RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 THOC3Q96J01 351 aaKnown RBP11.83□□□□□ -0.52
CPSF4-208ENST00000452047 OR4K3Q96R72 315 aa11.83□□□□□ -0.52
CPSF4-208ENST00000452047 SLC29A3Q9BZD2 475 aa11.83□□□□□ -0.52
CPSF4-208ENST00000452047 TRIM31Q9BZY9 425 aa11.83□□□□□ -0.52
CPSF4-208ENST00000452047 ASF1BQ9NVP2 202 aa11.83□□□□□ -0.52
CPSF4-208ENST00000452047 IKZF3Q9UKT9 509 aa11.83□□□□□ -0.52
CPSF4-208ENST00000452047 NOVA2Q9UNW9 492 aaKnown RBP11.83□□□□□ -0.52
CPSF4-208ENST00000452047 NTNG1Q9Y2I2 539 aa11.83□□□□□ -0.52
CPSF4-208ENST00000452047 VWA7Q9Y334 891 aa11.83□□□□□ -0.52
CPSF4-208ENST00000452047 ICE1Q9Y2F5 2266 aa11.83□□□□□ -0.52
CPSF4-208ENST00000452047 SCN3AQ9NY46 2000 aa11.82□□□□□ -0.52
CPSF4-208ENST00000452047 DOPEY1Q5JWR5 2465 aa11.82□□□□□ -0.52
CPSF4-208ENST00000452047 LOC102723996A0A087X1L8 192 aa11.82□□□□□ -0.52
CPSF4-208ENST00000452047 IGHV1-45A0A0A0MS14 117 aa11.82□□□□□ -0.52
CPSF4-208ENST00000452047 NSG1A0A0A6YYJ2 146 aa11.82□□□□□ -0.52
CPSF4-208ENST00000452047 FEZF1A0PJY2 475 aa11.82□□□□□ -0.52
CPSF4-208ENST00000452047 H0YIG0 161 aa11.82□□□□□ -0.52
CPSF4-208ENST00000452047 PCDH17O14917 1159 aa11.82□□□□□ -0.52
CPSF4-208ENST00000452047 LCMT2O60294 686 aaKnown RBP11.82□□□□□ -0.52
CPSF4-208ENST00000452047 KLHL18O94889 574 aa11.82□□□□□ -0.52
CPSF4-208ENST00000452047 BMP10O95393 424 aa11.82□□□□□ -0.52
CPSF4-208ENST00000452047 HIST1H2AGP0C0S8 130 aaPredicted RBP11.82□□□□□ -0.52
CPSF4-208ENST00000452047 CDH1P12830 882 aa11.82□□□□□ -0.52
CPSF4-208ENST00000452047 ZNF37AP17032 561 aaPredicted RBP11.82□□□□□ -0.52
CPSF4-208ENST00000452047 HIST1H2ADP20671 130 aa11.82□□□□□ -0.52
CPSF4-208ENST00000452047 RPL21P46778 160 aaKnown RBP11.82□□□□□ -0.52
CPSF4-208ENST00000452047 EEF1A2Q05639 463 aaKnown RBP11.82□□□□□ -0.52
CPSF4-208ENST00000452047 PPP1R3AQ16821 1122 aa11.82□□□□□ -0.52
CPSF4-208ENST00000452047 FHL5Q5TD97 284 aa11.82□□□□□ -0.52
CPSF4-208ENST00000452047 IRAK1BP1Q5VVH5 260 aa11.82□□□□□ -0.52
CPSF4-208ENST00000452047 DUPD1Q68J44 220 aa11.82□□□□□ -0.52
CPSF4-208ENST00000452047 CAPN13Q6MZZ7 669 aaPredicted RBP11.82□□□□□ -0.52
CPSF4-208ENST00000452047 TMEM205Q6UW68 189 aa11.82□□□□□ -0.52
CPSF4-208ENST00000452047 SBSNQ6UWP8 590 aa11.82□□□□□ -0.52
CPSF4-208ENST00000452047 TMEM207Q6UWW9 146 aa11.82□□□□□ -0.52
CPSF4-208ENST00000452047 NDUFAF7Q7L592 441 aa11.82□□□□□ -0.52
CPSF4-208ENST00000452047 ZC3HC1Q86WB0 502 aaKnown RBP11.82□□□□□ -0.52
CPSF4-208ENST00000452047 ANKMY2Q8IV38 441 aa11.82□□□□□ -0.52
CPSF4-208ENST00000452047 SHISA5Q8N114 240 aa11.82□□□□□ -0.52
CPSF4-208ENST00000452047 FBXO36Q8NEA4 188 aa11.82□□□□□ -0.52
CPSF4-208ENST00000452047 ABHD11Q8NFV4 315 aa11.82□□□□□ -0.52
CPSF4-208ENST00000452047 PSMF1Q92530 271 aa11.82□□□□□ -0.52
CPSF4-208ENST00000452047 PYCR2Q96C36 320 aa11.82□□□□□ -0.52
CPSF4-208ENST00000452047 FBXL8Q96CD0 374 aa11.82□□□□□ -0.52
CPSF4-208ENST00000452047 PDLIM5Q96HC4 596 aaKnown RBP11.82□□□□□ -0.52
CPSF4-208ENST00000452047 HIST1H2AHQ96KK5 128 aa11.82□□□□□ -0.52
CPSF4-208ENST00000452047 HIST1H2AJQ99878 128 aa11.82□□□□□ -0.52
CPSF4-208ENST00000452047 MACROD1Q9BQ69 325 aa11.82□□□□□ -0.52
CPSF4-208ENST00000452047 MCMBPQ9BTE3 642 aa11.82□□□□□ -0.52
CPSF4-208ENST00000452047 H2AFJQ9BTM1 129 aa11.82□□□□□ -0.52
CPSF4-208ENST00000452047 SARGQ9BW04 601 aa11.82□□□□□ -0.52
CPSF4-208ENST00000452047 YIPF2Q9BWQ6 316 aa11.82□□□□□ -0.52
CPSF4-208ENST00000452047 ARL15Q9NXU5 204 aa11.82□□□□□ -0.52
CPSF4-208ENST00000452047 MOCS1Q9NZB8 636 aa11.82□□□□□ -0.52
CPSF4-208ENST00000452047 MAP10Q9P2G4 905 aa11.82□□□□□ -0.52
CPSF4-208ENST00000452047 RNF14Q9UBS8 474 aa11.82□□□□□ -0.52
CPSF4-208ENST00000452047 UNC79Q9P2D8 2635 aa11.81□□□□□ -0.52
CPSF4-208ENST00000452047 BLACEA4D250 179 aa11.81□□□□□ -0.52
CPSF4-208ENST00000452047 EFCAB8A8MWE9 144 aa11.81□□□□□ -0.52
CPSF4-208ENST00000452047 SEMA7AO75326 666 aa11.81□□□□□ -0.52
CPSF4-208ENST00000452047 JRKO75564 520 aa11.81□□□□□ -0.52
CPSF4-208ENST00000452047 AGFG2O95081 481 aa11.81□□□□□ -0.52
CPSF4-208ENST00000452047 CBX6O95503 412 aa11.81□□□□□ -0.52
CPSF4-208ENST00000452047 HEXBP07686 556 aa11.81□□□□□ -0.52
CPSF4-208ENST00000452047 ENO2P09104 434 aaPredicted RBP11.81□□□□□ -0.52
CPSF4-208ENST00000452047 PRR35P0CG20 571 aa11.81□□□□□ -0.52
CPSF4-208ENST00000452047 GP1BBP13224 206 aa11.81□□□□□ -0.52
CPSF4-208ENST00000452047 IL1RNP18510 177 aa11.81□□□□□ -0.52
CPSF4-208ENST00000452047 SOX11P35716 441 aa11.81□□□□□ -0.52
CPSF4-208ENST00000452047 PAFAH1B1P43034 410 aa11.81□□□□□ -0.52
CPSF4-208ENST00000452047 AVPR1BP47901 424 aa11.81□□□□□ -0.52
CPSF4-208ENST00000452047 MGAT5Q09328 741 aa11.81□□□□□ -0.52
CPSF4-208ENST00000452047 PDIA2Q13087 525 aaKnown RBP11.81□□□□□ -0.52
CPSF4-208ENST00000452047 MFAP5Q13361 173 aa11.81□□□□□ -0.52
CPSF4-208ENST00000452047 PCOLCEQ15113 449 aa11.81□□□□□ -0.52
CPSF4-208ENST00000452047 NR6A1Q15406 480 aa11.81□□□□□ -0.52
CPSF4-208ENST00000452047 EIF2S3LQ2VIR3 472 aaKnown RBP11.81□□□□□ -0.52
CPSF4-208ENST00000452047 FAAH2Q6GMR7 532 aa11.81□□□□□ -0.52
CPSF4-208ENST00000452047 ISLR2Q6UXK2 745 aa11.81□□□□□ -0.52
CPSF4-208ENST00000452047 SLC26A11Q86WA9 606 aa11.81□□□□□ -0.52
CPSF4-208ENST00000452047 PDSS2Q86YH6 399 aa11.81□□□□□ -0.52
CPSF4-208ENST00000452047 KBTBD2Q8IY47 623 aa11.81□□□□□ -0.52
CPSF4-208ENST00000452047 KCT2Q8NC54 265 aa11.81□□□□□ -0.52
CPSF4-208ENST00000452047 CAMKVQ8NCB2 501 aa11.81□□□□□ -0.52
CPSF4-208ENST00000452047 OR4K1Q8NGD4 311 aa11.81□□□□□ -0.52
CPSF4-208ENST00000452047 ALKBH8Q96BT7 664 aaKnown RBP11.81□□□□□ -0.52
CPSF4-208ENST00000452047 KRT12Q99456 494 aa11.81□□□□□ -0.52
CPSF4-208ENST00000452047 HAUS8Q9BT25 410 aa11.81□□□□□ -0.52
CPSF4-208ENST00000452047 FAM129AQ9BZQ8 928 aa11.81□□□□□ -0.52
CPSF4-208ENST00000452047 VN1R1Q9GZP7 353 aa11.81□□□□□ -0.52
CPSF4-208ENST00000452047 ZNF700Q9H0M5 742 aa11.81□□□□□ -0.52
CPSF4-208ENST00000452047 EPS8L2Q9H6S3 715 aa11.81□□□□□ -0.52
CPSF4-208ENST00000452047 RIC8BQ9NVN3 520 aa11.81□□□□□ -0.52
CPSF4-208ENST00000452047 ZFATQ9P243 1243 aa11.81□□□□□ -0.52
CPSF4-208ENST00000452047 MKL2Q9ULH7 1088 aa11.81□□□□□ -0.52
CPSF4-208ENST00000452047 COPG1Q9Y678 874 aaKnown RBP11.81□□□□□ -0.52
CPSF4-208ENST00000452047 CRYBG3Q68DQ2 2970 aa11.81□□□□□ -0.52
CPSF4-208ENST00000452047 SCN2AQ99250 2005 aa11.81□□□□□ -0.52
CPSF4-208ENST00000452047 POLEQ07864 2286 aa11.8□□□□□ -0.52
CPSF4-208ENST00000452047 GUCA1CO95843 209 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms