RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 NEIL2Q969S2 332 aa14.02□□□□□ -0.17
USE1-202ENST00000445667 TM4SF19Q96DZ7 209 aa14.02□□□□□ -0.17
USE1-202ENST00000445667 THAP11Q96EK4 314 aa14.02□□□□□ -0.17
USE1-202ENST00000445667 MVB12AQ96EY5 273 aa14.02□□□□□ -0.17
USE1-202ENST00000445667 TSPAN17Q96FV3 270 aa14.02□□□□□ -0.17
USE1-202ENST00000445667 TSNARE1Q96NA8 513 aa14.02□□□□□ -0.17
USE1-202ENST00000445667 GPR22Q99680 433 aa14.02□□□□□ -0.17
USE1-202ENST00000445667 EGFL8Q99944 293 aa14.02□□□□□ -0.17
USE1-202ENST00000445667 CRB3Q9BUF7 120 aa14.02□□□□□ -0.17
USE1-202ENST00000445667 SEMA3GQ9NS98 782 aa14.02□□□□□ -0.17
USE1-202ENST00000445667 GPR83Q9NYM4 423 aa14.02□□□□□ -0.17
USE1-202ENST00000445667 DMGDHQ9UI17 866 aaKnown RBP14.02□□□□□ -0.17
USE1-202ENST00000445667 C3orf18Q9UK00 162 aa14.02□□□□□ -0.17
USE1-202ENST00000445667 FBXL4Q9UKA2 621 aa14.02□□□□□ -0.17
USE1-202ENST00000445667 ZNF451Q9Y4E5 1061 aa14.02□□□□□ -0.17
USE1-202ENST00000445667 OARD1Q9Y530 152 aa14.02□□□□□ -0.17
USE1-202ENST00000445667 MDC1Q14676 2089 aaKnown RBP14.02□□□□□ -0.17
USE1-202ENST00000445667 IGLV3-12A0A075B6K2 115 aa14.01□□□□□ -0.17
USE1-202ENST00000445667 NCF1BA6NI72 391 aaPredicted RBP14.01□□□□□ -0.17
USE1-202ENST00000445667 NCF1CA8MVU1 366 aaPredicted RBP14.01□□□□□ -0.17
USE1-202ENST00000445667 OR1F1O43749 312 aa14.01□□□□□ -0.17
USE1-202ENST00000445667 WISP1O95388 367 aa14.01□□□□□ -0.17
USE1-202ENST00000445667 IGHEP01854 428 aa14.01□□□□□ -0.17
USE1-202ENST00000445667 CCDC166P0CW27 439 aa14.01□□□□□ -0.17
USE1-202ENST00000445667 NCF1P14598 390 aaPredicted RBP14.01□□□□□ -0.17
USE1-202ENST00000445667 STMN1P16949 149 aa14.01□□□□□ -0.17
USE1-202ENST00000445667 SPRP35270 261 aaPredicted RBP14.01□□□□□ -0.17
USE1-202ENST00000445667 GRK3P35626 688 aa14.01□□□□□ -0.17
USE1-202ENST00000445667 ILF2Q12905 390 aaKnown RBP14.01□□□□□ -0.17
USE1-202ENST00000445667 FAM53BQ14153 422 aa14.01□□□□□ -0.17
USE1-202ENST00000445667 IGFBP7Q16270 282 aa14.01□□□□□ -0.17
USE1-202ENST00000445667 NADK2Q4G0N4 442 aa14.01□□□□□ -0.17
USE1-202ENST00000445667 GRTP1Q5TC63 336 aa14.01□□□□□ -0.17
USE1-202ENST00000445667 FRA10AC1Q70Z53 315 aa14.01□□□□□ -0.17
USE1-202ENST00000445667 ASPGQ86U10 573 aa14.01□□□□□ -0.17
USE1-202ENST00000445667 MFSD9Q8NBP5 474 aa14.01□□□□□ -0.17
USE1-202ENST00000445667 KCT2Q8NC54 265 aa14.01□□□□□ -0.17
USE1-202ENST00000445667 OR4K1Q8NGD4 311 aa14.01□□□□□ -0.17
USE1-202ENST00000445667 ZCCHC10Q8TBK6 192 aa14.01□□□□□ -0.17
USE1-202ENST00000445667 SLC13A3Q8WWT9 602 aa14.01□□□□□ -0.17
USE1-202ENST00000445667 NACC2Q96BF6 587 aa14.01□□□□□ -0.17
USE1-202ENST00000445667 C8orf44Q96CB5 159 aa14.01□□□□□ -0.17
USE1-202ENST00000445667 MRRFQ96E11 262 aaKnown RBP14.01□□□□□ -0.17
USE1-202ENST00000445667 MFRPQ9BY79 579 aa14.01□□□□□ -0.17
USE1-202ENST00000445667 DERL2Q9GZP9 239 aa14.01□□□□□ -0.17
USE1-202ENST00000445667 SPNS1Q9H2V7 528 aa14.01□□□□□ -0.17
USE1-202ENST00000445667 ATP13A2Q9NQ11 1180 aa14.01□□□□□ -0.17
USE1-202ENST00000445667 G3BP2Q9UN86 482 aaKnown RBP14.01□□□□□ -0.17
USE1-202ENST00000445667 SLC22A14Q9Y267 594 aa14.01□□□□□ -0.17
USE1-202ENST00000445667 PRPF4O43172 522 aaKnown RBP eCLIP14□□□□□ -0.17
USE1-202ENST00000445667 IL1RNP18510 177 aa14□□□□□ -0.17
USE1-202ENST00000445667 STX2P32856 288 aa14□□□□□ -0.17
USE1-202ENST00000445667 GDF5P43026 501 aa14□□□□□ -0.17
USE1-202ENST00000445667 AVPR1BP47901 424 aa14□□□□□ -0.17
USE1-202ENST00000445667 EMP2P54851 167 aa14□□□□□ -0.17
USE1-202ENST00000445667 MLLT10P55197 1068 aa14□□□□□ -0.17
USE1-202ENST00000445667 CDKL1Q00532 357 aa14□□□□□ -0.17
USE1-202ENST00000445667 AIMP2Q13155 320 aaKnown RBP14□□□□□ -0.17
USE1-202ENST00000445667 CSHL1Q14406 222 aa14□□□□□ -0.17
USE1-202ENST00000445667 UBAP2Q5T6F2 1119 aaKnown RBP14□□□□□ -0.17
USE1-202ENST00000445667 FAAH2Q6GMR7 532 aa14□□□□□ -0.17
USE1-202ENST00000445667 TMEM214Q6NUQ4 689 aaKnown RBP14□□□□□ -0.17
USE1-202ENST00000445667 ADAMTSL2Q86TH1 951 aa14□□□□□ -0.17
USE1-202ENST00000445667 PARP9Q8IXQ6 854 aa14□□□□□ -0.17
USE1-202ENST00000445667 CAMKVQ8NCB2 501 aa14□□□□□ -0.17
USE1-202ENST00000445667 OR11G2Q8NGC1 345 aa14□□□□□ -0.17
USE1-202ENST00000445667 SLC5A11Q8WWX8 675 aa14□□□□□ -0.17
USE1-202ENST00000445667 MOCOSQ96EN8 888 aa14□□□□□ -0.17
USE1-202ENST00000445667 SMAD5Q99717 465 aaKnown RBP14□□□□□ -0.17
USE1-202ENST00000445667 ZNF552Q9H707 407 aaPredicted RBP14□□□□□ -0.17
USE1-202ENST00000445667 MKKSQ9NPJ1 570 aaPredicted RBP14□□□□□ -0.17
USE1-202ENST00000445667 DYRK1BQ9Y463 629 aa14□□□□□ -0.17
USE1-202ENST00000445667 MAP4K5Q9Y4K4 846 aa14□□□□□ -0.17
USE1-202ENST00000445667 PCDHGB7Q9Y5F8 929 aa14□□□□□ -0.17
USE1-202ENST00000445667 TRBC2A0A5B9 178 aa13.99□□□□□ -0.17
USE1-202ENST00000445667 CTAGE15A4D2H0 777 aa13.99□□□□□ -0.17
USE1-202ENST00000445667 IDSB3KWA1 339 aa13.99□□□□□ -0.17
USE1-202ENST00000445667 SGK494L7N484 410 aa13.99□□□□□ -0.17
USE1-202ENST00000445667 WDR47O94967 919 aa13.99□□□□□ -0.17
USE1-202ENST00000445667 SERPIND1P05546 499 aa13.99□□□□□ -0.17
USE1-202ENST00000445667 HEXBP07686 556 aa13.99□□□□□ -0.17
USE1-202ENST00000445667 CTAGE8P0CG41 777 aa13.99□□□□□ -0.17
USE1-202ENST00000445667 CD1DP15813 335 aa13.99□□□□□ -0.17
USE1-202ENST00000445667 ITGA3P26006 1051 aa13.99□□□□□ -0.17
USE1-202ENST00000445667 CSRP3P50461 194 aa13.99□□□□□ -0.17
USE1-202ENST00000445667 SOX8P57073 446 aa13.99□□□□□ -0.17
USE1-202ENST00000445667 RAB10P61026 200 aa13.99□□□□□ -0.17
USE1-202ENST00000445667 KCNC4Q03721 635 aa13.99□□□□□ -0.17
USE1-202ENST00000445667 MYBPC3Q14896 1274 aa13.99□□□□□ -0.17
USE1-202ENST00000445667 TGFBIQ15582 683 aa13.99□□□□□ -0.17
USE1-202ENST00000445667 OR4D1Q15615 310 aa13.99□□□□□ -0.17
USE1-202ENST00000445667 ZKSCAN8Q15776 578 aaPredicted RBP13.99□□□□□ -0.17
USE1-202ENST00000445667 TUBB8Q3ZCM7 444 aa13.99□□□□□ -0.17
USE1-202ENST00000445667 FBXO48Q5FWF7 155 aa13.99□□□□□ -0.17
USE1-202ENST00000445667 VWA5B1Q5TIE3 1220 aa13.99□□□□□ -0.17
USE1-202ENST00000445667 ATG9BQ674R7 924 aa13.99□□□□□ -0.17
USE1-202ENST00000445667 NXPE4Q6UWF7 544 aa13.99□□□□□ -0.17
USE1-202ENST00000445667 CMC1Q7Z7K0 106 aa13.99□□□□□ -0.17
USE1-202ENST00000445667 CTAGE6Q86UF2 777 aa13.99□□□□□ -0.17
USE1-202ENST00000445667 CTAGE4Q8IX94 777 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms