RNA–Protein interactions for RNA: ENST00000445623.1

TIMP1-204, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2

Gene TIMP1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-204ENST00000445623 SIDT1Q9NXL6 827 aaKnown RBP12.61□□□□□ -0.39
TIMP1-204ENST00000445623 SERTAD3Q9UJW9 196 aa12.61□□□□□ -0.39
TIMP1-204ENST00000445623 SNX6Q9UNH7 406 aa12.61□□□□□ -0.39
TIMP1-204ENST00000445623 RNF11Q9Y3C5 154 aa12.61□□□□□ -0.39
TIMP1-204ENST00000445623 PCDHGA4Q9Y5G9 962 aa12.61□□□□□ -0.39
TIMP1-204ENST00000445623 PTPRBP23467 1997 aa12.61□□□□□ -0.39
TIMP1-204ENST00000445623 MDC1Q14676 2089 aaKnown RBP12.6□□□□□ -0.39
TIMP1-204ENST00000445623 H0YIV9 168 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 PLD2O14939 933 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 PRAMEF4O60810 478 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 OR4F21O95013 312 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 CHEK2O96017 543 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 KRT6AP02538 564 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 KRT6BP04259 564 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 PCNAP12004 261 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 CD22P20273 847 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 KRT6CP48668 564 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 ITGA1P56199 1179 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 ERVPABLB-1P60509 514 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 SH3BP2P78314 561 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 RGS1Q08116 209 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 BST1Q10588 318 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 GPR19Q15760 415 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 DEFB110Q30KQ9 67 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 TMEM164Q5U3C3 297 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 PRAMEF9Q5VWM5 478 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 LETMD1Q6P1Q0 360 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 FBXO42Q6P3S6 717 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 TLDC1Q6P9B6 456 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 DGLUCYQ7Z3D6 616 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 SYVN1Q86TM6 617 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 ASPGQ86U10 573 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 PPP1R3BQ86XI6 285 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 PLD3Q8IV08 490 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 LAS2Q8IYD9 372 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 CDYL2Q8N8U2 506 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 TTC29Q8NA56 475 aaPredicted RBP12.6□□□□□ -0.39
TIMP1-204ENST00000445623 CAMKVQ8NCB2 501 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 ZNF740Q8NDX6 193 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 METTL6Q8TCB7 284 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 MAGEB18Q96M61 343 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 OR2A5Q96R48 311 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 OR6C1Q96RD1 312 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 ILKAPQ9H0C8 392 aaPredicted RBP12.6□□□□□ -0.39
TIMP1-204ENST00000445623 ELOVL6Q9H5J4 265 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 FBXO8Q9NRD0 319 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 OCIAD1Q9NX40 245 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 ZFP69BQ9UJL9 534 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.6□□□□□ -0.39
TIMP1-204ENST00000445623 TSC22D4Q9Y3Q8 395 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 AP1M2Q9Y6Q5 423 aa12.6□□□□□ -0.39
TIMP1-204ENST00000445623 URADA6NGE7 173 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 H0YGG7 62 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 AGRPO00253 132 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 PPP6CO00743 305 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 UBFD1O14562 309 aaKnown RBP12.59□□□□□ -0.39
TIMP1-204ENST00000445623 AZIN1O14977 448 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 POLR1CO15160 346 aaPredicted RBP12.59□□□□□ -0.39
TIMP1-204ENST00000445623 ZSCAN9O15535 394 aaPredicted RBP12.59□□□□□ -0.39
TIMP1-204ENST00000445623 NDUFS4O43181 175 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 NRP2O60462 931 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 OR2B3O76000 313 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 EIF2S1P05198 315 aaKnown RBP12.59□□□□□ -0.39
TIMP1-204ENST00000445623 SERPIND1P05546 499 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 CAPN1P07384 714 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 CHRNGP07510 517 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 UROSP10746 265 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 PIK3CBP42338 1070 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 CCR10P46092 362 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 GABRA4P48169 554 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 VSX2P58304 361 aaPredicted RBP12.59□□□□□ -0.39
TIMP1-204ENST00000445623 ARF3P61204 181 aaPredicted RBP12.59□□□□□ -0.39
TIMP1-204ENST00000445623 MC2RQ01718 297 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 ZNF33BQ06732 778 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 FOXC1Q12948 553 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 PWP1Q13610 501 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 GRM7Q14831 915 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 ZRSR2Q15696 482 aaKnown RBP12.59□□□□□ -0.39
TIMP1-204ENST00000445623 C3orf38Q5JPI3 329 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 MANEAQ5SRI9 462 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 DCAF12Q5T6F0 453 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 FRG2Q64ET8 278 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 CEACAM20Q6UY09 585 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.59□□□□□ -0.39
TIMP1-204ENST00000445623 CSNK1A1LQ8N752 337 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 BMPERQ8N8U9 685 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 OR7G3Q8NG95 312 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 CKAP2Q8WWK9 683 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 SLC13A3Q8WWT9 602 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 CCT6BQ92526 530 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 ZNF75CPQ92670 426 aaPredicted RBP12.59□□□□□ -0.39
TIMP1-204ENST00000445623 ZNF501Q96CX3 271 aaPredicted RBP12.59□□□□□ -0.39
TIMP1-204ENST00000445623 FCRL4Q96PJ5 515 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 TEFMQ96QE5 360 aaKnown RBP12.59□□□□□ -0.39
TIMP1-204ENST00000445623 FRG2BQ96QU4 278 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 CENPKQ9BS16 269 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 ZPBPQ9BS86 351 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 SHCBP1LQ9BZQ2 653 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 SPNS1Q9H2V7 528 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 RHBGQ9H310 441 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms