RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 PRR7Q8TB68 274 aa17.52■□□□□ 0.4
COL9A2-205ENST00000461118 ANKRD49Q8WVL7 239 aa17.52■□□□□ 0.4
COL9A2-205ENST00000461118 PNPLA2Q96AD5 504 aa17.52■□□□□ 0.4
COL9A2-205ENST00000461118 NACC2Q96BF6 587 aa17.52■□□□□ 0.4
COL9A2-205ENST00000461118 PTERQ96BW5 349 aa17.52■□□□□ 0.4
COL9A2-205ENST00000461118 TSPAN17Q96FV3 270 aa17.52■□□□□ 0.4
COL9A2-205ENST00000461118 SMAD5Q99717 465 aaKnown RBP17.52■□□□□ 0.4
COL9A2-205ENST00000461118 HAUS8Q9BT25 410 aa17.52■□□□□ 0.4
COL9A2-205ENST00000461118 WDR54Q9H977 334 aa17.52■□□□□ 0.4
COL9A2-205ENST00000461118 DMGDHQ9UI17 866 aaKnown RBP17.52■□□□□ 0.4
COL9A2-205ENST00000461118 PTRH2Q9Y3E5 179 aaKnown RBP17.52■□□□□ 0.4
COL9A2-205ENST00000461118 CROCCQ5TZA2 2017 aa17.52■□□□□ 0.39
COL9A2-205ENST00000461118 CDC7O00311 574 aa17.51■□□□□ 0.39
COL9A2-205ENST00000461118 MED26O95402 600 aa17.51■□□□□ 0.39
COL9A2-205ENST00000461118 CBX6O95503 412 aa17.51■□□□□ 0.39
COL9A2-205ENST00000461118 STX2P32856 288 aa17.51■□□□□ 0.39
COL9A2-205ENST00000461118 SPRP35270 261 aaPredicted RBP17.51■□□□□ 0.39
COL9A2-205ENST00000461118 FOLR3P41439 243 aa17.51■□□□□ 0.39
COL9A2-205ENST00000461118 CSNK1G2P78368 415 aa17.51■□□□□ 0.39
COL9A2-205ENST00000461118 CDKL1Q00532 357 aa17.51■□□□□ 0.39
COL9A2-205ENST00000461118 NAB1Q13506 487 aa17.51■□□□□ 0.39
COL9A2-205ENST00000461118 MED25Q71SY5 747 aa17.51■□□□□ 0.39
COL9A2-205ENST00000461118 COX15Q7KZN9 410 aa17.51■□□□□ 0.39
COL9A2-205ENST00000461118 ADCK2Q7Z695 626 aa17.51■□□□□ 0.39
COL9A2-205ENST00000461118 RELL1Q8IUW5 271 aa17.51■□□□□ 0.39
COL9A2-205ENST00000461118 ARHGEF39Q8N4T4 335 aa17.51■□□□□ 0.39
COL9A2-205ENST00000461118 CSNK1A1LQ8N752 337 aa17.51■□□□□ 0.39
COL9A2-205ENST00000461118 TMEM102Q8N9M5 508 aaPredicted RBP17.51■□□□□ 0.39
COL9A2-205ENST00000461118 FBF1Q8TES7 1133 aa17.51■□□□□ 0.39
COL9A2-205ENST00000461118 RERGQ96A58 199 aaPredicted RBP17.51■□□□□ 0.39
COL9A2-205ENST00000461118 DOCK10Q96BY6 2186 aa17.51■□□□□ 0.39
COL9A2-205ENST00000461118 TRIM44Q96DX7 344 aaPredicted RBP17.51■□□□□ 0.39
COL9A2-205ENST00000461118 THAP11Q96EK4 314 aa17.51■□□□□ 0.39
COL9A2-205ENST00000461118 MVB12AQ96EY5 273 aa17.51■□□□□ 0.39
COL9A2-205ENST00000461118 C10orf90Q96M02 699 aa17.51■□□□□ 0.39
COL9A2-205ENST00000461118 TSPYL1Q9H0U9 437 aa17.51■□□□□ 0.39
COL9A2-205ENST00000461118 ZNF304Q9HCX3 659 aa17.51■□□□□ 0.39
COL9A2-205ENST00000461118 ENO4A6NNW6 628 aa17.5■□□□□ 0.39
COL9A2-205ENST00000461118 GUCA1CO95843 209 aa17.5■□□□□ 0.39
COL9A2-205ENST00000461118 UMODP07911 640 aa17.5■□□□□ 0.39
COL9A2-205ENST00000461118 STMN1P16949 149 aa17.5■□□□□ 0.39
COL9A2-205ENST00000461118 RPS15AP62244 130 aaKnown RBP17.5■□□□□ 0.39
COL9A2-205ENST00000461118 USP10Q14694 798 aaKnown RBP17.5■□□□□ 0.39
COL9A2-205ENST00000461118 ZKSCAN8Q15776 578 aaPredicted RBP17.5■□□□□ 0.39
COL9A2-205ENST00000461118 NKG7Q16617 165 aa17.5■□□□□ 0.39
COL9A2-205ENST00000461118 HKDC1Q2TB90 917 aa17.5■□□□□ 0.39
COL9A2-205ENST00000461118 PLEKHN1Q494U1 663 aaPredicted RBP17.5■□□□□ 0.39
COL9A2-205ENST00000461118 CEP128Q6ZU80 1094 aa17.5■□□□□ 0.39
COL9A2-205ENST00000461118 ADAMTSL2Q86TH1 951 aa17.5■□□□□ 0.39
COL9A2-205ENST00000461118 HPS6Q86YV9 775 aa17.5■□□□□ 0.39
COL9A2-205ENST00000461118 TICAM1Q8IUC6 712 aa17.5■□□□□ 0.39
COL9A2-205ENST00000461118 CTAGE3PQ8IX95 158 aa17.5■□□□□ 0.39
COL9A2-205ENST00000461118 ABHD11Q8NFV4 315 aa17.5■□□□□ 0.39
COL9A2-205ENST00000461118 OR4K1Q8NGD4 311 aa17.5■□□□□ 0.39
COL9A2-205ENST00000461118 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.5■□□□□ 0.39
COL9A2-205ENST00000461118 SNRNP40Q96DI7 357 aaKnown RBP17.5■□□□□ 0.39
COL9A2-205ENST00000461118 DERL2Q9GZP9 239 aa17.5■□□□□ 0.39
COL9A2-205ENST00000461118 CAB39LQ9H9S4 337 aa17.5■□□□□ 0.39
COL9A2-205ENST00000461118 SLAMF7Q9NQ25 335 aa17.5■□□□□ 0.39
COL9A2-205ENST00000461118 CTNNAL1Q9UBT7 734 aa17.5■□□□□ 0.39
COL9A2-205ENST00000461118 NXT1Q9UKK6 140 aaKnown RBP17.5■□□□□ 0.39
COL9A2-205ENST00000461118 CDC14AQ9UNH5 594 aa17.5■□□□□ 0.39
COL9A2-205ENST00000461118 SH2B3Q9UQQ2 575 aa17.5■□□□□ 0.39
COL9A2-205ENST00000461118 RUVBL1Q9Y265 456 aaKnown RBP17.5■□□□□ 0.39
COL9A2-205ENST00000461118 OARD1Q9Y530 152 aa17.5■□□□□ 0.39
COL9A2-205ENST00000461118 POLEQ07864 2286 aa17.5■□□□□ 0.39
COL9A2-205ENST00000461118 A6NL46 340 aa17.49■□□□□ 0.39
COL9A2-205ENST00000461118 VSTM2BA6NLU5 285 aa17.49■□□□□ 0.39
COL9A2-205ENST00000461118 OR1D4P47884 311 aa17.49■□□□□ 0.39
COL9A2-205ENST00000461118 HNMTP50135 292 aa17.49■□□□□ 0.39
COL9A2-205ENST00000461118 FAM53BQ14153 422 aa17.49■□□□□ 0.39
COL9A2-205ENST00000461118 CRB2Q5IJ48 1285 aa17.49■□□□□ 0.39
COL9A2-205ENST00000461118 MRGPREQ86SM8 312 aa17.49■□□□□ 0.39
COL9A2-205ENST00000461118 PLD3Q8IV08 490 aa17.49■□□□□ 0.39
COL9A2-205ENST00000461118 PPM1NQ8N819 430 aa17.49■□□□□ 0.39
COL9A2-205ENST00000461118 PYCR2Q96C36 320 aa17.49■□□□□ 0.39
COL9A2-205ENST00000461118 CABS1Q96KC9 395 aa17.49■□□□□ 0.39
COL9A2-205ENST00000461118 UBXN10Q96LJ8 280 aa17.49■□□□□ 0.39
COL9A2-205ENST00000461118 OR4K3Q96R72 315 aa17.49■□□□□ 0.39
COL9A2-205ENST00000461118 SPSB2Q99619 263 aa17.49■□□□□ 0.39
COL9A2-205ENST00000461118 SARGQ9BW04 601 aa17.49■□□□□ 0.39
COL9A2-205ENST00000461118 MTRF1LQ9UGC7 380 aaKnown RBP17.49■□□□□ 0.39
COL9A2-205ENST00000461118 IGLV3-12A0A075B6K2 115 aa17.48■□□□□ 0.39
COL9A2-205ENST00000461118 NPEPPSL1A6NEC2 478 aa17.48■□□□□ 0.39
COL9A2-205ENST00000461118 IGHEP01854 428 aa17.48■□□□□ 0.39
COL9A2-205ENST00000461118 ANXA5P08758 320 aa17.48■□□□□ 0.39
COL9A2-205ENST00000461118 CCDC166P0CW27 439 aa17.48■□□□□ 0.39
COL9A2-205ENST00000461118 CDH1P12830 882 aa17.48■□□□□ 0.39
COL9A2-205ENST00000461118 OTX2P32243 289 aa17.48■□□□□ 0.39
COL9A2-205ENST00000461118 RRADP55042 308 aa17.48■□□□□ 0.39
COL9A2-205ENST00000461118 ATP1A4Q13733 1029 aa17.48■□□□□ 0.39
COL9A2-205ENST00000461118 NR6A1Q15406 480 aa17.48■□□□□ 0.39
COL9A2-205ENST00000461118 TSNQ15631 228 aaKnown RBP17.48■□□□□ 0.39
COL9A2-205ENST00000461118 VN1R4Q7Z5H5 301 aa17.48■□□□□ 0.39
COL9A2-205ENST00000461118 DTWD1Q8N5C7 304 aa17.48■□□□□ 0.39
COL9A2-205ENST00000461118 ALKBH8Q96BT7 664 aaKnown RBP17.48■□□□□ 0.39
COL9A2-205ENST00000461118 TM4SF19Q96DZ7 209 aa17.48■□□□□ 0.39
COL9A2-205ENST00000461118 BARD1Q99728 777 aaKnown RBP17.48■□□□□ 0.39
COL9A2-205ENST00000461118 SLC29A3Q9BZD2 475 aa17.48■□□□□ 0.39
COL9A2-205ENST00000461118 ASF1BQ9NVP2 202 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms