RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 FADS3Q9Y5Q0 445 aa10.9□□□□□ -0.66
FN1-211ENST00000443816 PCM1Q15154 2024 aa10.9□□□□□ -0.66
FN1-211ENST00000443816 ZNF879B4DU55 563 aa10.9□□□□□ -0.66
FN1-211ENST00000443816 NPIPA2E9PIF3 369 aa10.9□□□□□ -0.66
FN1-211ENST00000443816 NPIPA3F8WFD2 350 aa10.9□□□□□ -0.66
FN1-211ENST00000443816 JUNP05412 331 aaKnown RBP10.9□□□□□ -0.66
FN1-211ENST00000443816 VSX2P58304 361 aaPredicted RBP10.9□□□□□ -0.66
FN1-211ENST00000443816 PON2Q15165 354 aa10.9□□□□□ -0.66
FN1-211ENST00000443816 PAMR1Q6UXH9 720 aa10.9□□□□□ -0.66
FN1-211ENST00000443816 TMPPEQ6ZT21 453 aa10.9□□□□□ -0.66
FN1-211ENST00000443816 GPR65Q8IYL9 337 aa10.9□□□□□ -0.66
FN1-211ENST00000443816 HERPUD2Q9BSE4 406 aa10.9□□□□□ -0.66
FN1-211ENST00000443816 ABCB10Q9NRK6 738 aa10.9□□□□□ -0.66
FN1-211ENST00000443816 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.9□□□□□ -0.66
FN1-211ENST00000443816 LGALS13Q9UHV8 139 aa10.9□□□□□ -0.66
FN1-211ENST00000443816 POU2F3Q9UKI9 436 aa10.9□□□□□ -0.66
FN1-211ENST00000443816 ZFR2Q9UPR6 939 aaKnown RBP10.9□□□□□ -0.66
FN1-211ENST00000443816 LCHNA4D1U4 455 aa10.9□□□□□ -0.66
FN1-211ENST00000443816 CLIC1O00299 241 aa10.9□□□□□ -0.66
FN1-211ENST00000443816 KAT7O95251 611 aa10.9□□□□□ -0.66
FN1-211ENST00000443816 CER1O95813 267 aa10.9□□□□□ -0.66
FN1-211ENST00000443816 CSTBP04080 98 aaKnown RBP10.9□□□□□ -0.66
FN1-211ENST00000443816 GSTM3P21266 225 aa10.9□□□□□ -0.66
FN1-211ENST00000443816 RPS3AP61247 264 aaKnown RBP10.9□□□□□ -0.66
FN1-211ENST00000443816 ZNF280BQ86YH2 543 aa10.9□□□□□ -0.66
FN1-211ENST00000443816 CD180Q99467 661 aa10.9□□□□□ -0.66
FN1-211ENST00000443816 SAGE1Q9NXZ1 904 aa10.9□□□□□ -0.66
FN1-211ENST00000443816 OR51F1A6NGY5 319 aa10.9□□□□□ -0.66
FN1-211ENST00000443816 KRT36O76013 467 aa10.9□□□□□ -0.66
FN1-211ENST00000443816 SEMA4FO95754 770 aa10.9□□□□□ -0.66
FN1-211ENST00000443816 LMAN2Q12907 356 aa10.9□□□□□ -0.66
FN1-211ENST00000443816 CST6Q15828 149 aa10.9□□□□□ -0.66
FN1-211ENST00000443816 NANOGNBQ7Z5D8 188 aa10.9□□□□□ -0.66
FN1-211ENST00000443816 DNAJA4Q8WW22 397 aaPredicted RBP10.9□□□□□ -0.66
FN1-211ENST00000443816 RMI1Q9H9A7 625 aa10.9□□□□□ -0.66
FN1-211ENST00000443816 ZDHHC7Q9NXF8 308 aa10.9□□□□□ -0.66
FN1-211ENST00000443816 SMPD3Q9NY59 655 aaPredicted RBP10.9□□□□□ -0.66
FN1-211ENST00000443816 TAS2R7Q9NYW3 318 aa10.9□□□□□ -0.66
FN1-211ENST00000443816 NLGN3Q9NZ94 848 aa10.9□□□□□ -0.66
FN1-211ENST00000443816 FZD4Q9ULV1 537 aa10.9□□□□□ -0.66
FN1-211ENST00000443816 PLAGL1Q9UM63 463 aa10.9□□□□□ -0.66
FN1-211ENST00000443816 TCRBV7S2A1N4TA0A589 114 aa10.9□□□□□ -0.67
FN1-211ENST00000443816 ZNF623O75123 536 aa10.9□□□□□ -0.67
FN1-211ENST00000443816 FHP07954 510 aa10.9□□□□□ -0.67
FN1-211ENST00000443816 TSPAN5P62079 268 aa10.9□□□□□ -0.67
FN1-211ENST00000443816 CILP2Q8IUL8 1156 aa10.9□□□□□ -0.67
FN1-211ENST00000443816 TXNDC5Q8NBS9 432 aaKnown RBP10.9□□□□□ -0.67
FN1-211ENST00000443816 OR5L2Q8NGL0 311 aa10.9□□□□□ -0.67
FN1-211ENST00000443816 GLYATL1Q969I3 302 aa10.9□□□□□ -0.67
FN1-211ENST00000443816 NAA11Q9BSU3 229 aaPredicted RBP10.9□□□□□ -0.67
FN1-211ENST00000443816 SP140LQ9H930 580 aa10.9□□□□□ -0.67
FN1-211ENST00000443816 ZIM2Q9NZV7 527 aa10.9□□□□□ -0.67
FN1-211ENST00000443816 PCDH10Q9P2E7 1040 aa10.9□□□□□ -0.67
FN1-211ENST00000443816 TRPM6Q9BX84 2022 aa10.9□□□□□ -0.67
FN1-211ENST00000443816 hCG_2039718K7EN88 272 aa10.9□□□□□ -0.67
FN1-211ENST00000443816 DUOXA1Q1HG43 343 aa10.9□□□□□ -0.67
FN1-211ENST00000443816 ABCA11PQ4W5N1 156 aa10.9□□□□□ -0.67
FN1-211ENST00000443816 LIPJQ5W064 366 aa10.9□□□□□ -0.67
FN1-211ENST00000443816 CHERPQ8IWX8 916 aaKnown RBP10.9□□□□□ -0.67
FN1-211ENST00000443816 LRRC57Q8N9N7 239 aa10.9□□□□□ -0.67
FN1-211ENST00000443816 POC5Q8NA72 575 aa10.9□□□□□ -0.67
FN1-211ENST00000443816 OSTF1Q92882 214 aa10.9□□□□□ -0.67
FN1-211ENST00000443816 DAPL1A0PJW8 107 aa10.89□□□□□ -0.67
FN1-211ENST00000443816 GPR107Q5VW38 600 aa10.89□□□□□ -0.67
FN1-211ENST00000443816 DENND5AQ6IQ26 1287 aa10.89□□□□□ -0.67
FN1-211ENST00000443816 CDH24Q86UP0 819 aa10.89□□□□□ -0.67
FN1-211ENST00000443816 OSTM1Q86WC4 334 aa10.89□□□□□ -0.67
FN1-211ENST00000443816 CENPNQ96H22 339 aaPredicted RBP10.89□□□□□ -0.67
FN1-211ENST00000443816 COL21A1Q96P44 957 aa10.89□□□□□ -0.67
FN1-211ENST00000443816 SGIP1Q9BQI5 828 aa10.89□□□□□ -0.67
FN1-211ENST00000443816 A0A0D9SEW6 157 aa10.89□□□□□ -0.67
FN1-211ENST00000443816 OR6C74A6NCV1 312 aa10.89□□□□□ -0.67
FN1-211ENST00000443816 GJE1A6NN92 205 aa10.89□□□□□ -0.67
FN1-211ENST00000443816 PPEF2O14830 753 aa10.89□□□□□ -0.67
FN1-211ENST00000443816 HYAL2Q12891 473 aa10.89□□□□□ -0.67
FN1-211ENST00000443816 SF3B4Q15427 424 aaKnown RBP eCLIP10.89□□□□□ -0.672e-6■■■■□ 25.5
FN1-211ENST00000443816 PSMA8Q8TAA3 256 aa10.89□□□□□ -0.67
FN1-211ENST00000443816 ADAMTS18Q8TE60 1221 aa10.89□□□□□ -0.67
FN1-211ENST00000443816 CDK15Q96Q40 435 aa10.89□□□□□ -0.67
FN1-211ENST00000443816 SMOQ99835 787 aa10.89□□□□□ -0.67
FN1-211ENST00000443816 CD244Q9BZW8 370 aa10.89□□□□□ -0.67
FN1-211ENST00000443816 RAB26Q9ULW5 256 aa10.89□□□□□ -0.67
FN1-211ENST00000443816 SCN9AQ15858 1988 aa10.89□□□□□ -0.67
FN1-211ENST00000443816 BCAS2O75934 225 aaPredicted RBP10.89□□□□□ -0.67
FN1-211ENST00000443816 CD63P08962 238 aa10.89□□□□□ -0.67
FN1-211ENST00000443816 RAP2AP10114 183 aa10.89□□□□□ -0.67
FN1-211ENST00000443816 CDKN1CP49918 316 aaPredicted RBP10.89□□□□□ -0.67
FN1-211ENST00000443816 SMSP52788 366 aa10.89□□□□□ -0.67
FN1-211ENST00000443816 KCNJ2P63252 427 aa10.89□□□□□ -0.67
FN1-211ENST00000443816 MC1RQ01726 317 aa10.89□□□□□ -0.67
FN1-211ENST00000443816 ARL9Q6T311 187 aa10.89□□□□□ -0.67
FN1-211ENST00000443816 EZH1Q92800 747 aaPredicted RBP10.89□□□□□ -0.67
FN1-211ENST00000443816 ADAD1Q96M93 576 aaKnown RBP10.89□□□□□ -0.67
FN1-211ENST00000443816 CLEC4AQ9UMR7 237 aa10.89□□□□□ -0.67
FN1-211ENST00000443816 PIAS3Q9Y6X2 628 aa10.89□□□□□ -0.67
FN1-211ENST00000443816 MAP2K7O14733 419 aa10.89□□□□□ -0.67
FN1-211ENST00000443816 MSX2P35548 267 aaPredicted RBP10.89□□□□□ -0.67
FN1-211ENST00000443816 USP30Q70CQ3 517 aa10.89□□□□□ -0.67
FN1-211ENST00000443816 DUSP23Q9BVJ7 150 aa10.89□□□□□ -0.67
FN1-211ENST00000443816 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms