RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 PEX11BO96011 259 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 FGBP02675 491 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 CNPP09543 421 aaKnown RBP6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 OR4E1P0C645 316 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 ITGAMP11215 1152 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 ZNF250P15622 560 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 PTAFRP25105 342 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 LAP3P28838 519 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 CRABP1P29762 137 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 GDI1P31150 447 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 CEACAM6P40199 344 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 WNT5AP41221 380 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 RPL21P46778 160 aaKnown RBP6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 NRLP54845 237 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 ARL4CP56559 192 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 CD81P60033 236 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 MRPS22P82650 360 aaKnown RBP6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 DEFA6Q01524 100 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 CLCQ05315 142 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 PUDPQ08623 228 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 FGL1Q08830 312 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 BTN1A1Q13410 526 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 RAB33AQ14088 237 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 FGL2Q14314 439 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 HNF4GQ14541 408 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 ETFDHQ16134 617 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 PROX2Q3B8N5 592 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 UGT3A2Q3SY77 523 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 MGAT5BQ3V5L5 792 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 LIPIQ6XZB0 460 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 ZNF574Q6ZN55 896 aaPredicted RBP6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 MSANTD1Q6ZTZ1 278 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 DENND5BQ6ZUT9 1274 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 RFX8Q6ZV50 586 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 USP53Q70EK8 1073 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 C16orf62Q7Z3J2 963 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 SNX20Q7Z614 316 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 RAB43Q86YS6 212 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 RFX6Q8HWS3 928 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 SCN4BQ8IWT1 228 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 CBARPQ8N350 705 aaPredicted RBP6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 SFRP1Q8N474 314 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 DMBX1Q8NFW5 382 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 OR4M1Q8NGD0 313 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 DCAKDQ8WVC6 231 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 OVCA2Q8WZ82 227 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 TMCO6Q96DC7 493 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 RTP4Q96DX8 246 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 HYLS1Q96M11 299 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 GPR137Q96N19 417 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 RILPQ96NA2 401 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 PGLYRP2Q96PD5 576 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 CPEB1Q9BZB8 566 aaKnown RBP6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 PRKD2Q9BZL6 878 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 UCK2Q9BZX2 261 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 ROGDIQ9GZN7 287 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 ZBP1Q9H171 429 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 DHX35Q9H5Z1 703 aaKnown RBP6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 ESRP2Q9H6T0 727 aaKnown RBP6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 PCDH9Q9HC56 1237 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 IMP3Q9NV31 184 aaKnown RBP6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 DDIT4Q9NX09 232 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 OSER1Q9NX31 292 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 ZNF224Q9NZL3 707 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 CXXC1Q9P0U4 656 aaPredicted RBP6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 PSMC3IPQ9P2W1 217 aaPredicted RBP6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 CDV3Q9UKY7 258 aaKnown RBP6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 NEU3Q9UQ49 428 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 VPS9D1Q9Y2B5 631 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 INSL6Q9Y581 213 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 CHD7Q9P2D1 2997 aa6.63□□□□□ -1.35
CUBNP3-201ENST00000457461 CEP290O15078 2479 aa6.62□□□□□ -1.35
CUBNP3-201ENST00000457461 MYO7AQ13402 2215 aa6.62□□□□□ -1.35
CUBNP3-201ENST00000457461 A0A1W2PQH9 124 aa6.62□□□□□ -1.35
CUBNP3-201ENST00000457461 C9orf170A2RU37 121 aa6.62□□□□□ -1.35
CUBNP3-201ENST00000457461 SYNDIG1LA6NDD5 238 aa6.62□□□□□ -1.35
CUBNP3-201ENST00000457461 DCLK1O15075 740 aa6.62□□□□□ -1.35
CUBNP3-201ENST00000457461 STX11O75558 287 aa6.62□□□□□ -1.35
CUBNP3-201ENST00000457461 GABARAPO95166 117 aa6.62□□□□□ -1.35
CUBNP3-201ENST00000457461 IFNA7P01567 189 aa6.62□□□□□ -1.35
CUBNP3-201ENST00000457461 FTH1P02794 183 aa6.62□□□□□ -1.35
CUBNP3-201ENST00000457461 ALPPP05187 535 aa6.62□□□□□ -1.35
CUBNP3-201ENST00000457461 GP1BAP07359 652 aa6.62□□□□□ -1.35
CUBNP3-201ENST00000457461 CTSAP10619 480 aa6.62□□□□□ -1.35
CUBNP3-201ENST00000457461 EDN3P14138 238 aa6.62□□□□□ -1.35
CUBNP3-201ENST00000457461 JUPP14923 745 aa6.62□□□□□ -1.35
CUBNP3-201ENST00000457461 ATF2P15336 505 aa6.62□□□□□ -1.35
CUBNP3-201ENST00000457461 JUNDP17535 347 aa6.62□□□□□ -1.35
CUBNP3-201ENST00000457461 NFKB1P19838 968 aa6.62□□□□□ -1.35
CUBNP3-201ENST00000457461 DDX6P26196 483 aaKnown RBP eCLIP6.62□□□□□ -1.35
CUBNP3-201ENST00000457461 YWHAQP27348 245 aa6.62□□□□□ -1.35
CUBNP3-201ENST00000457461 OR1D2P34982 312 aa6.62□□□□□ -1.35
CUBNP3-201ENST00000457461 CAPGP40121 348 aa6.62□□□□□ -1.35
CUBNP3-201ENST00000457461 RPL35P42766 123 aaKnown RBP6.62□□□□□ -1.35
CUBNP3-201ENST00000457461 AKR1D1P51857 326 aa6.62□□□□□ -1.35
CUBNP3-201ENST00000457461 SLC26A5P58743 744 aa6.62□□□□□ -1.35
CUBNP3-201ENST00000457461 NRG1Q02297 640 aaPredicted RBP6.62□□□□□ -1.35
CUBNP3-201ENST00000457461 SLC3A1Q07837 685 aa6.62□□□□□ -1.35
CUBNP3-201ENST00000457461 EPS8Q12929 822 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms