RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 STK16O75716 305 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 ENO2P09104 434 aaPredicted RBP9.95□□□□□ -0.82
USP39-210ENST00000459775 SLC6A12P48065 614 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 TBPL1P62380 186 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 TAP2Q03519 686 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 GTF2H2Q13888 395 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 GPR18Q14330 331 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 MAPRE2Q15555 327 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 TEAD4Q15561 434 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 GTF2H2CQ6P1K8 395 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 LETMD1Q6P1Q0 360 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 PLEKHM3Q6ZWE6 761 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 CPLX4Q7Z7G2 160 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 CUZD1Q86UP6 607 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 LRRC56Q8IYG6 542 aaPredicted RBP9.95□□□□□ -0.82
USP39-210ENST00000459775 SNX31Q8N9S9 440 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 MAPK15Q8TD08 544 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 FBXL8Q96CD0 374 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 CXorf40BQ96DE9 158 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 CCDC126Q96EE4 140 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 ELF4Q99607 663 aaPredicted RBP9.95□□□□□ -0.82
USP39-210ENST00000459775 GTPBP2Q9BX10 602 aaKnown RBP9.95□□□□□ -0.82
USP39-210ENST00000459775 SLC40A1Q9NP59 571 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 EMC3Q9P0I2 261 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 CPNE7Q9UBL6 633 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 OPTCQ9UBM4 332 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 PCOLCE2Q9UKZ9 415 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 DOLKQ9UPQ8 538 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 KLHL20Q9Y2M5 609 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 PPM1DO15297 605 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 HDAC3O15379 428 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 OR4F21O95013 312 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 GIMD1P0DJR0 217 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 PNLIPRP1P54315 467 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 AP1S2P56377 157 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 ERVPABLB-1P60509 514 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 HNRNPKP61978 463 aaKnown RBP eCLIP9.95□□□□□ -0.82
USP39-210ENST00000459775 PPP1CAP62136 330 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 MEF2AQ02078 507 aaPredicted RBP9.95□□□□□ -0.82
USP39-210ENST00000459775 PCBP2Q15366 365 aaKnown RBP eCLIP9.95□□□□□ -0.82
USP39-210ENST00000459775 ELOCQ15369 112 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 GFOD2Q3B7J2 385 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 ADNP2Q6IQ32 1131 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 ZNF438Q7Z4V0 828 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 THOC6Q86W42 341 aaKnown RBP9.95□□□□□ -0.82
USP39-210ENST00000459775 NKAIN4Q8IVV8 208 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 RNF175Q8N4F7 328 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 CDYL2Q8N8U2 506 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 TOR1AIP2Q8NFQ8 470 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 FAM174AQ8TBP5 190 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 RAD51AP1Q96B01 352 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 TBC1D10AQ9BXI6 508 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 GAREM1Q9H706 876 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 SPASTQ9UBP0 616 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 RNF11Q9Y3C5 154 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 A0A0G2JND7 137 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 A0A0G2JPF8 293 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 HNRNPCL3B7ZW38 293 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 E7EQ34 232 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 K7EPI3 171 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 BTN3A3O00478 584 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 FFAR3O14843 346 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 GPR42O15529 346 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 NOBOXO60393 691 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 NPHS1O60500 1241 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 HNRNPCL4P0DMR1 293 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 NPPBP16860 134 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 GGT5P36269 586 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 CDKL1Q00532 357 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 VAC14Q08AM6 782 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 CATSPEREQ5SY80 951 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 TTC23LQ6PF05 361 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 WASH2PQ6VEQ5 465 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 SFRP1Q8N474 314 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 OR4F6Q8NGB9 312 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 OR56A3Q8NH54 315 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 BCAS4Q8TDM0 211 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 MTFMTQ96DP5 389 aaKnown RBP9.94□□□□□ -0.82
USP39-210ENST00000459775 EBF4Q9BQW3 602 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 ASPSCR1Q9BZE9 553 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 KCNK13Q9HB14 408 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 WASH6PQ9NQA3 447 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 RXFP3Q9NSD7 469 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 FARSBQ9NSD9 589 aaKnown RBP9.94□□□□□ -0.82
USP39-210ENST00000459775 BTRCQ9Y297 605 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 NCOR2Q9Y618 2525 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 ARHGEF17Q96PE2 2063 aaPredicted RBP9.94□□□□□ -0.82
USP39-210ENST00000459775 A0A1W2PPV9 198 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 TMEM114B3SHH9 223 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 LMO7DNF2Z398 122 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 TRIM38O00635 465 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 OR5F1O95221 314 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 VIPP01282 170 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 CD22P20273 847 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 S100A1P23297 94 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 NOS3P29474 1203 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 PEBP1P30086 187 aaKnown RBP9.94□□□□□ -0.82
USP39-210ENST00000459775 MPLP40238 635 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 LCP2Q13094 533 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 PLCL1Q15111 1095 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms