RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 MMP25Q9NPA2 562 aa9.85□□□□□ -0.83
HDLBP-227ENST00000458564 GALPQ9UBC7 116 aa9.85□□□□□ -0.83
HDLBP-227ENST00000458564 TSR3Q9UJK0 312 aaKnown RBP9.85□□□□□ -0.83
HDLBP-227ENST00000458564 VPS9D1Q9Y2B5 631 aa9.85□□□□□ -0.83
HDLBP-227ENST00000458564 MEMO1Q9Y316 297 aa9.85□□□□□ -0.83
HDLBP-227ENST00000458564 SCN2AQ99250 2005 aa9.84□□□□□ -0.83
HDLBP-227ENST00000458564 C19orf84I3L1E1 186 aa9.84□□□□□ -0.83
HDLBP-227ENST00000458564 GFYI3L273 518 aa9.84□□□□□ -0.83
HDLBP-227ENST00000458564 KIF5CO60282 957 aa9.84□□□□□ -0.83
HDLBP-227ENST00000458564 ZSCAN5DPP0CG00 497 aa9.84□□□□□ -0.83
HDLBP-227ENST00000458564 ESRRAP11474 423 aaPredicted RBP9.84□□□□□ -0.83
HDLBP-227ENST00000458564 CHRM3P20309 590 aa9.84□□□□□ -0.83
HDLBP-227ENST00000458564 CAPN3P20807 821 aa9.84□□□□□ -0.83
HDLBP-227ENST00000458564 HRH2P25021 359 aa9.84□□□□□ -0.83
HDLBP-227ENST00000458564 CLCN7P51798 805 aa9.84□□□□□ -0.83
HDLBP-227ENST00000458564 ZNF75DP51815 510 aa9.84□□□□□ -0.83
HDLBP-227ENST00000458564 RPS15AP62244 130 aaKnown RBP9.84□□□□□ -0.83
HDLBP-227ENST00000458564 SIX1Q15475 284 aaPredicted RBP9.84□□□□□ -0.83
HDLBP-227ENST00000458564 CDSNQ15517 529 aa9.84□□□□□ -0.83
HDLBP-227ENST00000458564 OR1C1Q15619 314 aa9.84□□□□□ -0.83
HDLBP-227ENST00000458564 MEP1AQ16819 746 aa9.84□□□□□ -0.83
HDLBP-227ENST00000458564 TTLL9Q3SXZ7 439 aa9.84□□□□□ -0.83
HDLBP-227ENST00000458564 MINDY4Q4G0A6 757 aa9.84□□□□□ -0.83
HDLBP-227ENST00000458564 TMEM214Q6NUQ4 689 aaKnown RBP9.84□□□□□ -0.83
HDLBP-227ENST00000458564 SPNS3Q6ZMD2 512 aa9.84□□□□□ -0.83
HDLBP-227ENST00000458564 ANKRD37Q7Z713 158 aa9.84□□□□□ -0.83
HDLBP-227ENST00000458564 CILP2Q8IUL8 1156 aa9.84□□□□□ -0.83
HDLBP-227ENST00000458564 TMEM139Q8IV31 216 aa9.84□□□□□ -0.83
HDLBP-227ENST00000458564 SIAH3Q8IW03 269 aa9.84□□□□□ -0.83
HDLBP-227ENST00000458564 REXO1L1PQ8IX06 675 aa9.84□□□□□ -0.83
HDLBP-227ENST00000458564 RNF10Q8N5U6 811 aaKnown RBP9.84□□□□□ -0.83
HDLBP-227ENST00000458564 AMER2Q8N7J2 671 aa9.84□□□□□ -0.83
HDLBP-227ENST00000458564 PPFIBP2Q8ND30 876 aa9.84□□□□□ -0.83
HDLBP-227ENST00000458564 OR51Q1Q8NH59 317 aa9.84□□□□□ -0.83
HDLBP-227ENST00000458564 GIMAP7Q8NHV1 300 aa9.84□□□□□ -0.83
HDLBP-227ENST00000458564 M1APQ8TC57 530 aa9.84□□□□□ -0.83
HDLBP-227ENST00000458564 PHF10Q8WUB8 498 aaKnown RBP9.84□□□□□ -0.83
HDLBP-227ENST00000458564 ASB11Q8WXH4 323 aa9.84□□□□□ -0.83
HDLBP-227ENST00000458564 KCNJ9Q92806 393 aa9.84□□□□□ -0.83
HDLBP-227ENST00000458564 FAM136AQ96C01 138 aa9.84□□□□□ -0.83
HDLBP-227ENST00000458564 THAP11Q96EK4 314 aa9.84□□□□□ -0.83
HDLBP-227ENST00000458564 SIGLEC12Q96PQ1 595 aa9.84□□□□□ -0.83
HDLBP-227ENST00000458564 NPAS2Q99743 824 aa9.84□□□□□ -0.83
HDLBP-227ENST00000458564 SPOCK3Q9BQ16 436 aa9.84□□□□□ -0.83
HDLBP-227ENST00000458564 TREX2Q9BQ50 279 aaPredicted RBP9.84□□□□□ -0.83
HDLBP-227ENST00000458564 GPAMQ9HCL2 828 aa9.84□□□□□ -0.83
HDLBP-227ENST00000458564 INTS10Q9NVR2 710 aaKnown RBP9.84□□□□□ -0.83
HDLBP-227ENST00000458564 SYBUQ9NX95 663 aa9.84□□□□□ -0.83
HDLBP-227ENST00000458564 SOX13Q9UN79 622 aa9.84□□□□□ -0.83
HDLBP-227ENST00000458564 CRYL1Q9Y2S2 319 aa9.84□□□□□ -0.83
HDLBP-227ENST00000458564 MED16Q9Y2X0 877 aa9.84□□□□□ -0.83
HDLBP-227ENST00000458564 IGHV3-20A0A0C4DH32 117 aa9.83□□□□□ -0.84
HDLBP-227ENST00000458564 A8MUI8 341 aa9.83□□□□□ -0.84
HDLBP-227ENST00000458564 GOLGA8KD6RF30 607 aa9.83□□□□□ -0.84
HDLBP-227ENST00000458564 E5RI56 91 aa9.83□□□□□ -0.84
HDLBP-227ENST00000458564 GOLGA8TH3BQL2 631 aa9.83□□□□□ -0.84
HDLBP-227ENST00000458564 ENO3P13929 434 aaPredicted RBP9.83□□□□□ -0.84
HDLBP-227ENST00000458564 CD46P15529 392 aa9.83□□□□□ -0.84
HDLBP-227ENST00000458564 TPSB2P20231 275 aa9.83□□□□□ -0.84
HDLBP-227ENST00000458564 MGAT1P26572 445 aa9.83□□□□□ -0.84
HDLBP-227ENST00000458564 IMPA1P29218 277 aa9.83□□□□□ -0.84
HDLBP-227ENST00000458564 EEF1DP29692 281 aaKnown RBP9.83□□□□□ -0.84
HDLBP-227ENST00000458564 CD96P40200 585 aa9.83□□□□□ -0.84
HDLBP-227ENST00000458564 BCL6P41182 706 aa9.83□□□□□ -0.84
HDLBP-227ENST00000458564 KIR3DL1P43629 444 aa9.83□□□□□ -0.84
HDLBP-227ENST00000458564 XCR1P46094 333 aa9.83□□□□□ -0.84
HDLBP-227ENST00000458564 BASP1P80723 227 aaKnown RBP9.83□□□□□ -0.84
HDLBP-227ENST00000458564 ALDH6A1Q02252 535 aaKnown RBP9.83□□□□□ -0.84
HDLBP-227ENST00000458564 SNX1Q13596 522 aa9.83□□□□□ -0.84
HDLBP-227ENST00000458564 TSTA3Q13630 321 aaPredicted RBP9.83□□□□□ -0.84
HDLBP-227ENST00000458564 TPSAB1Q15661 275 aa9.83□□□□□ -0.84
HDLBP-227ENST00000458564 CCNG2Q16589 344 aa9.83□□□□□ -0.84
HDLBP-227ENST00000458564 FCRLBQ6BAA4 426 aa9.83□□□□□ -0.84
HDLBP-227ENST00000458564 CENPUQ71F23 418 aa9.83□□□□□ -0.84
HDLBP-227ENST00000458564 PRSS41Q7RTY9 318 aa9.83□□□□□ -0.84
HDLBP-227ENST00000458564 ADCK2Q7Z695 626 aa9.83□□□□□ -0.84
HDLBP-227ENST00000458564 CRLF3Q8IUI8 442 aa9.83□□□□□ -0.84
HDLBP-227ENST00000458564 PLD3Q8IV08 490 aa9.83□□□□□ -0.84
HDLBP-227ENST00000458564 CHERPQ8IWX8 916 aaKnown RBP9.83□□□□□ -0.84
HDLBP-227ENST00000458564 SLC5A8Q8N695 610 aa9.83□□□□□ -0.84
HDLBP-227ENST00000458564 HORMAD2Q8N7B1 307 aa9.83□□□□□ -0.84
HDLBP-227ENST00000458564 TMEM178AQ8NBL3 297 aa9.83□□□□□ -0.84
HDLBP-227ENST00000458564 MCOLN3Q8TDD5 553 aa9.83□□□□□ -0.84
HDLBP-227ENST00000458564 OR1F2PQ96R84 312 aa9.83□□□□□ -0.84
HDLBP-227ENST00000458564 SLC30A3Q99726 388 aa9.83□□□□□ -0.84
HDLBP-227ENST00000458564 BAG1Q99933 345 aaPredicted RBP9.83□□□□□ -0.84
HDLBP-227ENST00000458564 UTP23Q9BRU9 249 aaKnown RBP9.83□□□□□ -0.84
HDLBP-227ENST00000458564 TRIM51Q9BSJ1 452 aa9.83□□□□□ -0.84
HDLBP-227ENST00000458564 HES7Q9BYE0 225 aa9.83□□□□□ -0.84
HDLBP-227ENST00000458564 FAM129AQ9BZQ8 928 aa9.83□□□□□ -0.84
HDLBP-227ENST00000458564 ENKD1Q9H0I2 346 aa9.83□□□□□ -0.84
HDLBP-227ENST00000458564 KCNK13Q9HB14 408 aa9.83□□□□□ -0.84
HDLBP-227ENST00000458564 TMEM184CQ9NVA4 438 aa9.83□□□□□ -0.84
HDLBP-227ENST00000458564 ZKSCAN5Q9Y2L8 839 aa9.83□□□□□ -0.84
HDLBP-227ENST00000458564 GABRR3A8MPY1 467 aa9.82□□□□□ -0.84
HDLBP-227ENST00000458564 E9PLN8 166 aa9.82□□□□□ -0.84
HDLBP-227ENST00000458564 FAM227AF5H4B4 570 aa9.82□□□□□ -0.84
HDLBP-227ENST00000458564 H7BY64 318 aa9.82□□□□□ -0.84
HDLBP-227ENST00000458564 EIF3FO00303 357 aaPredicted RBP9.82□□□□□ -0.84
HDLBP-227ENST00000458564 ASNA1O43681 348 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms