RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 GABARAPL3Q9BY60 117 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 ZNF408Q9H9D4 720 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 FKBP14Q9NWM8 211 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 KCNN3Q9UGI6 736 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 PCDHGC4Q9Y5F7 938 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 TNPO3Q9Y5L0 923 aaKnown RBP13.5□□□□□ -0.25
VPS52-212ENST00000445902 POLR1CO15160 346 aaPredicted RBP13.5□□□□□ -0.25
VPS52-212ENST00000445902 DDX5P17844 614 aaKnown RBP13.5□□□□□ -0.25
VPS52-212ENST00000445902 HTR7P34969 479 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 PBX3P40426 434 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 KIR2DL3P43628 341 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 TBX4P57082 545 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 OLR1P78380 273 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 TJAP1Q5JTD0 557 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 PXDC1Q5TGL8 231 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 PTOV1Q86YD1 416 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 NLGN4YQ8NFZ3 816 aaPredicted RBP13.5□□□□□ -0.25
VPS52-212ENST00000445902 OR6J1Q8NGC5 347 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 OR9Q2Q8NGE9 314 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 TBC1D20Q96BZ9 403 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 RNF121Q9H920 327 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 ABCB9Q9NP78 766 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 TMEM248Q9NWD8 314 aa13.5□□□□□ -0.25
VPS52-212ENST00000445902 ARIH1Q9Y4X5 557 aaPredicted RBP13.5□□□□□ -0.25
VPS52-212ENST00000445902 F8W810 466 aa13.49□□□□□ -0.25
VPS52-212ENST00000445902 TNFRSF11BO00300 401 aa13.49□□□□□ -0.25
VPS52-212ENST00000445902 FPGTO14772 594 aa13.49□□□□□ -0.25
VPS52-212ENST00000445902 PDYNP01213 254 aa13.49□□□□□ -0.25
VPS52-212ENST00000445902 SEMG1P04279 462 aa13.49□□□□□ -0.25
VPS52-212ENST00000445902 PSKH1P11801 424 aa13.49□□□□□ -0.25
VPS52-212ENST00000445902 SMPD1P17405 629 aa13.49□□□□□ -0.25
VPS52-212ENST00000445902 POU3F3P20264 500 aaPredicted RBP13.49□□□□□ -0.25
VPS52-212ENST00000445902 PKLRP30613 574 aa13.49□□□□□ -0.25
VPS52-212ENST00000445902 KCNQ1P51787 676 aa13.49□□□□□ -0.25
VPS52-212ENST00000445902 CLCN7P51798 805 aa13.49□□□□□ -0.25
VPS52-212ENST00000445902 SERINC3Q13530 473 aa13.49□□□□□ -0.25
VPS52-212ENST00000445902 CLECL1Q8IZS7 167 aa13.49□□□□□ -0.25
VPS52-212ENST00000445902 ENKURQ8TC29 256 aa13.49□□□□□ -0.25
VPS52-212ENST00000445902 GTPBP3Q969Y2 492 aaKnown RBP13.49□□□□□ -0.25
VPS52-212ENST00000445902 GFM1Q96RP9 751 aaKnown RBP13.49□□□□□ -0.25
VPS52-212ENST00000445902 PLCXD1Q9NUJ7 323 aa13.49□□□□□ -0.25
VPS52-212ENST00000445902 CLCA3PQ9Y6N3 262 aa13.49□□□□□ -0.25
VPS52-212ENST00000445902 GREB1Q4ZG55 1949 aa13.49□□□□□ -0.25
VPS52-212ENST00000445902 PLXNA4Q9HCM2 1894 aa13.49□□□□□ -0.25
VPS52-212ENST00000445902 UNCXA6NJT0 531 aa13.49□□□□□ -0.25
VPS52-212ENST00000445902 C2orf81A6NN90 581 aa13.49□□□□□ -0.25
VPS52-212ENST00000445902 B3GAT3O94766 335 aa13.49□□□□□ -0.25
VPS52-212ENST00000445902 CSF3P09919 207 aa13.49□□□□□ -0.25
VPS52-212ENST00000445902 RPS5P46782 204 aaKnown RBP13.49□□□□□ -0.25
VPS52-212ENST00000445902 GPR15P49685 360 aa13.49□□□□□ -0.25
VPS52-212ENST00000445902 CDH12P55289 794 aa13.49□□□□□ -0.25
VPS52-212ENST00000445902 ALDH6A1Q02252 535 aaKnown RBP13.49□□□□□ -0.25
VPS52-212ENST00000445902 IL10RBQ08334 325 aa13.49□□□□□ -0.25
VPS52-212ENST00000445902 CSTF3Q12996 717 aaKnown RBP13.49□□□□□ -0.25
VPS52-212ENST00000445902 EIF3MQ7L2H7 374 aaKnown RBP13.49□□□□□ -0.25
VPS52-212ENST00000445902 VWA5B2Q8N398 1253 aa13.49□□□□□ -0.25
VPS52-212ENST00000445902 OR10G2Q8NGC3 310 aa13.49□□□□□ -0.25
VPS52-212ENST00000445902 PEX13Q92968 403 aa13.49□□□□□ -0.25
VPS52-212ENST00000445902 SERPINB11Q96P15 392 aa13.49□□□□□ -0.25
VPS52-212ENST00000445902 SPON2Q9BUD6 331 aa13.49□□□□□ -0.25
VPS52-212ENST00000445902 MALT1Q9UDY8 824 aa13.49□□□□□ -0.25
VPS52-212ENST00000445902 AP3M1Q9Y2T2 418 aa13.49□□□□□ -0.25
VPS52-212ENST00000445902 ALPK3Q96L96 1907 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 WASH4PA8MWX3 477 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 PLK4O00444 970 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 OR2B3O76000 313 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 THP07101 528 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 POU1F1P28069 291 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 TTPAP49638 278 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 PSPHP78330 225 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 PPIGQ13427 754 aaKnown RBP eCLIP13.48□□□□□ -0.253e-7■■■■□ 19.8
VPS52-212ENST00000445902 C5orf22Q49AR2 442 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 PYDC2Q56P42 97 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 MOB2Q70IA6 237 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 CBLL1Q75N03 491 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 ZNF367Q7RTV3 350 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 APOBEC3FQ8IUX4 373 aaKnown RBP13.48□□□□□ -0.25
VPS52-212ENST00000445902 GRAMD2AQ8IUY3 354 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 ZNF683Q8IZ20 524 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 CLDN19Q8N6F1 224 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 KCNJ9Q92806 393 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 APOLD1Q96LR9 279 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 TRIB3Q96RU7 358 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 CLEC2DQ9UHP7 191 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 A0A075B6Q4 140 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 TNFRSF21O75509 655 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 CYP17A1P05093 508 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 CLEC2LP0C7M8 214 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 HOXB9P17482 250 aaPredicted RBP13.48□□□□□ -0.25
VPS52-212ENST00000445902 CRYBA2P53672 197 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 RAB25P57735 213 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 POU6F2P78424 691 aaPredicted RBP13.48□□□□□ -0.25
VPS52-212ENST00000445902 RUNX1T1Q06455 604 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 ARHGEF7Q14155 803 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 NFE2L1Q14494 772 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 QPRTQ15274 297 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 SF1Q15637 639 aaKnown RBP13.48□□□□□ -0.25
VPS52-212ENST00000445902 TATDN3Q17R31 274 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 TIMM50Q3ZCQ8 353 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 TOR2AQ5JU69 321 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms