RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 GABRR3A8MPY1 467 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 A8MUI8 341 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 C2orf74A8MZ97 194 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 QSOX1O00391 747 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 DDX3XO00571 662 aaKnown RBP eCLIP3.04□□□□□ -1.927e-11■■■□□ 18.9
PMS1-215ENST00000447232 PDE9AO76083 593 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 CDK14O94921 469 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 PEX11BO96011 259 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 IGFBP5P24593 272 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 CXCR2P25025 360 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 NDUFS1P28331 727 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 RFC3P40938 356 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 GABRB2P47870 512 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 EFNA3P52797 238 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 SNX16P57768 344 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 VLDLRP98155 873 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 IL10RBQ08334 325 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 XRCC4Q13426 336 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 NFE2L1Q14494 772 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 SQLEQ14534 574 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 DPY19L1Q2PZI1 675 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 TMEM249Q2WGJ8 235 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 C1orf185Q5T7R7 199 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 METRNLQ641Q3 311 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 PDPK2PQ6A1A2 396 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 PLAG1Q6DJT9 500 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 ARHGAP36Q6ZRI8 547 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 AMZ2Q86W34 360 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 CPNE8Q86YQ8 564 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 PASD1Q8IV76 773 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 PRSS58Q8IYP2 241 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 PYROXD2Q8N2H3 581 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 ACVR1CQ8NER5 493 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 FLVCR1-AS1Q8TAF5 88 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 CREB3L4Q8TEY5 395 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 ALG3Q92685 438 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 EID2BQ96D98 161 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 RCC1LQ96I51 464 aaKnown RBP3.04□□□□□ -1.92
PMS1-215ENST00000447232 CELF6Q96J87 481 aaKnown RBP3.04□□□□□ -1.92
PMS1-215ENST00000447232 ZNF285Q96NJ3 590 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 NUP85Q9BW27 656 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 THAP2Q9H0W7 228 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 SRMSQ9H3Y6 488 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 ZDHHC11Q9H8X9 412 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 UPF2Q9HAU5 1272 aaKnown RBP3.04□□□□□ -1.92
PMS1-215ENST00000447232 CUTCQ9NTM9 273 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 EURLQ9NYK6 297 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 ACTR10Q9NZ32 417 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 NFKBIL1Q9UBC1 381 aaPredicted RBP3.04□□□□□ -1.92
PMS1-215ENST00000447232 ZNF629Q9UEG4 869 aaPredicted RBP3.04□□□□□ -1.92
PMS1-215ENST00000447232 CGGBP1Q9UFW8 167 aaPredicted RBP3.04□□□□□ -1.92
PMS1-215ENST00000447232 TMPRSS11EQ9UL52 423 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 EIF3LQ9Y262 564 aaKnown RBP3.04□□□□□ -1.92
PMS1-215ENST00000447232 TENM3Q9P273 2699 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 A0A1B0GVC2 190 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 GRID2IPA4D2P6 1211 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 ARHGAP42A6NI28 874 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 H3BQV1 296 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 GAPDHSO14556 408 aaPredicted RBP3.04□□□□□ -1.92
PMS1-215ENST00000447232 PPM1BO75688 479 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 POP7O75817 140 aaKnown RBP3.04□□□□□ -1.92
PMS1-215ENST00000447232 VENTXO95231 258 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 IGHG3P01860 377 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 CREB1P16220 341 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 LOXP28300 417 aaPredicted RBP3.04□□□□□ -1.92
PMS1-215ENST00000447232 CEACAM8P31997 349 aaPredicted RBP3.04□□□□□ -1.92
PMS1-215ENST00000447232 HSPA9P38646 679 aaKnown RBP3.04□□□□□ -1.92
PMS1-215ENST00000447232 EMP2P54851 167 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 CASP9P55211 416 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 SLC7A5Q01650 507 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 OCA2Q04671 838 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 TRIM14Q14142 442 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 IHHQ14623 411 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 DCAF17Q5H9S7 520 aaPredicted RBP3.04□□□□□ -1.92
PMS1-215ENST00000447232 FIGNQ5HY92 759 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 FAM102AQ5T9C2 384 aaPredicted RBP3.04□□□□□ -1.92
PMS1-215ENST00000447232 TRIM73Q86UV7 250 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 TRAPPC5Q8IUR0 188 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 NDUFAF2Q8N183 169 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 TRAM1L1Q8N609 369 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 LCN9Q8WX39 176 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 CPA5Q8WXQ8 436 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 CENPIQ92674 756 aaPredicted RBP3.04□□□□□ -1.92
PMS1-215ENST00000447232 KIAA1191Q96A73 305 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 C12orf66Q96MD2 445 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 ZNF599Q96NL3 588 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 OR2A14Q96R47 310 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 ZSCAN5AQ9BUG6 496 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 WWP1Q9H0M0 922 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 TFB2MQ9H5Q4 396 aaKnown RBP3.04□□□□□ -1.92
PMS1-215ENST00000447232 CXorf56Q9H5V9 222 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 PSD3Q9NYI0 1048 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 PKD2L2Q9NZM6 624 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 DUSP10Q9Y6W6 482 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 MAU2Q9Y6X3 613 aa3.04□□□□□ -1.92
PMS1-215ENST00000447232 LOC100653049A0A140TA62 436 aa3.03□□□□□ -1.92
PMS1-215ENST00000447232 BECN2A8MW95 431 aa3.03□□□□□ -1.92
PMS1-215ENST00000447232 KRT34O76011 436 aa3.03□□□□□ -1.92
PMS1-215ENST00000447232 PRLP01236 227 aa3.03□□□□□ -1.92
PMS1-215ENST00000447232 EPB41P11171 864 aaKnown RBP3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms