RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 PWWP2AQ96N64 755 aa12.23□□□□□ -0.45
CHD3-206ENST00000452447 PSMG3-AS1Q96PY0 264 aa12.23□□□□□ -0.45
CHD3-206ENST00000452447 MESP1Q9BRJ9 268 aa12.23□□□□□ -0.45
CHD3-206ENST00000452447 TRIM51Q9BSJ1 452 aa12.23□□□□□ -0.45
CHD3-206ENST00000452447 HAUS8Q9BT25 410 aa12.23□□□□□ -0.45
CHD3-206ENST00000452447 TRIM31Q9BZY9 425 aa12.23□□□□□ -0.45
CHD3-206ENST00000452447 AGPAT4Q9NRZ5 378 aa12.23□□□□□ -0.45
CHD3-206ENST00000452447 ZFATQ9P243 1243 aa12.23□□□□□ -0.45
CHD3-206ENST00000452447 MKL2Q9ULH7 1088 aa12.23□□□□□ -0.45
CHD3-206ENST00000452447 VWA7Q9Y334 891 aa12.23□□□□□ -0.45
CHD3-206ENST00000452447 PCDHGA10Q9Y5H3 936 aa12.23□□□□□ -0.45
CHD3-206ENST00000452447 TEX264Q9Y6I9 313 aa12.23□□□□□ -0.45
CHD3-206ENST00000452447 SEC31AO94979 1220 aaKnown RBP12.22□□□□□ -0.45
CHD3-206ENST00000452447 NSA2O95478 260 aaKnown RBP12.22□□□□□ -0.45
CHD3-206ENST00000452447 COX6A1P12074 109 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 GP1BBP13224 206 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 AP1S2P56377 157 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 CSNK1G2P78368 415 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 MAT1AQ00266 395 aaKnown RBP12.22□□□□□ -0.45
CHD3-206ENST00000452447 EEF1A2Q05639 463 aaKnown RBP12.22□□□□□ -0.45
CHD3-206ENST00000452447 ELOAQ14241 798 aaKnown RBP12.22□□□□□ -0.45
CHD3-206ENST00000452447 TLR1Q15399 786 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 NR6A1Q15406 480 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 SYT16Q17RD7 645 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 MFSD4BQ5TF39 518 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 TRMT10BQ6PF06 316 aaKnown RBP12.22□□□□□ -0.45
CHD3-206ENST00000452447 LCTLQ6UWM7 567 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 VN1R4Q7Z5H5 301 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 ARHGEF39Q8N4T4 335 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 OR9A4Q8NGU2 314 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 METTL21AQ8WXB1 218 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 ATL1Q8WXF7 558 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 LMF1Q96S06 567 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 SGPP1Q9BX95 441 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 FAM129AQ9BZQ8 928 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 PLAC1Q9HBJ0 212 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 RNF14Q9UBS8 474 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 NOVA2Q9UNW9 492 aaKnown RBP12.22□□□□□ -0.45
CHD3-206ENST00000452447 CSAG2Q9Y5P2 127 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 NOTCH2Q04721 2471 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 IGHV1-45A0A0A0MS14 117 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 FEZF1A0PJY2 475 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 CYSRT1A8MQ03 144 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 EFCAB8A8MWE9 144 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 NDC80O14777 642 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 BMP10O95393 424 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 GUCA1CO95843 209 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 TSPAN12O95859 305 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 SLC35G6P0C7Q6 338 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 PRR35P0CG20 571 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 CDH1P12830 882 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 NPPBP16860 134 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 SAT1P21673 171 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 FDXRP22570 491 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 AP2B1P63010 937 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 CDC16Q13042 620 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 PDIA2Q13087 525 aaKnown RBP12.22□□□□□ -0.45
CHD3-206ENST00000452447 MFAP5Q13361 173 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 ZNF169Q14929 603 aaPredicted RBP12.22□□□□□ -0.45
CHD3-206ENST00000452447 CRB2Q5IJ48 1285 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 DUPD1Q68J44 220 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 ASPGQ86U10 573 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 ANKMY2Q8IV38 441 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 ZC3H7AQ8IWR0 971 aaKnown RBP12.22□□□□□ -0.45
CHD3-206ENST00000452447 SSC4DQ8WTU2 575 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 SLC13A3Q8WWT9 602 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 PYCR2Q96C36 320 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 MACROD1Q9BQ69 325 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 ANKHQ9HCJ1 492 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 RIC8BQ9NVN3 520 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 PTGFRNQ9P2B2 879 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 SH2B3Q9UQQ2 575 aa12.22□□□□□ -0.45
CHD3-206ENST00000452447 MRPS2Q9Y399 296 aaKnown RBP12.22□□□□□ -0.45
CHD3-206ENST00000452447 DOPEY1Q5JWR5 2465 aa12.21□□□□□ -0.45
CHD3-206ENST00000452447 DYTNA2CJ06 578 aa12.21□□□□□ -0.46
CHD3-206ENST00000452447 ANKUB1A6NFN9 424 aa12.21□□□□□ -0.46
CHD3-206ENST00000452447 SEMA7AO75326 666 aa12.21□□□□□ -0.46
CHD3-206ENST00000452447 WFS1O76024 890 aa12.21□□□□□ -0.46
CHD3-206ENST00000452447 KLHL18O94889 574 aa12.21□□□□□ -0.46
CHD3-206ENST00000452447 CBX6O95503 412 aa12.21□□□□□ -0.46
CHD3-206ENST00000452447 SERPINA7P05543 415 aa12.21□□□□□ -0.46
CHD3-206ENST00000452447 ENO2P09104 434 aaPredicted RBP12.21□□□□□ -0.46
CHD3-206ENST00000452447 C8orf89P0DMQ9 161 aa12.21□□□□□ -0.46
CHD3-206ENST00000452447 ICAM2P13598 275 aa12.21□□□□□ -0.46
CHD3-206ENST00000452447 IL1RNP18510 177 aa12.21□□□□□ -0.46
CHD3-206ENST00000452447 CCR8P51685 355 aa12.21□□□□□ -0.46
CHD3-206ENST00000452447 PGGT1BP53609 377 aa12.21□□□□□ -0.46
CHD3-206ENST00000452447 ARG2P78540 354 aa12.21□□□□□ -0.46
CHD3-206ENST00000452447 MGAT5Q09328 741 aa12.21□□□□□ -0.46
CHD3-206ENST00000452447 MINDY4Q4G0A6 757 aa12.21□□□□□ -0.46
CHD3-206ENST00000452447 B3GNTL1Q67FW5 361 aaPredicted RBP12.21□□□□□ -0.46
CHD3-206ENST00000452447 STEAP4Q687X5 459 aa12.21□□□□□ -0.46
CHD3-206ENST00000452447 TMEM214Q6NUQ4 689 aaKnown RBP12.21□□□□□ -0.46
CHD3-206ENST00000452447 STRA8Q7Z7C7 330 aa12.21□□□□□ -0.46
CHD3-206ENST00000452447 TBC1D19Q8N5T2 526 aa12.21□□□□□ -0.46
CHD3-206ENST00000452447 FBXO36Q8NEA4 188 aa12.21□□□□□ -0.46
CHD3-206ENST00000452447 OR51Q1Q8NH59 317 aa12.21□□□□□ -0.46
CHD3-206ENST00000452447 ZCCHC10Q8TBK6 192 aa12.21□□□□□ -0.46
CHD3-206ENST00000452447 BRIX1Q8TDN6 353 aaKnown RBP12.21□□□□□ -0.46
CHD3-206ENST00000452447 KRT12Q99456 494 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms