RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 RRP15Q9Y3B9 282 aaKnown RBP5.76□□□□□ -1.49
SDC4P-201ENST00000453285 POLR3HQ9Y535 204 aaPredicted RBP5.76□□□□□ -1.49
SDC4P-201ENST00000453285 CSNK1G3Q9Y6M4 447 aa5.76□□□□□ -1.49
SDC4P-201ENST00000453285 COL27A1Q8IZC6 1860 aaPredicted RBP5.75□□□□□ -1.49
SDC4P-201ENST00000453285 A0A1B0GTQ1 180 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 OR2A25A4D2G3 310 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 ASPDHA6ND91 283 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 LILRA5A6NI73 299 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 B4DGG1 531 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 C9JVG2 144 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 HAT1O14929 419 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 SH3BGRLO75368 114 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 SLC22A3O75751 556 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 CCNDBP1O95273 360 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 TGFB1P01137 390 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 ANXA6P08133 673 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 KRT16P08779 473 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 PRPS2P11908 318 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 HOXB3P14651 431 aaPredicted RBP5.75□□□□□ -1.49
SDC4P-201ENST00000453285 NQO1P15559 274 aaKnown RBP5.75□□□□□ -1.49
SDC4P-201ENST00000453285 GNSP15586 552 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 UGT2B7P16662 529 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 SDC1P18827 310 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 POLR2CP19387 275 aaPredicted RBP5.75□□□□□ -1.49
SDC4P-201ENST00000453285 ITGAXP20702 1163 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 CAPN3P20807 821 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 HRH2P25021 359 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 CXCR2P25025 360 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 TACR1P25103 407 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 PTX3P26022 381 aaPredicted RBP5.75□□□□□ -1.49
SDC4P-201ENST00000453285 CMPK1P30085 196 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 BCL6P41182 706 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 RASSF2P50749 326 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 NME5P56597 212 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 CLDN8P56748 225 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 STX1BP61266 288 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 PPP1CAP62136 330 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 SLC25A3Q00325 362 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 HHEXQ03014 270 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 HYAL2Q12891 473 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 CUL3Q13618 768 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 DDX39BQ13838 428 aaKnown RBP5.75□□□□□ -1.49
SDC4P-201ENST00000453285 PTGR1Q14914 329 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 PLCL1Q15111 1095 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 RBBP5Q15291 538 aaKnown RBP5.75□□□□□ -1.49
SDC4P-201ENST00000453285 RPS6KA2Q15349 733 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 TLR1Q15399 786 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 MAPRE2Q15555 327 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 SLC5A12Q1EHB4 618 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 DEFB133Q30KQ1 61 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 C14orf28Q4W4Y0 310 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 DEPDC1Q5TB30 811 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 FCRL6Q6DN72 434 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 NOXRED1Q6NXP6 359 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 C8orf82Q6P1X6 216 aaPredicted RBP5.75□□□□□ -1.49
SDC4P-201ENST00000453285 FBXO42Q6P3S6 717 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 GALNT18Q6P9A2 607 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 RIPOR1Q6ZS17 1223 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 UBE3DQ7Z6J8 389 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 TRIM73Q86UV7 250 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 RETREG3Q86VR2 466 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 ZNF761Q86XN6 746 aaPredicted RBP5.75□□□□□ -1.49
SDC4P-201ENST00000453285 SYT12Q8IV01 421 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 PLD3Q8IV08 490 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 RIMKLAQ8IXN7 391 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 PARP9Q8IXQ6 854 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.75□□□□□ -1.49
SDC4P-201ENST00000453285 METTL4Q8N3J2 472 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 LIX1Q8N485 282 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 C1orf52Q8N6N3 182 aaKnown RBP5.75□□□□□ -1.49
SDC4P-201ENST00000453285 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.75□□□□□ -1.49
SDC4P-201ENST00000453285 TSPEARQ8WU66 669 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 PIGKQ92643 395 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 SLC22A18Q96BI1 424 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 RCN3Q96D15 328 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 EGLN2Q96KS0 407 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 APOLD1Q96LR9 279 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 PPM1MQ96MI6 270 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 SERPINI1Q99574 410 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 ELF4Q99607 663 aaPredicted RBP5.75□□□□□ -1.49
SDC4P-201ENST00000453285 NPAS2Q99743 824 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 MS4A8Q9BY19 250 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 ZNF717Q9BY31 904 aaPredicted RBP5.75□□□□□ -1.49
SDC4P-201ENST00000453285 MRPL1Q9BYD6 325 aaKnown RBP5.75□□□□□ -1.49
SDC4P-201ENST00000453285 OR51B5Q9H339 312 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 CAPN10Q9HC96 672 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 FSCN3Q9NQT6 498 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 EVA1BQ9NVM1 165 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 MAP10Q9P2G4 905 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 SUSD2Q9UGT4 822 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 BAIAP2L1Q9UHR4 511 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 ADGRE2Q9UHX3 823 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 PILRAQ9UKJ1 303 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 SNX7Q9UNH6 387 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 DOLKQ9UPQ8 538 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 EIF3LQ9Y262 564 aaKnown RBP5.75□□□□□ -1.49
SDC4P-201ENST00000453285 RUVBL1Q9Y265 456 aaKnown RBP5.75□□□□□ -1.49
SDC4P-201ENST00000453285 KLHL20Q9Y2M5 609 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 TMED5Q9Y3A6 229 aa5.75□□□□□ -1.49
SDC4P-201ENST00000453285 KLK4Q9Y5K2 254 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms