RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 ETV6P41212 452 aa15.25■□□□□ 0.03
CMTM3-203ENST00000460097 PTPN5P54829 565 aa15.25■□□□□ 0.03
CMTM3-203ENST00000460097 RAD51Q06609 339 aa15.25■□□□□ 0.03
CMTM3-203ENST00000460097 ELAVL3Q14576 367 aaKnown RBP15.25■□□□□ 0.03
CMTM3-203ENST00000460097 ZNF404Q494X3 552 aa15.25■□□□□ 0.03
CMTM3-203ENST00000460097 C22orf39Q6P5X5 142 aa15.25■□□□□ 0.03
CMTM3-203ENST00000460097 GPRIN3Q6ZVF9 776 aa15.25■□□□□ 0.03
CMTM3-203ENST00000460097 Q6ZVU0 165 aa15.25■□□□□ 0.03
CMTM3-203ENST00000460097 B3GNT8Q7Z7M8 397 aa15.25■□□□□ 0.03
CMTM3-203ENST00000460097 WDR5BQ86VZ2 330 aa15.25■□□□□ 0.03
CMTM3-203ENST00000460097 STK40Q8N2I9 435 aa15.25■□□□□ 0.03
CMTM3-203ENST00000460097 OR2T11Q8NH01 316 aa15.25■□□□□ 0.03
CMTM3-203ENST00000460097 MCFD2Q8NI22 146 aa15.25■□□□□ 0.03
CMTM3-203ENST00000460097 CCDC97Q96F63 343 aaPredicted RBP15.25■□□□□ 0.03
CMTM3-203ENST00000460097 SIPA1Q96FS4 1042 aa15.25■□□□□ 0.03
CMTM3-203ENST00000460097 APOL4Q9BPW4 351 aa15.25■□□□□ 0.03
CMTM3-203ENST00000460097 CARS2Q9HA77 564 aaKnown RBP15.25■□□□□ 0.03
CMTM3-203ENST00000460097 PDFQ9HBH1 243 aa15.25■□□□□ 0.03
CMTM3-203ENST00000460097 ACOT13Q9NPJ3 140 aa15.25■□□□□ 0.03
CMTM3-203ENST00000460097 CCDC59Q9P031 241 aaKnown RBP15.25■□□□□ 0.03
CMTM3-203ENST00000460097 ADGRE2Q9UHX3 823 aa15.25■□□□□ 0.03
CMTM3-203ENST00000460097 ELOVL7A1L3X0 281 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 LRRC14BA6NHZ5 514 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 FAM220BPB1ANY3 271 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 PTGES3LE9PB15 166 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 E9PQ18 207 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 GNGT2O14610 69 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 GSTA4O15217 222 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 RGS10O43665 173 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 ZNF821O75541 412 aaPredicted RBP15.24■□□□□ 0.03
CMTM3-203ENST00000460097 MMP2P08253 660 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 ATXN1LP0C7T5 689 aaKnown RBP15.24■□□□□ 0.03
CMTM3-203ENST00000460097 HLA-DPA1P20036 260 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 CASP3P42574 277 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 RECQLP46063 649 aaPredicted RBP15.24■□□□□ 0.03
CMTM3-203ENST00000460097 STC1P52823 247 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 PIGFQ07326 219 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 NKG7Q16617 165 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 ATG9BQ674R7 924 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 PAGE2Q7Z2X7 111 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 PLD3Q8IV08 490 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 PLPP6Q8IY26 295 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 FNDC5Q8NAU1 212 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 OR2A12Q8NGT7 310 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 SLC38A4Q969I6 547 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 FAM129BQ96TA1 746 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 TPSD1Q9BZJ3 242 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 SLC6A17Q9H1V8 727 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 RSPH9Q9H1X1 276 aaPredicted RBP15.24■□□□□ 0.03
CMTM3-203ENST00000460097 TNKS2Q9H2K2 1166 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 SIAEQ9HAT2 523 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 TAS2R13Q9NYV9 303 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 ZNF225Q9UK10 706 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 V9GYQ6 96 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 CKAP5Q14008 2032 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 OR2A25A4D2G3 310 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 ANKRD34BA5PLL1 514 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 HS6ST1O60243 411 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 FGF1P05230 155 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 ACADMP11310 421 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 VBP1P61758 197 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 CAMK2BQ13554 666 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 CARD16Q5EG05 197 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 SPESP1Q6UW49 350 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 KIAA1324Q6UXG2 1013 aaKnown RBP15.24■□□□□ 0.03
CMTM3-203ENST00000460097 Q6ZSR9 355 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 TSPYL5Q86VY4 417 aaPredicted RBP15.24■□□□□ 0.03
CMTM3-203ENST00000460097 HEATR4Q86WZ0 1026 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 ZBTB44Q8NCP5 570 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 OR8D1Q8WZ84 308 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 EXT2Q93063 718 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 FUBP1Q96AE4 644 aaKnown RBP15.24■□□□□ 0.03
CMTM3-203ENST00000460097 PDLIM5Q96HC4 596 aaKnown RBP15.24■□□□□ 0.03
CMTM3-203ENST00000460097 PPM1MQ96MI6 270 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 CCDC90BQ9GZT6 254 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 ACTL8Q9H568 366 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 SEMA4BQ9NPR2 832 aaPredicted RBP15.24■□□□□ 0.03
CMTM3-203ENST00000460097 ASIC5Q9NY37 505 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 ERVK-18Q9QC07 812 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 VPS9D1Q9Y2B5 631 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 PCDHGA2Q9Y5H1 932 aa15.24■□□□□ 0.03
CMTM3-203ENST00000460097 A0A1B0GTL3 188 aa15.23■□□□□ 0.03
CMTM3-203ENST00000460097 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.23■□□□□ 0.03
CMTM3-203ENST00000460097 CXCR6O00574 342 aa15.23■□□□□ 0.03
CMTM3-203ENST00000460097 SCO2O43819 266 aa15.23■□□□□ 0.03
CMTM3-203ENST00000460097 NOBOXO60393 691 aa15.23■□□□□ 0.03
CMTM3-203ENST00000460097 KRT75O95678 551 aa15.23■□□□□ 0.03
CMTM3-203ENST00000460097 PCNAP12004 261 aa15.23■□□□□ 0.03
CMTM3-203ENST00000460097 NR4A1P22736 598 aa15.23■□□□□ 0.03
CMTM3-203ENST00000460097 TGFBR2P37173 567 aa15.23■□□□□ 0.03
CMTM3-203ENST00000460097 CASP2P42575 452 aa15.23■□□□□ 0.03
CMTM3-203ENST00000460097 MASP1P48740 699 aa15.23■□□□□ 0.03
CMTM3-203ENST00000460097 MTPNP58546 118 aa15.23■□□□□ 0.03
CMTM3-203ENST00000460097 RPS14P62263 151 aaKnown RBP15.23■□□□□ 0.03
CMTM3-203ENST00000460097 SNRPD1P62314 119 aaKnown RBP15.23■□□□□ 0.03
CMTM3-203ENST00000460097 IL5RAQ01344 420 aa15.23■□□□□ 0.03
CMTM3-203ENST00000460097 USP39Q53GS9 565 aaKnown RBP15.23■□□□□ 0.03
CMTM3-203ENST00000460097 SIRPB2Q5JXA9 342 aa15.23■□□□□ 0.03
CMTM3-203ENST00000460097 ZNF776Q68DI1 518 aaPredicted RBP15.23■□□□□ 0.03
CMTM3-203ENST00000460097 CYP20A1Q6UW02 462 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms