RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 MFSD4BQ5TF39 518 aa7.59□□□□□ -1.19
NIF3L1-209ENST00000454952 NIPAL1Q6NVV3 410 aa7.59□□□□□ -1.19
NIF3L1-209ENST00000454952 DRICH1Q6PGQ1 229 aaPredicted RBP7.59□□□□□ -1.19
NIF3L1-209ENST00000454952 CPEB2Q7Z5Q1 589 aaKnown RBP7.59□□□□□ -1.19
NIF3L1-209ENST00000454952 ADCK2Q7Z695 626 aa7.59□□□□□ -1.19
NIF3L1-209ENST00000454952 PCGF5Q86SE9 256 aa7.59□□□□□ -1.19
NIF3L1-209ENST00000454952 SLC13A5Q86YT5 568 aaPredicted RBP7.59□□□□□ -1.19
NIF3L1-209ENST00000454952 DTWD1Q8N5C7 304 aa7.59□□□□□ -1.19
NIF3L1-209ENST00000454952 SLC5A8Q8N695 610 aa7.59□□□□□ -1.19
NIF3L1-209ENST00000454952 CHTF18Q8WVB6 975 aa7.59□□□□□ -1.19
NIF3L1-209ENST00000454952 MAIP1Q8WWC4 291 aa7.59□□□□□ -1.19
NIF3L1-209ENST00000454952 LPGAT1Q92604 370 aa7.59□□□□□ -1.19
NIF3L1-209ENST00000454952 GPR137Q96N19 417 aa7.59□□□□□ -1.19
NIF3L1-209ENST00000454952 BIRC8Q96P09 236 aa7.59□□□□□ -1.19
NIF3L1-209ENST00000454952 BAG1Q99933 345 aaPredicted RBP7.59□□□□□ -1.19
NIF3L1-209ENST00000454952 KIFC1Q9BW19 673 aa7.59□□□□□ -1.19
NIF3L1-209ENST00000454952 CCDC68Q9H2F9 335 aa7.59□□□□□ -1.19
NIF3L1-209ENST00000454952 KCNK13Q9HB14 408 aa7.59□□□□□ -1.19
NIF3L1-209ENST00000454952 INTS10Q9NVR2 710 aaKnown RBP7.59□□□□□ -1.19
NIF3L1-209ENST00000454952 TAC3Q9UHF0 121 aa7.59□□□□□ -1.19
NIF3L1-209ENST00000454952 PCYOX1Q9UHG3 505 aa7.59□□□□□ -1.19
NIF3L1-209ENST00000454952 PACSIN2Q9UNF0 486 aaPredicted RBP7.59□□□□□ -1.19
NIF3L1-209ENST00000454952 RUVBL2Q9Y230 463 aaKnown RBP7.59□□□□□ -1.19
NIF3L1-209ENST00000454952 ZKSCAN5Q9Y2L8 839 aa7.59□□□□□ -1.19
NIF3L1-209ENST00000454952 REXO2Q9Y3B8 237 aaKnown RBP7.59□□□□□ -1.19
NIF3L1-209ENST00000454952 CCDC168Q8NDH2 2452 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 ANKRD17O75179 2603 aaKnown RBP7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 MED13LQ71F56 2210 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 KCNE1BA0A087WTH5 132 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 A8MUI8 341 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 ESPNB1AK53 854 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 EIF3FO00303 357 aaPredicted RBP7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 FANCGO15287 622 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 FOXS1O43638 330 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 ZBTB14O43829 449 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 NRP2O60462 931 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 NIPSNAP2O75323 286 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 CLDN14O95500 239 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 SLC16A8O95907 504 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 F10P00742 488 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 CCND1P24385 295 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 NMBRP28336 390 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 GRK3P35626 688 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 BASP1P80723 227 aaKnown RBP7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 MEF2AQ02078 507 aaPredicted RBP7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 CCNG2Q16589 344 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 KLHL38Q2WGJ6 581 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 KIAA0930Q6ICG6 404 aaPredicted RBP7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 LRRC8EQ6NSJ5 796 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 H3F3CQ6NXT2 135 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 SUSD1Q6UWL2 747 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 RAD9BQ6WBX8 426 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 Q6ZPB1 254 aaPredicted RBP7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 GSTA5Q7RTV2 222 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 SPPL2CQ8IUH8 684 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 DEPDC4Q8N2C3 294 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 GHDCQ8N2G8 530 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 ARHGEF39Q8N4T4 335 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 CAMKVQ8NCB2 501 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 ACRBPQ8NEB7 543 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 M1APQ8TC57 530 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 PHF10Q8WUB8 498 aaKnown RBP7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 C1orf54Q8WWF1 131 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 MTFMTQ96DP5 389 aaKnown RBP7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 C14orf79Q96F83 325 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 OR1F2PQ96R84 312 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 CYTH2Q99418 400 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 PKP4Q99569 1192 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 LPAR4Q99677 370 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 SPOCK3Q9BQ16 436 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 MESP1Q9BRJ9 268 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 TRIM8Q9BZR9 551 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 VN1R1Q9GZP7 353 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 ANKHQ9HCJ1 492 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 MMP25Q9NPA2 562 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 HOMER3Q9NSC5 361 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 TMEM184CQ9NVA4 438 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 SAMD15Q9P1V8 674 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 STOX2Q9P2F5 926 aaPredicted RBP7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 SH3BGRL2Q9UJC5 107 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 SOX13Q9UN79 622 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 ZNF835Q9Y2P0 537 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 COMMD10Q9Y6G5 202 aa7.58□□□□□ -1.2
NIF3L1-209ENST00000454952 SCN3AQ9NY46 2000 aa7.57□□□□□ -1.2
NIF3L1-209ENST00000454952 IGKV1-8A0A0C4DH67 115 aa7.57□□□□□ -1.2
NIF3L1-209ENST00000454952 A0A0U1RQJ8 604 aa7.57□□□□□ -1.2
NIF3L1-209ENST00000454952 MAGEB16A2A368 324 aa7.57□□□□□ -1.2
NIF3L1-209ENST00000454952 ASPDHA6ND91 283 aa7.57□□□□□ -1.2
NIF3L1-209ENST00000454952 E7ENX8 843 aa7.57□□□□□ -1.2
NIF3L1-209ENST00000454952 FAM227AF5H4B4 570 aa7.57□□□□□ -1.2
NIF3L1-209ENST00000454952 PRRG2O14669 202 aa7.57□□□□□ -1.2
NIF3L1-209ENST00000454952 FFAR3O14843 346 aa7.57□□□□□ -1.2
NIF3L1-209ENST00000454952 HAT1O14929 419 aa7.57□□□□□ -1.2
NIF3L1-209ENST00000454952 GPR42O15529 346 aa7.57□□□□□ -1.2
NIF3L1-209ENST00000454952 SEC24DO94855 1032 aaPredicted RBP7.57□□□□□ -1.2
NIF3L1-209ENST00000454952 TSPAN12O95859 305 aa7.57□□□□□ -1.2
NIF3L1-209ENST00000454952 SYF2O95926 243 aaKnown RBP7.57□□□□□ -1.2
NIF3L1-209ENST00000454952 CELA2AP08217 269 aa7.57□□□□□ -1.2
NIF3L1-209ENST00000454952 SNRPB2P08579 225 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms