RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 MACC1Q6ZN28 852 aa14.91□□□□□ -0.02
LMNB1-203ENST00000460265 PAGE2Q7Z2X7 111 aa14.91□□□□□ -0.02
LMNB1-203ENST00000460265 NECAB2Q7Z6G3 386 aa14.91□□□□□ -0.02
LMNB1-203ENST00000460265 OR2A12Q8NGT7 310 aa14.91□□□□□ -0.02
LMNB1-203ENST00000460265 TXNDC15Q96J42 360 aa14.91□□□□□ -0.02
LMNB1-203ENST00000460265 ZSWIM3Q96MP5 696 aa14.91□□□□□ -0.02
LMNB1-203ENST00000460265 DPH2Q9BQC3 489 aaPredicted RBP14.91□□□□□ -0.02
LMNB1-203ENST00000460265 REXO4Q9GZR2 422 aaKnown RBP14.91□□□□□ -0.02
LMNB1-203ENST00000460265 ITM2CQ9NQX7 267 aa14.91□□□□□ -0.02
LMNB1-203ENST00000460265 DNMT3BQ9UBC3 853 aaKnown RBP14.91□□□□□ -0.02
LMNB1-203ENST00000460265 ERVW-1Q9UQF0 538 aa14.91□□□□□ -0.02
LMNB1-203ENST00000460265 ATG13O75143 517 aa14.91□□□□□ -0.02
LMNB1-203ENST00000460265 C1SP09871 688 aa14.91□□□□□ -0.02
LMNB1-203ENST00000460265 RAP2AP10114 183 aa14.91□□□□□ -0.02
LMNB1-203ENST00000460265 TMEM115Q12893 351 aaPredicted RBP14.91□□□□□ -0.02
LMNB1-203ENST00000460265 AGTRAPQ6RW13 159 aa14.91□□□□□ -0.02
LMNB1-203ENST00000460265 SPRED2Q7Z698 418 aa14.91□□□□□ -0.02
LMNB1-203ENST00000460265 TRIM43Q96BQ3 446 aaPredicted RBP14.91□□□□□ -0.02
LMNB1-203ENST00000460265 PAK6Q9NQU5 681 aaPredicted RBP14.91□□□□□ -0.02
LMNB1-203ENST00000460265 GPRC5BQ9NZH0 403 aa14.91□□□□□ -0.02
LMNB1-203ENST00000460265 TBX21Q9UL17 535 aa14.91□□□□□ -0.02
LMNB1-203ENST00000460265 TESMINQ9Y4I5 508 aa14.91□□□□□ -0.02
LMNB1-203ENST00000460265 DLGAP1O14490 977 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 TBX1O43435 398 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 TPPPO94811 219 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 C8GP07360 202 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 BMP4P12644 408 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 PDHA2P29803 388 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 FOXM1Q08050 763 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 CCSMST1Q4G0I0 132 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 INTS11Q5TA45 600 aaKnown RBP14.9□□□□□ -0.02
LMNB1-203ENST00000460265 C1orf52Q8N6N3 182 aaKnown RBP14.9□□□□□ -0.02
LMNB1-203ENST00000460265 OMA1Q96E52 524 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 IKZF5Q9H5V7 419 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 LTB4R2Q9NPC1 389 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 AKIP1Q9NQ31 210 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 AGPAT4Q9NRZ5 378 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 ARMC1Q9NVT9 282 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 STMN3Q9NZ72 180 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 ZNF221Q9UK13 617 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 SARDHQ9UL12 918 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 PLAGL1Q9UM63 463 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 BOLA1Q9Y3E2 137 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 DYRK1BQ9Y463 629 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 THRBP10828 461 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 UMPSP11172 480 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 IL7RP16871 459 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 IRS1P35568 1242 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 SLC7A9P82251 487 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 CREMQ03060 361 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 DGCR6Q14129 220 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 Q6ZNB5 142 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 THOC6Q86W42 341 aaKnown RBP14.9□□□□□ -0.02
LMNB1-203ENST00000460265 BADQ92934 168 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 CNDP2Q96KP4 475 aaKnown RBP14.9□□□□□ -0.02
LMNB1-203ENST00000460265 OR2B2Q9GZK3 357 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 THG1LQ9NWX6 298 aaKnown RBP14.9□□□□□ -0.02
LMNB1-203ENST00000460265 IL36AQ9UHA7 158 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 UTS2RQ9UKP6 389 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 TRIM64BA6NI03 449 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 PDZK1P1A8MUH7 402 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 LATS1O95835 1130 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 SLC16A8O95907 504 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 TIMP1P01033 207 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 CAMK2GQ13555 558 aaPredicted RBP14.9□□□□□ -0.02
LMNB1-203ENST00000460265 TMEM236Q5W0B7 351 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 EPHX4Q8IUS5 362 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 ADHFE1Q8IWW8 467 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 GTF2H4Q92759 462 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 TMEM246Q9BRR3 403 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 SLC7A5P2Q9GIP4 190 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 CPNE5Q9HCH3 593 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 DEC1Q9P2X7 70 aa14.9□□□□□ -0.02
LMNB1-203ENST00000460265 PTPRDP23468 1912 aa14.89□□□□□ -0.03
LMNB1-203ENST00000460265 CENPXA8MT69 81 aa14.89□□□□□ -0.03
LMNB1-203ENST00000460265 H0Y858 1186 aa14.89□□□□□ -0.03
LMNB1-203ENST00000460265 GAPDHSO14556 408 aaPredicted RBP14.89□□□□□ -0.03
LMNB1-203ENST00000460265 CREG1O75629 220 aa14.89□□□□□ -0.03
LMNB1-203ENST00000460265 ANKRD34AQ69YU3 496 aa14.89□□□□□ -0.03
LMNB1-203ENST00000460265 CES5AQ6NT32 575 aa14.89□□□□□ -0.03
LMNB1-203ENST00000460265 NOXRED1Q6NXP6 359 aa14.89□□□□□ -0.03
LMNB1-203ENST00000460265 TBPL2Q6SJ96 375 aa14.89□□□□□ -0.03
LMNB1-203ENST00000460265 CLECL1Q8IZS7 167 aa14.89□□□□□ -0.03
LMNB1-203ENST00000460265 C8orf59Q8N0T1 100 aaPredicted RBP14.89□□□□□ -0.03
LMNB1-203ENST00000460265 OR4K1Q8NGD4 311 aa14.89□□□□□ -0.03
LMNB1-203ENST00000460265 TSPEARQ8WU66 669 aa14.89□□□□□ -0.03
LMNB1-203ENST00000460265 PDLIM5Q96HC4 596 aaKnown RBP14.89□□□□□ -0.03
LMNB1-203ENST00000460265 TOX2Q96NM4 488 aa14.89□□□□□ -0.03
LMNB1-203ENST00000460265 BRINP2Q9C0B6 783 aa14.89□□□□□ -0.03
LMNB1-203ENST00000460265 RASSF1Q9NS23 344 aa14.89□□□□□ -0.03
LMNB1-203ENST00000460265 VPS29Q9UBQ0 182 aa14.89□□□□□ -0.03
LMNB1-203ENST00000460265 CLIC1O00299 241 aa14.89□□□□□ -0.03
LMNB1-203ENST00000460265 KPNA5O15131 536 aa14.89□□□□□ -0.03
LMNB1-203ENST00000460265 ABCB7O75027 752 aa14.89□□□□□ -0.03
LMNB1-203ENST00000460265 EPHX1P07099 455 aa14.89□□□□□ -0.03
LMNB1-203ENST00000460265 ENGP17813 658 aa14.89□□□□□ -0.03
LMNB1-203ENST00000460265 RPS3P23396 243 aaKnown RBP eCLIP14.89□□□□□ -0.031e-6■■■□□ 16.7
LMNB1-203ENST00000460265 HTR1EP28566 365 aa14.89□□□□□ -0.03
LMNB1-203ENST00000460265 VIPR1P32241 457 aa14.89□□□□□ -0.03
LMNB1-203ENST00000460265 P2RX3P56373 397 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms