RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 RFPL1O75677 317 aa19.02■□□□□ 0.64
COL9A3-202ENST00000452372 STK16O75716 305 aa19.02■□□□□ 0.64
COL9A3-202ENST00000452372 WDR47O94967 919 aa19.02■□□□□ 0.64
COL9A3-202ENST00000452372 ONECUT2O95948 504 aa19.02■□□□□ 0.64
COL9A3-202ENST00000452372 RECKO95980 971 aa19.02■□□□□ 0.64
COL9A3-202ENST00000452372 PTPN4P29074 926 aa19.02■□□□□ 0.64
COL9A3-202ENST00000452372 GLRBP48167 497 aa19.02■□□□□ 0.64
COL9A3-202ENST00000452372 MC1RQ01726 317 aa19.02■□□□□ 0.64
COL9A3-202ENST00000452372 CATSPEREQ5SY80 951 aa19.02■□□□□ 0.64
COL9A3-202ENST00000452372 STARD8Q92502 1023 aa19.02■□□□□ 0.64
COL9A3-202ENST00000452372 EXT2Q93063 718 aa19.02■□□□□ 0.64
COL9A3-202ENST00000452372 TSNARE1Q96NA8 513 aa19.02■□□□□ 0.64
COL9A3-202ENST00000452372 C17orf62Q9BQA9 187 aa19.02■□□□□ 0.64
COL9A3-202ENST00000452372 CAPS2Q9BXY5 557 aa19.02■□□□□ 0.64
COL9A3-202ENST00000452372 PELI2Q9HAT8 420 aa19.02■□□□□ 0.64
COL9A3-202ENST00000452372 PSMC3IPQ9P2W1 217 aaPredicted RBP19.02■□□□□ 0.64
COL9A3-202ENST00000452372 NDOR1Q9UHB4 597 aa19.02■□□□□ 0.64
COL9A3-202ENST00000452372 FEZF1A0PJY2 475 aa19.01■□□□□ 0.63
COL9A3-202ENST00000452372 SUPT3HB4E1H0 165 aa19.01■□□□□ 0.63
COL9A3-202ENST00000452372 UBXN8O00124 270 aa19.01■□□□□ 0.63
COL9A3-202ENST00000452372 MAP2K7O14733 419 aa19.01■□□□□ 0.63
COL9A3-202ENST00000452372 LCMT2O60294 686 aaKnown RBP19.01■□□□□ 0.63
COL9A3-202ENST00000452372 SUPT3HO75486 399 aa19.01■□□□□ 0.63
COL9A3-202ENST00000452372 SHBGP04278 402 aa19.01■□□□□ 0.63
COL9A3-202ENST00000452372 SFTPCP11686 197 aa19.01■□□□□ 0.63
COL9A3-202ENST00000452372 MTHFD2P13995 350 aa19.01■□□□□ 0.63
COL9A3-202ENST00000452372 GNAZP19086 355 aa19.01■□□□□ 0.63
COL9A3-202ENST00000452372 HSPA7P48741 367 aa19.01■□□□□ 0.63
COL9A3-202ENST00000452372 MUM1Q2TAK8 710 aa19.01■□□□□ 0.63
COL9A3-202ENST00000452372 HKDC1Q2TB90 917 aa19.01■□□□□ 0.63
COL9A3-202ENST00000452372 NKAIN1Q4KMZ8 207 aa19.01■□□□□ 0.63
COL9A3-202ENST00000452372 FBXO48Q5FWF7 155 aa19.01■□□□□ 0.63
COL9A3-202ENST00000452372 GARNL3Q5VVW2 1013 aa19.01■□□□□ 0.63
COL9A3-202ENST00000452372 EMBQ6PCB8 327 aa19.01■□□□□ 0.63
COL9A3-202ENST00000452372 NXPE4Q6UWF7 544 aa19.01■□□□□ 0.63
COL9A3-202ENST00000452372 FAM198BQ6UWH4 519 aa19.01■□□□□ 0.63
COL9A3-202ENST00000452372 VN1R4Q7Z5H5 301 aa19.01■□□□□ 0.63
COL9A3-202ENST00000452372 AENQ8WTP8 325 aaKnown RBP19.01■□□□□ 0.63
COL9A3-202ENST00000452372 ESAMQ96AP7 390 aa19.01■□□□□ 0.63
COL9A3-202ENST00000452372 TM4SF19Q96DZ7 209 aa19.01■□□□□ 0.63
COL9A3-202ENST00000452372 CABS1Q96KC9 395 aa19.01■□□□□ 0.63
COL9A3-202ENST00000452372 RUFY1Q96T51 708 aa19.01■□□□□ 0.63
COL9A3-202ENST00000452372 CD244Q9BZW8 370 aa19.01■□□□□ 0.63
COL9A3-202ENST00000452372 ACTL8Q9H568 366 aa19.01■□□□□ 0.63
COL9A3-202ENST00000452372 PPCSQ9HAB8 311 aa19.01■□□□□ 0.63
COL9A3-202ENST00000452372 DNAJC11Q9NVH1 559 aa19.01■□□□□ 0.63
COL9A3-202ENST00000452372 ZNF358Q9NW07 568 aa19.01■□□□□ 0.63
COL9A3-202ENST00000452372 GPRC5BQ9NZH0 403 aa19.01■□□□□ 0.63
COL9A3-202ENST00000452372 RUVBL1Q9Y265 456 aaKnown RBP19.01■□□□□ 0.63
COL9A3-202ENST00000452372 CCDC88CQ9P219 2028 aa19■□□□□ 0.63
COL9A3-202ENST00000452372 TRBC2A0A5B9 178 aa19■□□□□ 0.63
COL9A3-202ENST00000452372 C9J4A7 227 aa19■□□□□ 0.63
COL9A3-202ENST00000452372 CREG1O75629 220 aa19■□□□□ 0.63
COL9A3-202ENST00000452372 WISP1O95388 367 aa19■□□□□ 0.63
COL9A3-202ENST00000452372 MED26O95402 600 aa19■□□□□ 0.63
COL9A3-202ENST00000452372 RBP1P09455 135 aa19■□□□□ 0.63
COL9A3-202ENST00000452372 ITGAXP20702 1163 aa19■□□□□ 0.63
COL9A3-202ENST00000452372 HSD17B3P37058 310 aa19■□□□□ 0.63
COL9A3-202ENST00000452372 BCL6P41182 706 aa19■□□□□ 0.63
COL9A3-202ENST00000452372 MEF2AQ02078 507 aaPredicted RBP19■□□□□ 0.63
COL9A3-202ENST00000452372 CDC16Q13042 620 aa19■□□□□ 0.63
COL9A3-202ENST00000452372 NCF4Q15080 339 aa19■□□□□ 0.63
COL9A3-202ENST00000452372 TSNAXIP1Q2TAA8 658 aa19■□□□□ 0.63
COL9A3-202ENST00000452372 BORAQ6PGQ7 559 aa19■□□□□ 0.63
COL9A3-202ENST00000452372 PRICKLE2Q7Z3G6 844 aa19■□□□□ 0.63
COL9A3-202ENST00000452372 ENDOVQ8N8Q3 282 aaKnown RBP19■□□□□ 0.63
COL9A3-202ENST00000452372 MFSD9Q8NBP5 474 aa19■□□□□ 0.63
COL9A3-202ENST00000452372 C10orf90Q96M02 699 aa19■□□□□ 0.63
COL9A3-202ENST00000452372 PARD6BQ9BYG5 372 aa19■□□□□ 0.63
COL9A3-202ENST00000452372 SLC25A18Q9H1K4 315 aa19■□□□□ 0.63
COL9A3-202ENST00000452372 IFT80Q9P2H3 777 aaPredicted RBP19■□□□□ 0.63
COL9A3-202ENST00000452372 P2RX6O15547 441 aa18.99■□□□□ 0.63
COL9A3-202ENST00000452372 OR1F1O43749 312 aa18.99■□□□□ 0.63
COL9A3-202ENST00000452372 KLK8O60259 260 aa18.99■□□□□ 0.63
COL9A3-202ENST00000452372 CD63P08962 238 aa18.99■□□□□ 0.63
COL9A3-202ENST00000452372 PIM1P11309 404 aaPredicted RBP18.99■□□□□ 0.63
COL9A3-202ENST00000452372 TECRLQ5HYJ1 363 aa18.99■□□□□ 0.63
COL9A3-202ENST00000452372 MLIPQ5VWP3 458 aa18.99■□□□□ 0.63
COL9A3-202ENST00000452372 PRMT9Q6P2P2 845 aa18.99■□□□□ 0.63
COL9A3-202ENST00000452372 SLCO4C1Q6ZQN7 724 aa18.99■□□□□ 0.63
COL9A3-202ENST00000452372 TMPRSS11BQ86T26 416 aa18.99■□□□□ 0.63
COL9A3-202ENST00000452372 TDRPQ86YL5 185 aa18.99■□□□□ 0.63
COL9A3-202ENST00000452372 ARHGEF39Q8N4T4 335 aa18.99■□□□□ 0.63
COL9A3-202ENST00000452372 TBC1D19Q8N5T2 526 aa18.99■□□□□ 0.63
COL9A3-202ENST00000452372 CAMKVQ8NCB2 501 aa18.99■□□□□ 0.63
COL9A3-202ENST00000452372 ZNF740Q8NDX6 193 aa18.99■□□□□ 0.63
COL9A3-202ENST00000452372 MZB1Q8WU39 189 aa18.99■□□□□ 0.63
COL9A3-202ENST00000452372 UBTD2Q8WUN7 234 aa18.99■□□□□ 0.63
COL9A3-202ENST00000452372 AIF1LQ9BQI0 150 aa18.99■□□□□ 0.63
COL9A3-202ENST00000452372 ADNPQ9H2P0 1102 aa18.99■□□□□ 0.63
COL9A3-202ENST00000452372 SPNS1Q9H2V7 528 aa18.99■□□□□ 0.63
COL9A3-202ENST00000452372 SLC22A11Q9NSA0 550 aa18.99■□□□□ 0.63
COL9A3-202ENST00000452372 TBK1Q9UHD2 729 aa18.99■□□□□ 0.63
COL9A3-202ENST00000452372 GPN3Q9UHW5 284 aaPredicted RBP18.99■□□□□ 0.63
COL9A3-202ENST00000452372 C1GALT1C1LP0DN25 315 aa18.98■□□□□ 0.63
COL9A3-202ENST00000452372 CXCR2P25025 360 aa18.98■□□□□ 0.63
COL9A3-202ENST00000452372 SCTRP47872 440 aa18.98■□□□□ 0.63
COL9A3-202ENST00000452372 RPS18P62269 152 aaKnown RBP18.98■□□□□ 0.63
COL9A3-202ENST00000452372 REEP5Q00765 189 aa18.98■□□□□ 0.63
COL9A3-202ENST00000452372 KCNC4Q03721 635 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms