□□ -0.21
COL6A1-202ENST00000463060 MTFMTQ96DP5 389 aaKnown RBP13.73□□□□□ -0.21
COL6A1-202ENST00000463060 THAP11Q96EK4 314 aa13.73□□□□□ -0.21
COL6A1-202ENST00000463060 C19orf60Q96EN9 201 aa13.73□□□□□ -0.21
COL6A1-202ENST00000463060 THOC1Q96FV9 657 aaKnown RBP13.73□□□□□ -0.21
COL6A1-202ENST00000463060 ZNF285Q96NJ3 590 aa13.73□□□□□ -0.21
COL6A1-202ENST00000463060 FCRL4Q96PJ5 515 aa13.73□□□□□ -0.21
COL6A1-202ENST00000463060 ELAC2Q9BQ52 826 aaKnown RBP13.73□□□□□ -0.21
COL6A1-202ENST00000463060 ZNF768Q9H5H4 540 aaKnown RBP13.73□□□□□ -0.21
COL6A1-202ENST00000463060 ELOVL6Q9H5J4 265 aa13.73□□□□□ -0.21
COL6A1-202ENST00000463060 BRF2Q9HAW0 419 aa13.73□□□□□ -0.21
COL6A1-202ENST00000463060 ADGRE2Q9UHX3 823 aa13.73□□□□□ -0.21
COL6A1-202ENST00000463060 ZFP69BQ9UJL9 534 aa13.73□□□□□ -0.21
COL6A1-202ENST00000463060 PCDHGA1Q9Y5H4 931 aa13.73□□□□□ -0.21
COL6A1-202ENST00000463060 TRPC5OSA6NMA1 111 aa13.72□□□□□ -0.21
COL6A1-202ENST00000463060 SKAP2O75563 359 aaPredicted RBP13.72□□□□□ -0.21
COL6A1-202ENST00000463060 CLEC3AO75596 197 aa13.72□□□□□ -0.21
COL6A1-202ENST00000463060 ETHE1O95571 254 aa13.72□□□□□ -0.21
COL6A1-202ENST00000463060 CHEK2O96017 543 aa13.72□□□□□ -0.21
COL6A1-202ENST00000463060 PRR35P0CG20 571 aa13.72□□□□□ -0.21
COL6A1-202ENST00000463060 THRAP10827 490 aa13.72□□□□□ -0.21
COL6A1-202ENST00000463060 NELFEP18615 380 aaKnown RBP13.72□□□□□ -0.21
COL6A1-202ENST00000463060 CSRP1P21291 193 aaKnown RBP13.72□□□□□ -0.21
COL6A1-202ENST00000463060 PRPH2P23942 346 aa13.72□□□□□ -0.21
COL6A1-202ENST00000463060 SERPINB1P30740 379 aa13.72□□□□□ -0.21
COL6A1-202ENST00000463060 GRK3P35626 688 aa13.72□□□□□ -0.21
COL6A1-202ENST00000463060 HYAL2Q12891 473 aa13.72□□□□□ -0.21
COL6A1-202ENST00000463060 CSTF3Q12996 717 aaKnown RBP13.72□□□□□ -0.21
COL6A1-202ENST00000463060 PDCD2Q16342 344 aaPredicted RBP13.72□□□□□ -0.21
COL6A1-202ENST00000463060 SGO1Q5FBB7 561 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms