RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 WDR45BQ5MNZ6 344 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 C6orf136Q5SQH8 315 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 NXPE4Q6UWF7 544 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 SLCO4C1Q6ZQN7 724 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 RD3Q7Z3Z2 195 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 RBM12BQ8IXT5 1001 aaKnown RBP8.62□□□□□ -1.03
VPS50-207ENST00000458530 POU5F2Q8N7G0 328 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 KYQ8NBH2 561 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 GLB1L3Q8NCI6 653 aaPredicted RBP8.62□□□□□ -1.03
VPS50-207ENST00000458530 PPFIBP2Q8ND30 876 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 RBM15BQ8NDT2 890 aaKnown RBP8.62□□□□□ -1.03
VPS50-207ENST00000458530 SNIP1Q8TAD8 396 aaKnown RBP8.62□□□□□ -1.03
VPS50-207ENST00000458530 SLC22A18Q96BI1 424 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 MARK4Q96L34 752 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 CAMK1GQ96NX5 476 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 INSM2Q96T92 566 aaPredicted RBP8.62□□□□□ -1.03
VPS50-207ENST00000458530 AIF1LQ9BQI0 150 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 TBC1D10AQ9BXI6 508 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 RASSF4Q9H2L5 321 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 TAS2R1Q9NYW7 299 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 OR6C2Q9NZP2 312 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 PRPF19Q9UMS4 504 aaKnown RBP8.62□□□□□ -1.03
VPS50-207ENST00000458530 CA5BQ9Y2D0 317 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 NDUFAF1Q9Y375 327 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 TSC22D4Q9Y3Q8 395 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 PCDHB11Q9Y5F2 797 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 PTGDR2Q9Y5Y4 395 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 KALRNO60229 2985 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 TNRC6BQ9UPQ9 1833 aaKnown RBP8.61□□□□□ -1.03
VPS50-207ENST00000458530 FAM234BA2RU67 622 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 FOXE1O00358 373 aaPredicted RBP8.61□□□□□ -1.03
VPS50-207ENST00000458530 SEC22BO75396 215 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 SLC22A3O75751 556 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 FKBP9O95302 570 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 PDYNP01213 254 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 FUCA1P04066 466 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 ALDOCP09972 364 aaKnown RBP8.61□□□□□ -1.03
VPS50-207ENST00000458530 PCNAP12004 261 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 NPPBP16860 134 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 BCKDHBP21953 392 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 GPX3P22352 226 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 JAK1P23458 1154 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 PIK3CBP42338 1070 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 CPA2P48052 419 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 CCR8P51685 355 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 ACSM2AQ08AH3 577 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 PRKG2Q13237 762 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 SLBPQ14493 270 aaKnown RBP eCLIP8.61□□□□□ -1.03
VPS50-207ENST00000458530 ELOCQ15369 112 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 SGO1Q5FBB7 561 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 TCHHL1Q5QJ38 904 aaPredicted RBP8.61□□□□□ -1.03
VPS50-207ENST00000458530 ACSM2BQ68CK6 577 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 PRMT9Q6P2P2 845 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 SLC30A9Q6PML9 568 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 SCIMPQ6UWF3 145 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 HACD2Q6Y1H2 254 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 RINLQ6ZS11 566 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 Q6ZSR9 355 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 LRRC56Q8IYG6 542 aaPredicted RBP8.61□□□□□ -1.03
VPS50-207ENST00000458530 SDR16C5Q8N3Y7 309 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 SFRP1Q8N474 314 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 KIF2BQ8N4N8 673 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 TTLQ8NG68 377 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 OR2T11Q8NH01 316 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 GPBAR1Q8TDU6 330 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 RLN3Q8WXF3 142 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 NEIL2Q969S2 332 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 TSACCQ96A04 125 aaPredicted RBP8.61□□□□□ -1.03
VPS50-207ENST00000458530 ROPN1LQ96C74 230 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 OR4K3Q96R72 315 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 CENPKQ9BS16 269 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 ACPTQ9BZG2 426 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 TMEM168Q9H0V1 697 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 NT5DC2Q9H857 520 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 PRDM8Q9NQV8 689 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 POT1Q9NUX5 634 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 GID8Q9NWU2 228 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 CCDC167Q9P0B6 97 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 VPS29Q9UBQ0 182 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 BCAP29Q9UHQ4 241 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 PPT2Q9UMR5 302 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 RUVBL1Q9Y265 456 aaKnown RBP8.61□□□□□ -1.03
VPS50-207ENST00000458530 WDR37Q9Y2I8 494 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 POLR3HQ9Y535 204 aaPredicted RBP8.61□□□□□ -1.03
VPS50-207ENST00000458530 GPR45Q9Y5Y3 372 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 CFAP20Q9Y6A4 193 aaKnown RBP8.61□□□□□ -1.03
VPS50-207ENST00000458530 CROCCQ5TZA2 2017 aa8.61□□□□□ -1.03
VPS50-207ENST00000458530 PI4KAP42356 2102 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 C15orf38-AP3S2A0A0A6YYH1 394 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 LOC100653049A0A140TA62 436 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 PIPSLA2A3N6 862 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 KRT87PA6NCN2 255 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 NR5A2O00482 541 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 MRASO14807 208 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 AIM2O14862 343 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 GSC2O15499 205 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 CFLARO15519 480 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 NRP2O60462 931 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 PRMT3O60678 531 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 KRT34O76011 436 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms