RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 SYT10Q6XYQ8 523 aa19.06■□□□□ 0.64
LRCH3-208ENST00000443727 VN1R4Q7Z5H5 301 aa19.06■□□□□ 0.64
LRCH3-208ENST00000443727 ASPGQ86U10 573 aa19.06■□□□□ 0.64
LRCH3-208ENST00000443727 IQCKQ8N0W5 287 aa19.06■□□□□ 0.64
LRCH3-208ENST00000443727 TBC1D19Q8N5T2 526 aa19.06■□□□□ 0.64
LRCH3-208ENST00000443727 Q8NA96 180 aa19.06■□□□□ 0.64
LRCH3-208ENST00000443727 GALNT11Q8NCW6 608 aa19.06■□□□□ 0.64
LRCH3-208ENST00000443727 SLC13A3Q8WWT9 602 aa19.06■□□□□ 0.64
LRCH3-208ENST00000443727 CDKL2Q92772 493 aa19.06■□□□□ 0.64
LRCH3-208ENST00000443727 FBXL8Q96CD0 374 aa19.06■□□□□ 0.64
LRCH3-208ENST00000443727 PDLIM5Q96HC4 596 aaKnown RBP19.06■□□□□ 0.64
LRCH3-208ENST00000443727 FAM129AQ9BZQ8 928 aa19.06■□□□□ 0.64
LRCH3-208ENST00000443727 MRPS2Q9Y399 296 aaKnown RBP19.06■□□□□ 0.64
LRCH3-208ENST00000443727 UTP11Q9Y3A2 253 aaKnown RBP19.06■□□□□ 0.64
LRCH3-208ENST00000443727 NSG1A0A0A6YYJ2 146 aa19.05■□□□□ 0.64
LRCH3-208ENST00000443727 NPEPPSL1A6NEC2 478 aa19.05■□□□□ 0.64
LRCH3-208ENST00000443727 BCL6P41182 706 aa19.05■□□□□ 0.64
LRCH3-208ENST00000443727 TAS2R39P59534 338 aa19.05■□□□□ 0.64
LRCH3-208ENST00000443727 MAT1AQ00266 395 aaKnown RBP19.05■□□□□ 0.64
LRCH3-208ENST00000443727 ILF2Q12905 390 aaKnown RBP19.05■□□□□ 0.64
LRCH3-208ENST00000443727 UBAP2LQ14157 1087 aaKnown RBP19.05■□□□□ 0.64
LRCH3-208ENST00000443727 SYT16Q17RD7 645 aa19.05■□□□□ 0.64
LRCH3-208ENST00000443727 PRR30Q53SZ7 412 aaPredicted RBP19.05■□□□□ 0.64
LRCH3-208ENST00000443727 MFSD4BQ5TF39 518 aa19.05■□□□□ 0.64
LRCH3-208ENST00000443727 TMEM207Q6UWW9 146 aa19.05■□□□□ 0.64
LRCH3-208ENST00000443727 NDUFAF7Q7L592 441 aa19.05■□□□□ 0.64
LRCH3-208ENST00000443727 ARHGEF39Q8N4T4 335 aa19.05■□□□□ 0.64
LRCH3-208ENST00000443727 OR56A3Q8NH54 315 aa19.05■□□□□ 0.64
LRCH3-208ENST00000443727 ZCCHC10Q8TBK6 192 aa19.05■□□□□ 0.64
LRCH3-208ENST00000443727 EGFL8Q99944 293 aa19.05■□□□□ 0.64
LRCH3-208ENST00000443727 MESP1Q9BRJ9 268 aa19.05■□□□□ 0.64
LRCH3-208ENST00000443727 TGIF2Q9GZN2 237 aa19.05■□□□□ 0.64
LRCH3-208ENST00000443727 RHOJQ9H4E5 214 aa19.05■□□□□ 0.64
LRCH3-208ENST00000443727 ANKHQ9HCJ1 492 aa19.05■□□□□ 0.64
LRCH3-208ENST00000443727 MKL2Q9ULH7 1088 aa19.05■□□□□ 0.64
LRCH3-208ENST00000443727 NOVA2Q9UNW9 492 aaKnown RBP19.05■□□□□ 0.64
LRCH3-208ENST00000443727 HECTD1Q9ULT8 2610 aa19.05■□□□□ 0.64
LRCH3-208ENST00000443727 H0YIG0 161 aa19.04■□□□□ 0.64
LRCH3-208ENST00000443727 CDC7O00311 574 aa19.04■□□□□ 0.64
LRCH3-208ENST00000443727 EIF3HO15372 352 aaKnown RBP eCLIP19.04■□□□□ 0.64
LRCH3-208ENST00000443727 OR1F1O43749 312 aa19.04■□□□□ 0.64
LRCH3-208ENST00000443727 PIAS1O75925 651 aa19.04■□□□□ 0.64
LRCH3-208ENST00000443727 UQCRHP07919 91 aa19.04■□□□□ 0.64
LRCH3-208ENST00000443727 SLC35G6P0C7Q6 338 aa19.04■□□□□ 0.64
LRCH3-208ENST00000443727 GNLYP22749 145 aa19.04■□□□□ 0.64
LRCH3-208ENST00000443727 SSTR1P30872 391 aa19.04■□□□□ 0.64
LRCH3-208ENST00000443727 MEF2AQ02078 507 aaPredicted RBP19.04■□□□□ 0.64
LRCH3-208ENST00000443727 EEF1A2Q05639 463 aaKnown RBP19.04■□□□□ 0.64
LRCH3-208ENST00000443727 CSHL1Q14406 222 aa19.04■□□□□ 0.64
LRCH3-208ENST00000443727 ZNF460Q14592 562 aa19.04■□□□□ 0.64
LRCH3-208ENST00000443727 ATG9BQ674R7 924 aa19.04■□□□□ 0.64
LRCH3-208ENST00000443727 TMEM214Q6NUQ4 689 aaKnown RBP19.04■□□□□ 0.64
LRCH3-208ENST00000443727 SBSNQ6UWP8 590 aa19.04■□□□□ 0.64
LRCH3-208ENST00000443727 FRA10AC1Q70Z53 315 aa19.04■□□□□ 0.64
LRCH3-208ENST00000443727 ZC3H7AQ8IWR0 971 aaKnown RBP19.04■□□□□ 0.64
LRCH3-208ENST00000443727 KBTBD2Q8IY47 623 aa19.04■□□□□ 0.64
LRCH3-208ENST00000443727 MFSD9Q8NBP5 474 aa19.04■□□□□ 0.64
LRCH3-208ENST00000443727 METTL21AQ8WXB1 218 aa19.04■□□□□ 0.64
LRCH3-208ENST00000443727 SLC29A3Q9BZD2 475 aa19.04■□□□□ 0.64
LRCH3-208ENST00000443727 RAB17Q9H0T7 212 aa19.04■□□□□ 0.64
LRCH3-208ENST00000443727 EPS8L2Q9H6S3 715 aa19.04■□□□□ 0.64
LRCH3-208ENST00000443727 ZBTB20Q9HC78 741 aaPredicted RBP19.04■□□□□ 0.64
LRCH3-208ENST00000443727 GPAMQ9HCL2 828 aa19.04■□□□□ 0.64
LRCH3-208ENST00000443727 CTNNAL1Q9UBT7 734 aa19.04■□□□□ 0.64
LRCH3-208ENST00000443727 IKZF3Q9UKT9 509 aa19.04■□□□□ 0.64
LRCH3-208ENST00000443727 DYRK1BQ9Y463 629 aa19.04■□□□□ 0.64
LRCH3-208ENST00000443727 MDC1Q14676 2089 aaKnown RBP19.04■□□□□ 0.64
LRCH3-208ENST00000443727 PCDH17O14917 1159 aa19.03■□□□□ 0.64
LRCH3-208ENST00000443727 LCMT2O60294 686 aaKnown RBP19.03■□□□□ 0.64
LRCH3-208ENST00000443727 NSA2O95478 260 aaKnown RBP19.03■□□□□ 0.64
LRCH3-208ENST00000443727 SERPIND1P05546 499 aa19.03■□□□□ 0.64
LRCH3-208ENST00000443727 IL1RNP18510 177 aa19.03■□□□□ 0.64
LRCH3-208ENST00000443727 PLTPP55058 493 aa19.03■□□□□ 0.64
LRCH3-208ENST00000443727 CBLBQ13191 982 aa19.03■□□□□ 0.64
LRCH3-208ENST00000443727 ZXDCQ2QGD7 858 aaPredicted RBP19.03■□□□□ 0.64
LRCH3-208ENST00000443727 MINDY4Q4G0A6 757 aa19.03■□□□□ 0.64
LRCH3-208ENST00000443727 PRSS41Q7RTY9 318 aa19.03■□□□□ 0.64
LRCH3-208ENST00000443727 CCDC25Q86WR0 208 aa19.03■□□□□ 0.64
LRCH3-208ENST00000443727 FAM26EQ8N5C1 309 aa19.03■□□□□ 0.64
LRCH3-208ENST00000443727 CISD2Q8N5K1 135 aaKnown RBP19.03■□□□□ 0.64
LRCH3-208ENST00000443727 KCT2Q8NC54 265 aa19.03■□□□□ 0.64
LRCH3-208ENST00000443727 ABHD11Q8NFV4 315 aa19.03■□□□□ 0.64
LRCH3-208ENST00000443727 SLC5A11Q8WWX8 675 aa19.03■□□□□ 0.64
LRCH3-208ENST00000443727 ANKRD7Q92527 254 aa19.03■□□□□ 0.64
LRCH3-208ENST00000443727 TM4SF19Q96DZ7 209 aa19.03■□□□□ 0.64
LRCH3-208ENST00000443727 TSNARE1Q96NA8 513 aa19.03■□□□□ 0.64
LRCH3-208ENST00000443727 WDR77Q9BQA1 342 aaPredicted RBP19.03■□□□□ 0.64
LRCH3-208ENST00000443727 HCN3Q9P1Z3 774 aa19.03■□□□□ 0.64
LRCH3-208ENST00000443727 PRRC2CQ9Y520 2896 aaKnown RBP19.03■□□□□ 0.64
LRCH3-208ENST00000443727 SGK494L7N484 410 aa19.02■□□□□ 0.64
LRCH3-208ENST00000443727 NDUFS4O43181 175 aa19.02■□□□□ 0.64
LRCH3-208ENST00000443727 BMP10O95393 424 aa19.02■□□□□ 0.64
LRCH3-208ENST00000443727 COX6A1P12074 109 aa19.02■□□□□ 0.64
LRCH3-208ENST00000443727 UQCRFS1P47985 274 aa19.02■□□□□ 0.64
LRCH3-208ENST00000443727 GLRBP48167 497 aa19.02■□□□□ 0.64
LRCH3-208ENST00000443727 POU4F1Q01851 419 aa19.02■□□□□ 0.64
LRCH3-208ENST00000443727 CAV1Q03135 178 aa19.02■□□□□ 0.64
LRCH3-208ENST00000443727 Q0VFX4 171 aa19.02■□□□□ 0.64
LRCH3-208ENST00000443727 ISLR2Q6UXK2 745 aa19.02■□□□□ 0.64
LRCH3-208ENST00000443727 LINC00696Q6ZRV3 163 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms