RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 TRAF1Q13077 416 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 DNASE1L3Q13609 305 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 GK2Q14410 553 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 PNLIPRP3Q17RR3 467 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 BMT2Q1RMZ1 405 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 POM121L1PQ3SYA9 428 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 ZNF568Q3ZCX4 644 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 SPATS1Q496A3 300 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 BEX5Q5H9J7 111 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 MLIPQ5VWP3 458 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 ZSCAN25Q6NSZ9 544 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 LRRC8BQ6P9F7 803 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 FBXO46Q6PJ61 603 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 PRSS55Q6UWB4 352 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 Q6ZUG5 572 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 STXBP4Q6ZWJ1 553 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 TRPM8Q7Z2W7 1104 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 GDF7Q7Z4P5 450 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 ADGRF3Q8IZF5 1079 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 LRRC75A-AS1Q8N1F1 130 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 FAM47BQ8NA70 645 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 MCPH1Q8NEM0 835 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 KCNG3Q8TAE7 436 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 BBS10Q8TAM1 723 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 NDNFQ8TB73 568 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 ATG4AQ8WYN0 398 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 PIGBQ92521 554 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 CELF1Q92879 486 aaKnown RBP4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 LPPQ93052 612 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 MARS2Q96GW9 593 aaKnown RBP4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 WDYHV1Q96HA8 205 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 ZNF479Q96JC4 524 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 ELMO2Q96JJ3 720 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 EGLN2Q96KS0 407 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 TSNARE1Q96NA8 513 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 SFXN2Q96NB2 322 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 RAB40CQ96S21 281 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 MYADMQ96S97 322 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 C17orf62Q9BQA9 187 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 CHRDL1Q9BU40 450 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 MSTO1Q9BUK6 570 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 CINPQ9BW66 212 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 IFT27Q9BW83 186 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 FSD1LQ9BXM9 530 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 NDEL1Q9GZM8 345 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 HDHD2Q9H0R4 259 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 FBXO44Q9H4M3 255 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 UCK1Q9HA47 277 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 ZNF160Q9HCG1 818 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 MAN2C1Q9NTJ4 1040 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 SMARCAL1Q9NZC9 954 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 HACD3Q9P035 362 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 UXTQ9UBK9 157 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 PCDHA12Q9UN75 941 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 B3GNT3Q9Y2A9 372 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 OR10H1Q9Y4A9 318 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 CLIC4Q9Y696 253 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 DISP3Q9P2K9 1392 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 CFAP65Q6ZU64 1925 aaKnown RBP4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 ZNF541Q9H0D2 1346 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 A0A087X0K7 114 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 TRAV25A0A0B4J276 109 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 TMEM129A0AVI4 362 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 TYW5A2RUC4 315 aaKnown RBP4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 TMEM89A2RUT3 159 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 TMEM247A6NEH6 219 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 TMEM191CA6NGB0 347 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 ASB14A6NK59 587 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 MCIDASD6RGH6 385 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 SLC22A2O15244 555 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 TLX3O43711 291 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 PIGNO95427 931 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 CALCAP01258 141 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 KRT6AP02538 564 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 TMEM191BP0C7N4 346 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 DANCRP0C864 163 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 CREB1P16220 341 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 ITGB6P18564 788 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 SHMT1P34896 483 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 OR1D2P34982 312 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 RORAP35398 523 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 HSD17B3P37058 310 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 CSNK1EP49674 416 aaKnown RBP4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 JAK3P52333 1124 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 DSTNP60981 165 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 RAE1P78406 368 aaKnown RBP4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 DLK1P80370 383 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 MYBPC1Q00872 1141 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 SREBF2Q12772 1141 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 NAE1Q13564 534 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 SELPLGQ14242 412 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 HERC3Q15034 1050 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 TATDN3Q17R31 274 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 DCAF6Q58WW2 860 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 ARL13AQ5H913 290 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 ZNF618Q5T7W0 954 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 TSTD2Q5T7W7 516 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 IL23RQ5VWK5 629 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms