RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 PRAP1Q96NZ9 151 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 TUBB6Q9BUF5 446 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 ZNF700Q9H0M5 742 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 PLAC1Q9HBJ0 212 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 PPANQ9NQ55 473 aaKnown RBP9.5□□□□□ -0.89
HDLBP-228ENST00000459788 AGPAT4Q9NRZ5 378 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 ARL15Q9NXU5 204 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 WHRNQ9P202 907 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 TRPC4Q9UBN4 977 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 C19orf25Q9UFG5 118 aaPredicted RBP9.5□□□□□ -0.89
HDLBP-228ENST00000459788 TSR3Q9UJK0 312 aaKnown RBP9.5□□□□□ -0.89
HDLBP-228ENST00000459788 ADAMTS6Q9UKP5 1117 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 CHMP2BQ9UQN3 213 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 PCDHGA10Q9Y5H3 936 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 MAU2Q9Y6X3 613 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 CENPEQ02224 2701 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 IGHV1-45A0A0A0MS14 117 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 NSG1A0A0A6YYJ2 146 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 TRBC2A0A5B9 178 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 USP27XA6NNY8 438 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 EFCAB8A8MWE9 144 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 TP73O15350 636 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 TTI1O43156 1089 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 NRP2O60462 931 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 HEXBP07686 556 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 COX6A1P12074 109 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 GP1BBP13224 206 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 ZNF37AP17032 561 aaPredicted RBP9.49□□□□□ -0.89
HDLBP-228ENST00000459788 GSTM2P28161 218 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 SOX11P35716 441 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 AHRP35869 848 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 BCL6P41182 706 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 AGTR2P50052 363 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 MEF2AQ02078 507 aaPredicted RBP9.49□□□□□ -0.89
HDLBP-228ENST00000459788 CAV1Q03135 178 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 SRSF1Q07955 248 aaKnown RBP eCLIP9.49□□□□□ -0.89
HDLBP-228ENST00000459788 CALCOCO2Q13137 446 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 NAE1Q13564 534 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 HERC3Q15034 1050 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 VWA2Q5GFL6 755 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 CDKL4Q5MAI5 379 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 RBM20Q5T481 1227 aaKnown RBP9.49□□□□□ -0.89
HDLBP-228ENST00000459788 VN1R4Q7Z5H5 301 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 ADAMTSL2Q86TH1 951 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 ASPGQ86U10 573 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 ZC3HC1Q86WB0 502 aaKnown RBP9.49□□□□□ -0.89
HDLBP-228ENST00000459788 KLHL7Q8IXQ5 586 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 KLHDC8AQ8IYD2 350 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 MFSD9Q8NBP5 474 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 METTL21AQ8WXB1 218 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 THOC3Q96J01 351 aaKnown RBP9.49□□□□□ -0.89
HDLBP-228ENST00000459788 CAPZA3Q96KX2 299 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 PSMG3-AS1Q96PY0 264 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 OR1F2PQ96R84 312 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 NDNQ99608 321 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 ERP44Q9BS26 406 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 MCMBPQ9BTE3 642 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 PITHD1Q9GZP4 211 aaPredicted RBP9.49□□□□□ -0.89
HDLBP-228ENST00000459788 RHOJQ9H4E5 214 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 PELI2Q9HAT8 420 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 ANKHQ9HCJ1 492 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 COPG1Q9Y678 874 aaKnown RBP9.49□□□□□ -0.89
HDLBP-228ENST00000459788 UTP20O75691 2785 aaKnown RBP9.49□□□□□ -0.89
HDLBP-228ENST00000459788 UNC79Q9P2D8 2635 aa9.49□□□□□ -0.89
HDLBP-228ENST00000459788 A0A0A6YYC8 382 aaPredicted RBP9.48□□□□□ -0.89
HDLBP-228ENST00000459788 SYNDIG1LA6NDD5 238 aa9.48□□□□□ -0.89
HDLBP-228ENST00000459788 URADA6NGE7 173 aa9.48□□□□□ -0.89
HDLBP-228ENST00000459788 I3L1I5 382 aaPredicted RBP9.48□□□□□ -0.89
HDLBP-228ENST00000459788 P2RX6O15547 441 aa9.48□□□□□ -0.89
HDLBP-228ENST00000459788 ALOX12BO75342 701 aa9.48□□□□□ -0.89
HDLBP-228ENST00000459788 CBX6O95503 412 aa9.48□□□□□ -0.89
HDLBP-228ENST00000459788 PRR35P0CG20 571 aa9.48□□□□□ -0.89
HDLBP-228ENST00000459788 GNLYP22749 145 aa9.48□□□□□ -0.89
HDLBP-228ENST00000459788 POU4F1Q01851 419 aa9.48□□□□□ -0.89
HDLBP-228ENST00000459788 PDIA2Q13087 525 aaKnown RBP9.48□□□□□ -0.89
HDLBP-228ENST00000459788 ZNF169Q14929 603 aaPredicted RBP9.48□□□□□ -0.89
HDLBP-228ENST00000459788 PHKG1Q16816 387 aa9.48□□□□□ -0.89
HDLBP-228ENST00000459788 PPP1R3AQ16821 1122 aa9.48□□□□□ -0.89
HDLBP-228ENST00000459788 TRMT10BQ6PF06 316 aaKnown RBP9.48□□□□□ -0.89
HDLBP-228ENST00000459788 SBSNQ6UWP8 590 aa9.48□□□□□ -0.89
HDLBP-228ENST00000459788 ZC3H7AQ8IWR0 971 aaKnown RBP9.48□□□□□ -0.89
HDLBP-228ENST00000459788 AFAP1L2Q8N4X5 818 aa9.48□□□□□ -0.89
HDLBP-228ENST00000459788 METTL27Q8N6F8 245 aaPredicted RBP9.48□□□□□ -0.89
HDLBP-228ENST00000459788 FBXO36Q8NEA4 188 aa9.48□□□□□ -0.89
HDLBP-228ENST00000459788 PLPP5Q8NEB5 264 aa9.48□□□□□ -0.89
HDLBP-228ENST00000459788 TRPV3Q8NET8 790 aa9.48□□□□□ -0.89
HDLBP-228ENST00000459788 DNAJB14Q8TBM8 379 aa9.48□□□□□ -0.89
HDLBP-228ENST00000459788 SLC13A3Q8WWT9 602 aa9.48□□□□□ -0.89
HDLBP-228ENST00000459788 CDKL2Q92772 493 aa9.48□□□□□ -0.89
HDLBP-228ENST00000459788 HAS2Q92819 552 aa9.48□□□□□ -0.89
HDLBP-228ENST00000459788 SNRNP40Q96DI7 357 aaKnown RBP9.48□□□□□ -0.89
HDLBP-228ENST00000459788 TSPAN17Q96FV3 270 aa9.48□□□□□ -0.89
HDLBP-228ENST00000459788 CFAP36Q96G28 342 aa9.48□□□□□ -0.89
HDLBP-228ENST00000459788 IMMP1LQ96LU5 166 aa9.48□□□□□ -0.89
HDLBP-228ENST00000459788 WDR83Q9BRX9 315 aaKnown RBP9.48□□□□□ -0.89
HDLBP-228ENST00000459788 CAPS2Q9BXY5 557 aa9.48□□□□□ -0.89
HDLBP-228ENST00000459788 MFRPQ9BY79 579 aa9.48□□□□□ -0.89
HDLBP-228ENST00000459788 SYNPO2LQ9H987 977 aa9.48□□□□□ -0.89
HDLBP-228ENST00000459788 TEKT2Q9UIF3 430 aa9.48□□□□□ -0.89
HDLBP-228ENST00000459788 PCDHGB6Q9Y5F9 930 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms