RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 SLC35G6P0C7Q6 338 aa11.16□□□□□ -0.62
TTC28-203ENST00000442232 SKP1P63208 163 aa11.16□□□□□ -0.62
TTC28-203ENST00000442232 MAT1AQ00266 395 aaKnown RBP11.16□□□□□ -0.62
TTC28-203ENST00000442232 PDAP1Q13442 181 aaKnown RBP11.16□□□□□ -0.62
TTC28-203ENST00000442232 SYT16Q17RD7 645 aa11.16□□□□□ -0.62
TTC28-203ENST00000442232 SPANXN3Q5MJ09 141 aa11.16□□□□□ -0.62
TTC28-203ENST00000442232 HIBCHQ6NVY1 386 aaPredicted RBP11.16□□□□□ -0.62
TTC28-203ENST00000442232 AGTRAPQ6RW13 159 aa11.16□□□□□ -0.62
TTC28-203ENST00000442232 C2CD4AQ8NCU7 369 aaPredicted RBP11.16□□□□□ -0.62
TTC28-203ENST00000442232 CATSPER1Q8NEC5 780 aa11.16□□□□□ -0.62
TTC28-203ENST00000442232 OR9A4Q8NGU2 314 aa11.16□□□□□ -0.62
TTC28-203ENST00000442232 ZCCHC10Q8TBK6 192 aa11.16□□□□□ -0.62
TTC28-203ENST00000442232 ACTRT1Q8TDG2 376 aa11.16□□□□□ -0.62
TTC28-203ENST00000442232 SIGLEC10Q96LC7 697 aa11.16□□□□□ -0.62
TTC28-203ENST00000442232 OSBPL9Q96SU4 736 aa11.16□□□□□ -0.62
TTC28-203ENST00000442232 NDNQ99608 321 aa11.16□□□□□ -0.62
TTC28-203ENST00000442232 MESP1Q9BRJ9 268 aa11.16□□□□□ -0.62
TTC28-203ENST00000442232 HAUS8Q9BT25 410 aa11.16□□□□□ -0.62
TTC28-203ENST00000442232 FAM129AQ9BZQ8 928 aa11.16□□□□□ -0.62
TTC28-203ENST00000442232 PARVBQ9HBI1 364 aa11.16□□□□□ -0.62
TTC28-203ENST00000442232 PPANQ9NQ55 473 aaKnown RBP11.16□□□□□ -0.62
TTC28-203ENST00000442232 MED16Q9Y2X0 877 aa11.16□□□□□ -0.62
TTC28-203ENST00000442232 NOTCH2Q04721 2471 aa11.16□□□□□ -0.62
TTC28-203ENST00000442232 POLEQ07864 2286 aa11.15□□□□□ -0.62
TTC28-203ENST00000442232 LOC102723996A0A087X1L8 192 aa11.15□□□□□ -0.62
TTC28-203ENST00000442232 A0A1B0GUH1 482 aa11.15□□□□□ -0.62
TTC28-203ENST00000442232 WIPF3A6NGB9 483 aa11.15□□□□□ -0.62
TTC28-203ENST00000442232 SLC16A5O15375 505 aa11.15□□□□□ -0.62
TTC28-203ENST00000442232 JRKO75564 520 aa11.15□□□□□ -0.62
TTC28-203ENST00000442232 CLDN1O95832 211 aa11.15□□□□□ -0.62
TTC28-203ENST00000442232 CRYABP02511 175 aaKnown RBP11.15□□□□□ -0.62
TTC28-203ENST00000442232 ITGAMP11215 1152 aa11.15□□□□□ -0.62
TTC28-203ENST00000442232 IL1RNP18510 177 aa11.15□□□□□ -0.62
TTC28-203ENST00000442232 XCR1P46094 333 aa11.15□□□□□ -0.62
TTC28-203ENST00000442232 AGTR2P50052 363 aa11.15□□□□□ -0.62
TTC28-203ENST00000442232 TNFSF10P50591 281 aa11.15□□□□□ -0.62
TTC28-203ENST00000442232 ZNF33BQ06732 778 aa11.15□□□□□ -0.62
TTC28-203ENST00000442232 PCOLCEQ15113 449 aa11.15□□□□□ -0.62
TTC28-203ENST00000442232 RNASEH2BQ5TBB1 312 aaKnown RBP11.15□□□□□ -0.62
TTC28-203ENST00000442232 CAPN13Q6MZZ7 669 aaPredicted RBP11.15□□□□□ -0.62
TTC28-203ENST00000442232 TMEM205Q6UW68 189 aa11.15□□□□□ -0.62
TTC28-203ENST00000442232 CYHR1Q6ZMK1 362 aa11.15□□□□□ -0.62
TTC28-203ENST00000442232 KIAA0408Q6ZU52 694 aa11.15□□□□□ -0.62
TTC28-203ENST00000442232 ASPGQ86U10 573 aa11.15□□□□□ -0.62
TTC28-203ENST00000442232 LRRC56Q8IYG6 542 aaPredicted RBP11.15□□□□□ -0.62
TTC28-203ENST00000442232 SLC35F6Q8N357 371 aa11.15□□□□□ -0.62
TTC28-203ENST00000442232 EEF1AKMT1Q8WVE0 214 aa11.15□□□□□ -0.62
TTC28-203ENST00000442232 HAS2Q92819 552 aa11.15□□□□□ -0.62
TTC28-203ENST00000442232 LINGO1Q96FE5 620 aa11.15□□□□□ -0.62
TTC28-203ENST00000442232 SLX1AQ9BQ83 275 aa11.15□□□□□ -0.62
TTC28-203ENST00000442232 VN1R1Q9GZP7 353 aa11.15□□□□□ -0.62
TTC28-203ENST00000442232 RNF32Q9H0A6 362 aa11.15□□□□□ -0.62
TTC28-203ENST00000442232 PLA2G3Q9NZ20 509 aa11.15□□□□□ -0.62
TTC28-203ENST00000442232 HCN3Q9P1Z3 774 aa11.15□□□□□ -0.62
TTC28-203ENST00000442232 PDE10AQ9Y233 779 aa11.15□□□□□ -0.62
TTC28-203ENST00000442232 NEU2Q9Y3R4 380 aa11.15□□□□□ -0.62
TTC28-203ENST00000442232 CENPEQ02224 2701 aa11.15□□□□□ -0.63
TTC28-203ENST00000442232 KCNE1BA0A087WTH5 132 aa11.14□□□□□ -0.63
TTC28-203ENST00000442232 OR5H15A6NDH6 313 aa11.14□□□□□ -0.63
TTC28-203ENST00000442232 CES2O00748 559 aa11.14□□□□□ -0.63
TTC28-203ENST00000442232 DNALI1O14645 258 aaPredicted RBP11.14□□□□□ -0.63
TTC28-203ENST00000442232 SEC24DO94855 1032 aaPredicted RBP11.14□□□□□ -0.63
TTC28-203ENST00000442232 RASAL1O95294 804 aa11.14□□□□□ -0.63
TTC28-203ENST00000442232 F10P00742 488 aa11.14□□□□□ -0.63
TTC28-203ENST00000442232 CDH1P12830 882 aa11.14□□□□□ -0.63
TTC28-203ENST00000442232 DCTP40126 519 aa11.14□□□□□ -0.63
TTC28-203ENST00000442232 IL2P60568 153 aa11.14□□□□□ -0.63
TTC28-203ENST00000442232 CSNK1G2P78368 415 aa11.14□□□□□ -0.63
TTC28-203ENST00000442232 RBPJQ06330 500 aa11.14□□□□□ -0.63
TTC28-203ENST00000442232 DHX9Q08211 1270 aaKnown RBP11.14□□□□□ -0.63
TTC28-203ENST00000442232 NAE1Q13564 534 aa11.14□□□□□ -0.63
TTC28-203ENST00000442232 BTBD16Q32M84 506 aa11.14□□□□□ -0.63
TTC28-203ENST00000442232 BBS9Q3SYG4 887 aa11.14□□□□□ -0.63
TTC28-203ENST00000442232 ZNF787Q6DD87 383 aa11.14□□□□□ -0.63
TTC28-203ENST00000442232 LCTLQ6UWM7 567 aa11.14□□□□□ -0.63
TTC28-203ENST00000442232 GFRALQ6UXV0 394 aa11.14□□□□□ -0.63
TTC28-203ENST00000442232 MBOAT1Q6ZNC8 495 aa11.14□□□□□ -0.63
TTC28-203ENST00000442232 CPEB2Q7Z5Q1 589 aaKnown RBP11.14□□□□□ -0.63
TTC28-203ENST00000442232 ARHGEF39Q8N4T4 335 aa11.14□□□□□ -0.63
TTC28-203ENST00000442232 GPATCH11Q8N954 259 aa11.14□□□□□ -0.63
TTC28-203ENST00000442232 OR51Q1Q8NH59 317 aa11.14□□□□□ -0.63
TTC28-203ENST00000442232 SLC13A3Q8WWT9 602 aa11.14□□□□□ -0.63
TTC28-203ENST00000442232 ATL1Q8WXF7 558 aa11.14□□□□□ -0.63
TTC28-203ENST00000442232 NR4A3Q92570 626 aa11.14□□□□□ -0.63
TTC28-203ENST00000442232 CERS2Q96G23 380 aa11.14□□□□□ -0.63
TTC28-203ENST00000442232 ZNF354BQ96LW1 612 aa11.14□□□□□ -0.63
TTC28-203ENST00000442232 ATG10Q9H0Y0 220 aa11.14□□□□□ -0.63
TTC28-203ENST00000442232 SYNPO2LQ9H987 977 aa11.14□□□□□ -0.63
TTC28-203ENST00000442232 ARL15Q9NXU5 204 aa11.14□□□□□ -0.63
TTC28-203ENST00000442232 SUCOQ9UBS9 1254 aaKnown RBP11.14□□□□□ -0.63
TTC28-203ENST00000442232 ADAMTS6Q9UKP5 1117 aa11.14□□□□□ -0.63
TTC28-203ENST00000442232 CORO1CQ9ULV4 474 aaPredicted RBP11.14□□□□□ -0.63
TTC28-203ENST00000442232 CACNA1DQ01668 2161 aa11.14□□□□□ -0.63
TTC28-203ENST00000442232 FEZF1A0PJY2 475 aa11.13□□□□□ -0.63
TTC28-203ENST00000442232 A8MUI8 341 aa11.13□□□□□ -0.63
TTC28-203ENST00000442232 SGK494L7N484 410 aa11.13□□□□□ -0.63
TTC28-203ENST00000442232 NDUFS4O43181 175 aa11.13□□□□□ -0.63
TTC28-203ENST00000442232 PRAMEF2O60811 474 aa11.13□□□□□ -0.63
TTC28-203ENST00000442232 RDH16O75452 317 aa11.13□□□□□ -0.63
TTC28-203ENST00000442232 MLYCDO95822 493 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms