RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 RAB39AQ14964 217 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 PON3Q15166 354 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 GPR68Q15743 365 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 CHRNA6Q15825 494 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 ATP6AP1Q15904 470 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 ADGRF1Q5T601 910 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 RBM23Q86U06 439 aaKnown RBP7.56□□□□□ -1.2
NEDD9-204ENST00000448183 NPAS4Q8IUM7 802 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 DRAXINQ8NBI3 349 aaPredicted RBP7.56□□□□□ -1.2
NEDD9-204ENST00000448183 TMEM145Q8NBT3 493 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 OR10Q1Q8NGQ4 319 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 SLC35F5Q8WV83 523 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 PMM1Q92871 262 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 RIT1Q92963 219 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 PMEPA1Q969W9 287 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 TRIM43Q96BQ3 446 aaPredicted RBP7.56□□□□□ -1.2
NEDD9-204ENST00000448183 HIST1H2AAQ96QV6 131 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 TRMT61BQ9BVS5 477 aaKnown RBP7.56□□□□□ -1.2
NEDD9-204ENST00000448183 CCDC106Q9BWC9 280 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 TSSK6Q9BXA6 273 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 ABCB8Q9NUT2 735 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 TAS2R10Q9NYW0 307 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 FBXO9Q9UK97 447 aaPredicted RBP7.56□□□□□ -1.2
NEDD9-204ENST00000448183 SLIT3O75094 1523 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 C2orf92A0A1B0GVN3 265 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 BHMG1C9JSJ3 638 aaPredicted RBP7.56□□□□□ -1.2
NEDD9-204ENST00000448183 CSF2P04141 144 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 VAMP1P23763 118 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 LCN1P31025 176 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 SEMG2Q02383 582 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 DSG2Q14126 1118 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 MPP2Q14168 576 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 TCEAL1Q15170 157 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 GRK1Q15835 563 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 SCGB2B2Q4G0G5 96 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 GXYLT1Q4G148 440 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 CYBRD1Q53TN4 286 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 ZNF678Q5SXM1 525 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 C6orf141Q5SZD1 244 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 RGMBQ6NW40 437 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 CILP2Q8IUL8 1156 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 CCDC28AQ8IWP9 274 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 ASCC1Q8N9N2 400 aaKnown RBP7.56□□□□□ -1.2
NEDD9-204ENST00000448183 PNLDC1Q8NA58 520 aaKnown RBP7.56□□□□□ -1.2
NEDD9-204ENST00000448183 OR2L8Q8NGY9 312 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 PLEKHO2Q8TD55 490 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 SLC22A18Q96BI1 424 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 PSKH2Q96QS6 385 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 BCO2Q9BYV7 579 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 DPEP2Q9H4A9 486 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 METTL8Q9H825 291 aaKnown RBP7.56□□□□□ -1.2
NEDD9-204ENST00000448183 MAB21L2Q9Y586 359 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 PSAT1Q9Y617 370 aa7.56□□□□□ -1.2
NEDD9-204ENST00000448183 J3QLW9 94 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 CAPN15O75808 1086 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 ZNF19P17023 458 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 SMPD1P17405 629 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 IGFBP4P22692 258 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 GADD45AP24522 165 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 ATP5A1P25705 553 aaKnown RBP7.55□□□□□ -1.2
NEDD9-204ENST00000448183 TAS2R43P59537 309 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 VAMP2P63027 116 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 PRKCDQ05655 676 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 RIPPLY1Q0D2K3 151 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 EFR3AQ14156 821 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 LRRC32Q14392 662 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 TBRG1Q3YBR2 411 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 FAM76BQ5HYJ3 339 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 LRRC73Q5JTD7 316 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 TCEANCQ8N8B7 351 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 FBXO22Q8NEZ5 403 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 PROKR2Q8NFJ6 384 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 OR2L2Q8NH16 312 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 GAL3ST3Q96A11 431 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 NXPE2Q96DL1 559 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 ADAD1Q96M93 576 aaKnown RBP7.55□□□□□ -1.2
NEDD9-204ENST00000448183 ZSCAN5AQ9BUG6 496 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 ASPNQ9BXN1 380 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 CCM2LQ9NUG4 571 aaPredicted RBP7.55□□□□□ -1.2
NEDD9-204ENST00000448183 DUS2Q9NX74 493 aaKnown RBP7.55□□□□□ -1.2
NEDD9-204ENST00000448183 MGAT4BQ9UQ53 548 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 ANKRD66B4E2M5 251 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 H7C2Y5 167 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 J3KR12 359 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 ADAMTS3O15072 1205 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 SOX14O95416 240 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 SNAP29O95721 258 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 TBX18O95935 607 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 CH25HO95992 272 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 ALPIP09923 528 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 GDF5P43026 501 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 CLCN2P51788 898 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 PGDP52209 483 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 DGKEP52429 567 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 GNG2P59768 71 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 ERVK-21P61565 698 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 PTCHD3Q3KNS1 767 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 NANOGP8Q6NSW7 305 aa7.55□□□□□ -1.2
NEDD9-204ENST00000448183 SHQ1Q6PI26 577 aaKnown RBP7.55□□□□□ -1.2
NEDD9-204ENST00000448183 IGDCC3Q8IVU1 814 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms