RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 GBAP04062 536 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 TFAP2AP05549 437 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 ZFYP08048 801 aaPredicted RBP3.16□□□□□ -1.9
VPS8-215ENST00000460158 UBTFL6P0CB48 400 aaPredicted RBP3.16□□□□□ -1.9
VPS8-215ENST00000460158 ZNF853P0CG23 659 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 VPREB1P12018 145 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 CCDC130P13994 396 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 HNRNPA2B1P22626 353 aaKnown RBP3.16□□□□□ -1.9
VPS8-215ENST00000460158 CCR1P32246 355 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 NUP62P37198 522 aaPredicted RBP3.16□□□□□ -1.9
VPS8-215ENST00000460158 FMO5P49326 533 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 ARSEP51690 589 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 AP3M2P53677 418 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 SIRPAP78324 504 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 RPL24P83731 157 aaKnown RBP3.16□□□□□ -1.9
VPS8-215ENST00000460158 PMP22Q01453 160 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 ARL16Q0P5N6 197 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 TROAPQ12815 778 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 GAGE2BQ13066 116 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 CLPPQ16740 277 aaPredicted RBP3.16□□□□□ -1.9
VPS8-215ENST00000460158 UGP2Q16851 508 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 LRIT3Q3SXY7 679 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 ZNF718Q3SXZ3 478 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 ZNF672Q499Z4 452 aaPredicted RBP3.16□□□□□ -1.9
VPS8-215ENST00000460158 GAGE2EQ4V326 116 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 FAM76BQ5HYJ3 339 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 SIRPB2Q5JXA9 342 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 SPATA46Q5T0L3 261 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 PLA2G4FQ68DD2 849 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 ARHGAP17Q68EM7 881 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 KRT39Q6A163 491 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 RAET1GQ6H3X3 334 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 DHRS7BQ6IAN0 325 aaPredicted RBP3.16□□□□□ -1.9
VPS8-215ENST00000460158 GAGE2AQ6NT46 116 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 NEK5Q6P3R8 708 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 TEX38Q6PEX7 206 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 CLEC2AQ6UVW9 174 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 MOXD1Q6UVY6 613 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 ZNF852Q6ZMS4 543 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 C18orf65Q6ZTR6 163 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 PIWIL4Q7Z3Z4 852 aaKnown RBP3.16□□□□□ -1.9
VPS8-215ENST00000460158 CAMKMTQ7Z624 323 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 LUZP1Q86V48 1076 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 MFN1Q8IWA4 741 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 CFAP206Q8IYR0 622 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 FAM9CQ8IZT9 166 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 GUF1Q8N442 669 aaKnown RBP3.16□□□□□ -1.9
VPS8-215ENST00000460158 FBXO39Q8N4B4 442 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 RFLNBQ8N5W9 214 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 TRIML2Q8N7C3 387 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 LINC00469Q8N7U9 141 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 ZNF321PQ8N8H1 164 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 EIF1ADQ8N9N8 165 aaKnown RBP3.16□□□□□ -1.9
VPS8-215ENST00000460158 CCNYQ8ND76 341 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 OR13A1Q8NGR1 328 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 WDR20Q8TBZ3 569 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 TAS1R2Q8TE23 839 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 SEMA4DQ92854 862 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 NCLNQ969V3 563 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 ERLEC1Q96DZ1 483 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 C19orf60Q96EN9 201 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 C5orf30Q96GV9 206 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 TPD52L3Q96J77 140 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 IFT74Q96LB3 600 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 SAMD8Q96LT4 415 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 NSMCE2Q96MF7 247 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 ZBTB18Q99592 522 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 RAD9AQ99638 391 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 SSX3Q99909 188 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 RIOK1Q9BRS2 568 aaKnown RBP3.16□□□□□ -1.9
VPS8-215ENST00000460158 LRRC1Q9BTT6 524 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 CAPS2Q9BXY5 557 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 CCSER1Q9C0I3 900 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 MMP27Q9H306 513 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 HAUS4Q9H6D7 363 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 AKIRIN1Q9H9L7 192 aaPredicted RBP3.16□□□□□ -1.9
VPS8-215ENST00000460158 FKRPQ9H9S5 495 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 VPS18Q9P253 973 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 GAGE2DQ9UEU5 116 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 GMEB2Q9UKD1 530 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 WBP11Q9Y2W2 641 aaKnown RBP3.16□□□□□ -1.9
VPS8-215ENST00000460158 LIPGQ9Y5X9 500 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 DDX49Q9Y6V7 483 aaKnown RBP3.16□□□□□ -1.9
VPS8-215ENST00000460158 MAP3K19Q56UN5 1328 aa3.16□□□□□ -1.9
VPS8-215ENST00000460158 PLEKHG2Q9H7P9 1386 aa3.15□□□□□ -1.9
VPS8-215ENST00000460158 C15orf38-AP3S2A0A0A6YYH1 394 aa3.15□□□□□ -1.91
VPS8-215ENST00000460158 A0A0G2JNG1 304 aa3.15□□□□□ -1.91
VPS8-215ENST00000460158 TEX13DA0A0J9YY54 714 aaPredicted RBP3.15□□□□□ -1.91
VPS8-215ENST00000460158 EDDM13A0A1B0GTR0 161 aa3.15□□□□□ -1.91
VPS8-215ENST00000460158 A0A1B0GWJ7 208 aa3.15□□□□□ -1.91
VPS8-215ENST00000460158 ARHGAP42A6NI28 874 aa3.15□□□□□ -1.91
VPS8-215ENST00000460158 ZSCAN5BA6NJL1 495 aa3.15□□□□□ -1.91
VPS8-215ENST00000460158 ACOD1A6NK06 481 aa3.15□□□□□ -1.91
VPS8-215ENST00000460158 IFITM10A6NMD0 228 aa3.15□□□□□ -1.91
VPS8-215ENST00000460158 NDUFS8O00217 210 aa3.15□□□□□ -1.91
VPS8-215ENST00000460158 CLDN3O15551 220 aa3.15□□□□□ -1.91
VPS8-215ENST00000460158 SSX5O60225 188 aa3.15□□□□□ -1.91
VPS8-215ENST00000460158 CACNG3O60359 315 aa3.15□□□□□ -1.91
VPS8-215ENST00000460158 HSF2BPO75031 334 aa3.15□□□□□ -1.91
VPS8-215ENST00000460158 RHOBTB1O94844 696 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms