RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 SLC26A1Q9H2B4 701 aa8.25□□□□□ -1.09
RFX3-209ENST00000451859 ZNF552Q9H707 407 aaPredicted RBP8.25□□□□□ -1.09
RFX3-209ENST00000451859 ZNF160Q9HCG1 818 aa8.25□□□□□ -1.09
RFX3-209ENST00000451859 SEMA3GQ9NS98 782 aa8.25□□□□□ -1.09
RFX3-209ENST00000451859 KLHL42Q9P2K6 505 aa8.25□□□□□ -1.09
RFX3-209ENST00000451859 C3orf18Q9UK00 162 aa8.25□□□□□ -1.09
RFX3-209ENST00000451859 PDE10AQ9Y233 779 aa8.25□□□□□ -1.09
RFX3-209ENST00000451859 MRPS2Q9Y399 296 aaKnown RBP8.25□□□□□ -1.09
RFX3-209ENST00000451859 MAP4K5Q9Y4K4 846 aa8.25□□□□□ -1.09
RFX3-209ENST00000451859 CSAG2Q9Y5P2 127 aa8.25□□□□□ -1.09
RFX3-209ENST00000451859 SAR1BQ9Y6B6 198 aa8.25□□□□□ -1.09
RFX3-209ENST00000451859 FEZF1A0PJY2 475 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 BLACEA4D250 179 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 VSTM2BA6NLU5 285 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 EFCAB8A8MWE9 144 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 PRPF4O43172 522 aaKnown RBP eCLIP8.24□□□□□ -1.09
RFX3-209ENST00000451859 IPO13O94829 963 aaKnown RBP8.24□□□□□ -1.09
RFX3-209ENST00000451859 AGFG2O95081 481 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 GUCA1CO95843 209 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 C8GP07360 202 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 HEXBP07686 556 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 CDH1P12830 882 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 IL1RNP18510 177 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 PAFAH1B1P43034 410 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 GLRBP48167 497 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 EMP2P54851 167 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 ARL4CP56559 192 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 SNRPNP63162 240 aaKnown RBP8.24□□□□□ -1.09
RFX3-209ENST00000451859 ABATP80404 500 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 MEF2AQ02078 507 aaPredicted RBP8.24□□□□□ -1.09
RFX3-209ENST00000451859 PDIA2Q13087 525 aaKnown RBP8.24□□□□□ -1.09
RFX3-209ENST00000451859 ZNF460Q14592 562 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 FASTKD3Q14CZ7 662 aaKnown RBP8.24□□□□□ -1.09
RFX3-209ENST00000451859 TEDDM1Q5T9Z0 273 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 LRRC8EQ6NSJ5 796 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 HIBCHQ6NVY1 386 aaPredicted RBP8.24□□□□□ -1.09
RFX3-209ENST00000451859 LINC00696Q6ZRV3 163 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 SYDE1Q6ZW31 735 aaPredicted RBP8.24□□□□□ -1.09
RFX3-209ENST00000451859 PRSS41Q7RTY9 318 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 CNTN4Q8IWV2 1026 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 IQCKQ8N0W5 287 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 ZADH2Q8N4Q0 377 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 FAM26EQ8N5C1 309 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 CISD2Q8N5K1 135 aaKnown RBP8.24□□□□□ -1.09
RFX3-209ENST00000451859 AMER2Q8N7J2 671 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 AMER3Q8N944 861 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 FBXO15Q8NCQ5 510 aaPredicted RBP8.24□□□□□ -1.09
RFX3-209ENST00000451859 OR11G2Q8NGC1 345 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 OR9A4Q8NGU2 314 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 TM9SF4Q92544 642 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 PYCR2Q96C36 320 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 CCDC138Q96M89 665 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 RUNDC3BQ96NL0 473 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 OLFM1Q99784 485 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 SLC29A3Q9BZD2 475 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 DPH5Q9H2P9 285 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 PLAC1Q9HBJ0 212 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 ASF1BQ9NVP2 202 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 ARL15Q9NXU5 204 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 HCN3Q9P1Z3 774 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 ZFATQ9P243 1243 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 C5AR2Q9P296 337 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 CDC14AQ9UNH5 594 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 B3GNT3Q9Y2A9 372 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 SNX24Q9Y343 169 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 TEX264Q9Y6I9 313 aa8.24□□□□□ -1.09
RFX3-209ENST00000451859 USP9YO00507 2555 aaPredicted RBP8.24□□□□□ -1.09
RFX3-209ENST00000451859 MYO7BQ6PIF6 2116 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 EML6Q6ZMW3 1958 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 NSG1A0A0A6YYJ2 146 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 NPEPPSL1A6NEC2 478 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 ZNF860A6NHJ4 632 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 FIGNL2A6NMB9 653 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 IDSB3KWA1 339 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 TCP11X1B4DZS4 312 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 EIF3FO00303 357 aaPredicted RBP8.23□□□□□ -1.09
RFX3-209ENST00000451859 FOXS1O43638 330 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 JRKO75564 520 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 PIAS1O75925 651 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 SEC31AO94979 1220 aaKnown RBP8.23□□□□□ -1.09
RFX3-209ENST00000451859 ONECUT2O95948 504 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 SERPIND1P05546 499 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 CELA2AP08217 269 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 HIST1H2AGP0C0S8 130 aaPredicted RBP8.23□□□□□ -1.09
RFX3-209ENST00000451859 HIST1H2ADP20671 130 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 FDXRP22570 491 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 CXCR2P25025 360 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 BCL6P41182 706 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 RPL21P46778 160 aaKnown RBP8.23□□□□□ -1.09
RFX3-209ENST00000451859 AVPR1BP47901 424 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 IL2P60568 153 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 RPS15AP62244 130 aaKnown RBP8.23□□□□□ -1.09
RFX3-209ENST00000451859 C2orf54Q08AI8 447 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 Q0VFX4 171 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 SP140Q13342 867 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 NR6A1Q15406 480 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 NDUFA9Q16795 377 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 EIF2S3LQ2VIR3 472 aaKnown RBP8.23□□□□□ -1.09
RFX3-209ENST00000451859 AGAP7PQ5VUJ5 663 aa8.23□□□□□ -1.09
RFX3-209ENST00000451859 FAM45BPQ6NSW5 357 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms