RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 OR51B5Q9H339 312 aa9.9□□□□□ -0.82
SCN10A-201ENST00000449082 WDR6Q9NNW5 1121 aaKnown RBP9.9□□□□□ -0.82
SCN10A-201ENST00000449082 A0A1W2PP55 124 aa9.9□□□□□ -0.83
SCN10A-201ENST00000449082 ABLIM1O14639 778 aa9.9□□□□□ -0.83
SCN10A-201ENST00000449082 KHNYNO15037 678 aaKnown RBP9.9□□□□□ -0.83
SCN10A-201ENST00000449082 PAK4O96013 591 aaPredicted RBP9.9□□□□□ -0.83
SCN10A-201ENST00000449082 RPLP0P05388 317 aaKnown RBP9.9□□□□□ -0.83
SCN10A-201ENST00000449082 CREB1P16220 341 aa9.9□□□□□ -0.83
SCN10A-201ENST00000449082 EDNRBP24530 442 aa9.9□□□□□ -0.83
SCN10A-201ENST00000449082 HNF1BP35680 557 aa9.9□□□□□ -0.83
SCN10A-201ENST00000449082 SLC6A9P48067 706 aa9.9□□□□□ -0.83
SCN10A-201ENST00000449082 ST3GAL3Q11203 375 aa9.9□□□□□ -0.83
SCN10A-201ENST00000449082 PCBP2Q15366 365 aaKnown RBP eCLIP9.9□□□□□ -0.83
SCN10A-201ENST00000449082 PDCD4Q53EL6 469 aaKnown RBP9.9□□□□□ -0.83
SCN10A-201ENST00000449082 PAMR1Q6UXH9 720 aa9.9□□□□□ -0.83
SCN10A-201ENST00000449082 LGI4Q8N135 537 aa9.9□□□□□ -0.83
SCN10A-201ENST00000449082 PNLDC1Q8NA58 520 aaKnown RBP9.9□□□□□ -0.83
SCN10A-201ENST00000449082 NR4A3Q92570 626 aa9.9□□□□□ -0.83
SCN10A-201ENST00000449082 MR1Q95460 341 aa9.9□□□□□ -0.83
SCN10A-201ENST00000449082 NKD1Q969G9 470 aa9.9□□□□□ -0.83
SCN10A-201ENST00000449082 ZDHHC2Q9UIJ5 367 aa9.9□□□□□ -0.83
SCN10A-201ENST00000449082 RNF11Q9Y3C5 154 aa9.9□□□□□ -0.83
SCN10A-201ENST00000449082 SNX4O95219 450 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 GSTT2BP0CG30 244 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 ITGA3P26006 1051 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 CD47Q08722 323 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 E2F2Q14209 437 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 EIF4HQ15056 248 aaKnown RBP9.89□□□□□ -0.83
SCN10A-201ENST00000449082 C10orf62Q5T681 223 aaPredicted RBP9.89□□□□□ -0.83
SCN10A-201ENST00000449082 LDLRAD1Q5T700 205 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 SMYD5Q6GMV2 418 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 SUSD1Q6UWL2 747 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 C10orf82Q8WW14 230 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 NKX2-4Q9H2Z4 354 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 COQ10BQ9H8M1 238 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 CENPMQ9NSP4 180 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 PEX16Q9Y5Y5 336 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 DLG5Q8TDM6 1919 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 TFECO14948 347 aaPredicted RBP9.89□□□□□ -0.83
SCN10A-201ENST00000449082 MUSKO15146 869 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 MTHFD1P11586 935 aaKnown RBP9.89□□□□□ -0.83
SCN10A-201ENST00000449082 BMPR1AP36894 532 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 PITPNAQ00169 270 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 TGFBIQ15582 683 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 TIFABQ6ZNK6 161 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 TAS1R3Q7RTX0 852 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 ZNF676Q8N7Q3 588 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 NFKBIDQ8NI38 313 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 GLYATL1Q969I3 302 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 CNDP2Q96KP4 475 aaKnown RBP9.89□□□□□ -0.83
SCN10A-201ENST00000449082 SLC39A3Q9BRY0 314 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 MS4A12Q9NXJ0 267 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 RIMKLBQ9ULI2 386 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 POFUT2Q9Y2G5 429 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 GRIP1Q9Y3R0 1128 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 ZNF840PA6NDX5 716 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 AGPSO00116 658 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 SLC16A5O15375 505 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 ITGA10O75578 1167 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 CREB5Q02930 508 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 TMEM198Q66K66 360 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 NANOGNBQ7Z5D8 188 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 ZNF598Q86UK7 904 aaKnown RBP9.89□□□□□ -0.83
SCN10A-201ENST00000449082 GHDCQ8N2G8 530 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 OR5M3Q8NGP4 307 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 MOAP1Q96BY2 351 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 ZNF717Q9BY31 904 aaPredicted RBP9.89□□□□□ -0.83
SCN10A-201ENST00000449082 GPR34Q9UPC5 381 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 NPC1O15118 1278 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 CAPN5O15484 640 aaPredicted RBP9.89□□□□□ -0.83
SCN10A-201ENST00000449082 SHOX2O60902 331 aaPredicted RBP9.89□□□□□ -0.83
SCN10A-201ENST00000449082 KAT7O95251 611 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 PEX2P28328 305 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 FOXN2P32314 431 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 HOXD13P35453 343 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 ETV3P41162 512 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 SLC18A1P54219 525 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 MXD1Q05195 221 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 CLEC12AQ5QGZ9 265 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 NPAS3Q8IXF0 933 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 OR2L3Q8NG85 312 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 ADAD1Q96M93 576 aaKnown RBP9.89□□□□□ -0.83
SCN10A-201ENST00000449082 F7P08709 466 aaPredicted RBP9.89□□□□□ -0.83
SCN10A-201ENST00000449082 LINGO3P0C6S8 592 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 MPC1LP0DKB6 136 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 C8orf89P0DMQ9 161 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 BMP8BP34820 402 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 DGKQP52824 942 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 SWI5Q1ZZU3 235 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 ZNF630Q2M218 657 aaPredicted RBP9.89□□□□□ -0.83
SCN10A-201ENST00000449082 TNFAIP8L3Q5GJ75 292 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 COLEC12Q5KU26 742 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 KIAA1161Q6NSJ0 714 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 BMP8AQ7Z5Y6 402 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 PIGWQ7Z7B1 504 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 TRIM74Q86UV6 250 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 C7orf57Q8NEG2 295 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 TBX5Q99593 518 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 GPR174Q9BXC1 333 aa9.89□□□□□ -0.83
SCN10A-201ENST00000449082 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms