RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 PDE1CQ14123 709 aaPredicted RBP4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 KPNB1Q14974 876 aaKnown RBP4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 P3H1Q32P28 736 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 POM121L1PQ3SYA9 428 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 MPPE1Q53F39 396 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 BRMS1LQ5PSV4 323 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 ERMARDQ5T6L9 678 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 DENND2CQ68D51 928 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 FCRLBQ6BAA4 426 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 TTC23LQ6PF05 361 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 MFSD7Q6UXD7 560 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 ZNF852Q6ZMS4 543 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 ARCQ7LC44 396 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 ADIPOR2Q86V24 386 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 TRABD2AQ86V40 505 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 RALGPS2Q86X27 583 aaPredicted RBP4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 MAML2Q8IZL2 1156 aaPredicted RBP4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 KIRREL3Q8IZU9 778 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 TMEM132CQ8N3T6 1108 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 CPXM2Q8N436 756 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 FAM109AQ8N4B1 249 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 PQLC3Q8N755 202 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 LRRC57Q8N9N7 239 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 HJURPQ8NCD3 748 aaPredicted RBP4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 OR6K2Q8NGY2 324 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 RPLP0P6Q8NHW5 317 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 GSDMBQ8TAX9 411 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 BRSK1Q8TDC3 778 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 ZNF75CPQ92670 426 aaPredicted RBP4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 DNASE1L2Q92874 299 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 NTAN1Q96AB6 310 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 ALG14Q96F25 216 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 PGAP3Q96FM1 320 aaPredicted RBP4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 HMCESQ96FZ2 354 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 CEP19Q96LK0 163 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 NSMCE3Q96MG7 304 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 GBP5Q96PP8 586 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 PSKH2Q96QS6 385 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 CCT8L2Q96SF2 557 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 AIFM2Q9BRQ8 373 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 HAUS8Q9BT25 410 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 HEMGNQ9BXL5 484 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 CALN1Q9BXU9 219 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 NUF2Q9BZD4 464 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 GPR63Q9BZJ6 419 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 CIPCQ9C0C6 399 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 AMBRA1Q9C0C7 1298 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 SLC39A8Q9C0K1 460 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 GBA3Q9H227 469 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 TPK1Q9H3S4 243 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 MRPL47Q9HD33 250 aaKnown RBP4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 INIPQ9NRY2 104 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 SMARCAL1Q9NZC9 954 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 DLGAP2Q9P1A6 1054 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 DEC1Q9P2X7 70 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 KCNE5Q9UJ90 142 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 SLC12A4Q9UP95 1085 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 SLC27A6Q9Y2P4 619 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 PPP2R2CQ9Y2T4 447 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 OR51B4Q9Y5P0 310 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 IGF2RP11717 2491 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 ANKRD17O75179 2603 aaKnown RBP4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 TENM4Q6N022 2769 aa4.71□□□□□ -1.65
ATPAF1-203ENST00000460928 EML5Q05BV3 1969 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 CHD5Q8TDI0 1954 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 MUC22E2RYF6 1773 aaPredicted RBP4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 HECTD1Q9ULT8 2610 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 IGLV3-10A0A075B6K4 115 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 C3orf70A6NLC5 250 aaPredicted RBP4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 C2orf81A6NN90 581 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 GOLGA8MH3BSY2 632 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 J3KR12 359 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 EEF2KO00418 725 aaKnown RBP4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 NVLO15381 856 aaKnown RBP4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 SULT1B1O43704 296 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 SPOPO43791 374 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 MFSD11O43934 449 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 ZMPSTE24O75844 475 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 APODP05090 189 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 RHOCP08134 193 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 GSTT2P0CG29 244 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 GSTT2BP0CG30 244 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 SLC2A3P11169 496 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 ERCC2P18074 760 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 AOC1P19801 751 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 GATA3P23771 443 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 KDELR1P24390 212 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 EPHB2P29323 1055 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 HTR7P34969 479 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 SERPINB6P35237 376 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 SKIV2L2P42285 1042 aaKnown RBP4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 TIRAPP58753 221 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 TPI1P60174 286 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 DSTNP60981 165 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 VSNL1P62760 191 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 SEMG2Q02383 582 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 GBE1Q04446 702 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 NIPAL4Q0D2K0 466 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms