RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 AP2A2O94973 939 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 RRASP10301 218 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 APEX1P27695 318 aaKnown RBP9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 GBX2P52951 348 aaPredicted RBP9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 HNRNPA0Q13151 305 aaKnown RBP9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 CDH18Q13634 790 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 SEMA3AQ14563 771 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 CLLU1Q5K131 121 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 LIX1Q8N485 282 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 LRRC17Q8N6Y2 441 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 DENND6BQ8NEG7 585 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 OR7D4Q8NG98 312 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 GIMAP5Q96F15 307 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 TPD52L3Q96J77 140 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 HSH2DQ96JZ2 352 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 FEVQ99581 238 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 C1QTNF3Q9BXJ4 246 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 IFT22Q9H7X7 185 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 ARNT2Q9HBZ2 717 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 HHATLQ9HCP6 504 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 IFT46Q9NQC8 304 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 ZMYM5Q9UJ78 669 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 SSR3Q9UNL2 185 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 LOC102723532A0A0G2JNH3 316 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 LCHNA4D1U4 455 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 ZNF670-ZNF695F2Z2N8 137 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 HAS3O00219 553 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 E2F3O00716 465 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 WNT9AO14904 365 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 NUPL2O15504 423 aaKnown RBP9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 TPOP07202 933 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 PROS1P07225 676 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 NPR3P17342 541 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 CD86P42081 329 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 BAG6P46379 1132 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 TPMTP51580 245 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 MAXP61244 160 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 CCDC85BQ15834 202 aaPredicted RBP9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 FAM182BQ5T319 152 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 DOK6Q6PKX4 331 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 GDPGP1Q6ZNW5 385 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 GPSM1Q86YR5 675 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 ARHGAP12Q8IWW6 846 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 ZBED6CLQ96FA7 236 aaPredicted RBP9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 TNIP3Q96KP6 325 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 OPALINQ96PE5 141 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 CDCA4Q9BXL8 241 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 RERGLQ9H628 205 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 CCSER2Q9H7U1 834 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 SEC14L4Q9UDX3 406 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 UBQLN2Q9UHD9 624 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 SSC5DA1L4H1 1573 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 A0A0G2JMZ2 1700 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 LRRC37A2A6NM11 1700 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 TRBV5-3A0A0A0MS03 114 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 OR1I1O60431 355 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 ITGA1P56199 1179 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 EXOSC2Q13868 293 aaKnown RBP9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 COL28A1Q2UY09 1125 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 CYP27C1Q4G0S4 372 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 GPR139Q6DWJ6 353 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 CTU1Q7Z7A3 348 aaKnown RBP9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 ABI3BPQ7Z7G0 1075 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 Q8N402 240 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 CREB3L4Q8TEY5 395 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 ZC3HAV1LQ96H79 300 aaKnown RBP9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 ZSWIM3Q96MP5 696 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 MARVELD1Q9BSK0 173 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 TAPBPLQ9BX59 468 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 RANBP3Q9H6Z4 567 aaPredicted RBP9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 MRPL39Q9NYK5 338 aaKnown RBP9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 MALT1Q9UDY8 824 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 ZNF222Q9UK12 451 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 ZNF175Q9Y473 711 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 RPS10-NUDT3A0A1W2PQS6 291 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 HCN1O60741 890 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 ALDH1A1P00352 501 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 CLCN7P51798 805 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 FAM187BQ17R55 369 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 OVOS1Q6IE37 1185 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 PDE12Q6L8Q7 609 aaKnown RBP9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 ARMCX2Q7L311 632 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 OR4F6Q8NGB9 312 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 OR6C4Q8NGE1 309 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 ST8SIA2Q92186 375 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 SGTBQ96EQ0 304 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 MED28Q9H204 178 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 NT5MQ9NPB1 228 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 ZNF112Q9UJU3 913 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 GMEB2Q9UKD1 530 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 CFAP20Q9Y6A4 193 aaKnown RBP9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 COMMD10Q9Y6G5 202 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 ACSL4O60488 711 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 SCG5P05408 212 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 CKMT1AP12532 417 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 KDELR2P33947 212 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 PIK3CGP48736 1102 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 ABATP80404 500 aa9.11□□□□□ -0.95
SYNPO2-204ENST00000448416 PLPP6Q8IY26 295 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms