RNA–Protein interactions for RNA: ENST00000461043.6

ERGIC3-211, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-211ENST00000461043 HYKKA2RU49 373 aa11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 SMIM23A6NLE4 172 aa11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 STX16-NPEPL1H3BU86 382 aa11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 GOLGA8RI6L899 631 aa11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 K7ENP7 123 aa11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 STX16O14662 325 aa11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 DSCR3O14972 297 aa11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 WFS1O76024 890 aa11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 RAB40ALP0C0E4 278 aa11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 C1GALT1C1LP0DN25 315 aa11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 GFAPP14136 432 aa11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 CD22P20273 847 aa11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 VARSP26640 1264 aaKnown RBP11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 GRK3P35626 688 aa11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 AHRP35869 848 aa11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 DLSTP36957 453 aa11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 TMPRSS3P57727 454 aa11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 SNRPNP63162 240 aaKnown RBP11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 NFKB2Q00653 900 aa11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 SLC18A2Q05940 514 aa11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 DNASE1L3Q13609 305 aa11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 TBCCQ15814 346 aa11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 FAM214AQ32MH5 1076 aa11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 C1orf189Q5VU69 101 aa11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 GARNL3Q5VVW2 1013 aa11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 BROXQ5VW32 411 aa11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 INO80CQ6PI98 192 aaPredicted RBP11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 TTLL10Q6ZVT0 673 aa11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 ANKRD53Q8N9V6 530 aa11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 TTC29Q8NA56 475 aaPredicted RBP11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 HNRNPLLQ8WVV9 542 aaKnown RBP11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 MR1Q95460 341 aa11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 RERGQ96A58 199 aaPredicted RBP11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 CRELD1Q96HD1 420 aa11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 SLC45A3Q96JT2 553 aa11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 RUFY1Q96T51 708 aa11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 SPENQ96T58 3664 aaKnown RBP11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 C1QTNF3Q9BXJ4 246 aa11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 GPR87Q9BY21 358 aa11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 PITHD1Q9GZP4 211 aaPredicted RBP11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 PRORYQ9H606 182 aa11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 GPN2Q9H9Y4 310 aaPredicted RBP11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 CPNE5Q9HCH3 593 aa11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 IRAK4Q9NWZ3 460 aa11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 CPSF2Q9P2I0 782 aaKnown RBP11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 EMCNQ9ULC0 261 aa11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 PLAAQ9Y263 795 aa11.56□□□□□ -0.56
ERGIC3-211ENST00000461043 CACNA1BQ00975 2339 aa11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 CCDC151A5D8V7 595 aa11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 LRRC14BA6NHZ5 514 aa11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 E2F3O00716 465 aa11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 TXNDC9O14530 226 aa11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 CTIFO43310 598 aaKnown RBP11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 CCNT2O60583 730 aaKnown RBP11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 SIX3O95343 332 aaPredicted RBP11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 EIF2S1P05198 315 aaKnown RBP11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 KLK3P07288 261 aaPredicted RBP11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 KRT15P19012 456 aa11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 TCN2P20062 427 aa11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 DCDP81605 110 aaKnown RBP11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 ZNF844Q08AG5 666 aa11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 COL9A2Q14055 689 aaPredicted RBP11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 NCF4Q15080 339 aa11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 COL28A1Q2UY09 1125 aa11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 NKAIN1Q4KMZ8 207 aa11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 CRTC2Q53ET0 693 aaPredicted RBP11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 TMEM214Q6NUQ4 689 aaKnown RBP11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 MRPL14Q6P1L8 145 aaKnown RBP11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 C16orf46Q6P387 395 aa11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 CCDC81Q6ZN84 652 aa11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 COX15Q7KZN9 410 aa11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 ASPGQ86U10 573 aa11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 TRABD2AQ86V40 505 aa11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 DTWD1Q8N5C7 304 aa11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 PTGR2Q8N8N7 351 aaPredicted RBP11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 CREB3L4Q8TEY5 395 aa11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 KIAA1143Q96AT1 154 aaPredicted RBP11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 MVB12AQ96EY5 273 aa11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 SCYL1Q96KG9 808 aa11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 AIF1LQ9BQI0 150 aa11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 EFHD1Q9BUP0 239 aa11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 NLNQ9BYT8 704 aa11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 NT5DC2Q9H857 520 aa11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 TXLNGQ9NUQ3 528 aa11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 MKS1Q9NXB0 559 aa11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 OPTCQ9UBM4 332 aa11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 DCDC2Q9UHG0 476 aa11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 ZFP69BQ9UJL9 534 aa11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 KCND3Q9UK17 655 aa11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 TNPO3Q9Y5L0 923 aaKnown RBP11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 SEC16AO15027 2179 aa11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 CFAP46Q8IYW2 2715 aa11.55□□□□□ -0.56
ERGIC3-211ENST00000461043 A8MT66 165 aa11.54□□□□□ -0.56
ERGIC3-211ENST00000461043 FOXS1O43638 330 aa11.54□□□□□ -0.56
ERGIC3-211ENST00000461043 OR1F1O43749 312 aa11.54□□□□□ -0.56
ERGIC3-211ENST00000461043 CNOT3O75175 753 aaKnown RBP11.54□□□□□ -0.56
ERGIC3-211ENST00000461043 SMIM24O75264 130 aa11.54□□□□□ -0.56
ERGIC3-211ENST00000461043 GLRA3O75311 464 aa11.54□□□□□ -0.56
ERGIC3-211ENST00000461043 TBX6O95947 436 aaPredicted RBP11.54□□□□□ -0.56
ERGIC3-211ENST00000461043 RECKO95980 971 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms