RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 PLEKHN1Q494U1 663 aaPredicted RBP17.95■□□□□ 0.46
HMGB3P22-201ENST00000442010 PRR30Q53SZ7 412 aaPredicted RBP17.95■□□□□ 0.46
HMGB3P22-201ENST00000442010 TMEM214Q6NUQ4 689 aaKnown RBP17.95■□□□□ 0.46
HMGB3P22-201ENST00000442010 IGFL2Q6UWQ7 119 aa17.95■□□□□ 0.46
HMGB3P22-201ENST00000442010 MAATS1Q7Z4T9 603 aa17.95■□□□□ 0.46
HMGB3P22-201ENST00000442010 ZC3H7AQ8IWR0 971 aaKnown RBP17.95■□□□□ 0.46
HMGB3P22-201ENST00000442010 SHISA5Q8N114 240 aa17.95■□□□□ 0.46
HMGB3P22-201ENST00000442010 OR4K1Q8NGD4 311 aa17.95■□□□□ 0.46
HMGB3P22-201ENST00000442010 ANKRD7Q92527 254 aa17.95■□□□□ 0.46
HMGB3P22-201ENST00000442010 PYCR2Q96C36 320 aa17.95■□□□□ 0.46
HMGB3P22-201ENST00000442010 MACROD1Q9BQ69 325 aa17.95■□□□□ 0.46
HMGB3P22-201ENST00000442010 HAUS8Q9BT25 410 aa17.95■□□□□ 0.46
HMGB3P22-201ENST00000442010 IDSB3KWA1 339 aa17.94■□□□□ 0.46
HMGB3P22-201ENST00000442010 H0YIG0 161 aa17.94■□□□□ 0.46
HMGB3P22-201ENST00000442010 EIF3HO15372 352 aaKnown RBP eCLIP17.94■□□□□ 0.46
HMGB3P22-201ENST00000442010 NSA2O95478 260 aaKnown RBP17.94■□□□□ 0.46
HMGB3P22-201ENST00000442010 HPP00738 406 aa17.94■□□□□ 0.46
HMGB3P22-201ENST00000442010 C1QAP02745 245 aa17.94■□□□□ 0.46
HMGB3P22-201ENST00000442010 ANXA5P08758 320 aa17.94■□□□□ 0.46
HMGB3P22-201ENST00000442010 COX6A1P12074 109 aa17.94■□□□□ 0.46
HMGB3P22-201ENST00000442010 ACPPP15309 386 aa17.94■□□□□ 0.46
HMGB3P22-201ENST00000442010 SSTR1P30872 391 aa17.94■□□□□ 0.46
HMGB3P22-201ENST00000442010 CASQ1P31415 396 aa17.94■□□□□ 0.46
HMGB3P22-201ENST00000442010 MAT1AQ00266 395 aaKnown RBP17.94■□□□□ 0.46
HMGB3P22-201ENST00000442010 ZNF460Q14592 562 aa17.94■□□□□ 0.46
HMGB3P22-201ENST00000442010 CRB2Q5IJ48 1285 aa17.94■□□□□ 0.46
HMGB3P22-201ENST00000442010 Q6ZS92 163 aa17.94■□□□□ 0.46
HMGB3P22-201ENST00000442010 PRSS41Q7RTY9 318 aa17.94■□□□□ 0.46
HMGB3P22-201ENST00000442010 ATCAYQ86WG3 371 aa17.94■□□□□ 0.46
HMGB3P22-201ENST00000442010 CEP97Q8IW35 865 aa17.94■□□□□ 0.46
HMGB3P22-201ENST00000442010 PARP9Q8IXQ6 854 aa17.94■□□□□ 0.46
HMGB3P22-201ENST00000442010 GALNT11Q8NCW6 608 aa17.94■□□□□ 0.46
HMGB3P22-201ENST00000442010 OR9A4Q8NGU2 314 aa17.94■□□□□ 0.46
HMGB3P22-201ENST00000442010 ALKBH8Q96BT7 664 aaKnown RBP17.94■□□□□ 0.46
HMGB3P22-201ENST00000442010 C8orf44Q96CB5 159 aa17.94■□□□□ 0.46
HMGB3P22-201ENST00000442010 VPS50Q96JG6 964 aa17.94■□□□□ 0.46
HMGB3P22-201ENST00000442010 TRIM54Q9BYV2 358 aa17.94■□□□□ 0.46
HMGB3P22-201ENST00000442010 RHOJQ9H4E5 214 aa17.94■□□□□ 0.46
HMGB3P22-201ENST00000442010 SLAMF7Q9NQ25 335 aa17.94■□□□□ 0.46
HMGB3P22-201ENST00000442010 NSMCE4AQ9NXX6 385 aa17.94■□□□□ 0.46
HMGB3P22-201ENST00000442010 B3GNT3Q9Y2A9 372 aa17.94■□□□□ 0.46
HMGB3P22-201ENST00000442010 LOC102723996A0A087X1L8 192 aa17.93■□□□□ 0.46
HMGB3P22-201ENST00000442010 CDC7O00311 574 aa17.93■□□□□ 0.46
HMGB3P22-201ENST00000442010 MAP2K7O14733 419 aa17.93■□□□□ 0.46
HMGB3P22-201ENST00000442010 PIAS1O75925 651 aa17.93■□□□□ 0.46
HMGB3P22-201ENST00000442010 GUCA1CO95843 209 aa17.93■□□□□ 0.46
HMGB3P22-201ENST00000442010 UQCRFS1P47985 274 aa17.93■□□□□ 0.46
HMGB3P22-201ENST00000442010 EMP2P54851 167 aa17.93■□□□□ 0.46
HMGB3P22-201ENST00000442010 CALCOCO2Q13137 446 aa17.93■□□□□ 0.46
HMGB3P22-201ENST00000442010 UBAP2LQ14157 1087 aaKnown RBP17.93■□□□□ 0.46
HMGB3P22-201ENST00000442010 SYT10Q6XYQ8 523 aa17.93■□□□□ 0.46
HMGB3P22-201ENST00000442010 CYS1Q717R9 158 aa17.93■□□□□ 0.46
HMGB3P22-201ENST00000442010 ZNF572Q7Z3I7 529 aaPredicted RBP17.93■□□□□ 0.46
HMGB3P22-201ENST00000442010 NKAPQ8N5F7 415 aaKnown RBP17.93■□□□□ 0.46
HMGB3P22-201ENST00000442010 MFSD9Q8NBP5 474 aa17.93■□□□□ 0.46
HMGB3P22-201ENST00000442010 KCT2Q8NC54 265 aa17.93■□□□□ 0.46
HMGB3P22-201ENST00000442010 CAMKVQ8NCB2 501 aa17.93■□□□□ 0.46
HMGB3P22-201ENST00000442010 PYROXD1Q8WU10 500 aa17.93■□□□□ 0.46
HMGB3P22-201ENST00000442010 ANKRD49Q8WVL7 239 aa17.93■□□□□ 0.46
HMGB3P22-201ENST00000442010 ATL1Q8WXF7 558 aa17.93■□□□□ 0.46
HMGB3P22-201ENST00000442010 VPS39Q96JC1 886 aa17.93■□□□□ 0.46
HMGB3P22-201ENST00000442010 FAM129AQ9BZQ8 928 aa17.93■□□□□ 0.46
HMGB3P22-201ENST00000442010 LHPPQ9H008 270 aa17.93■□□□□ 0.46
HMGB3P22-201ENST00000442010 SAYSD1Q9NPB0 183 aa17.93■□□□□ 0.46
HMGB3P22-201ENST00000442010 CXorf49A8MYA2 514 aaPredicted RBP17.92■□□□□ 0.46
HMGB3P22-201ENST00000442010 BMP10O95393 424 aa17.92■□□□□ 0.46
HMGB3P22-201ENST00000442010 SAT1P21673 171 aa17.92■□□□□ 0.46
HMGB3P22-201ENST00000442010 AVPR1BP47901 424 aa17.92■□□□□ 0.46
HMGB3P22-201ENST00000442010 CDKL1Q00532 357 aa17.92■□□□□ 0.46
HMGB3P22-201ENST00000442010 AGAP7PQ5VUJ5 663 aa17.92■□□□□ 0.46
HMGB3P22-201ENST00000442010 TMEM205Q6UW68 189 aa17.92■□□□□ 0.46
HMGB3P22-201ENST00000442010 CAPN12Q6ZSI9 719 aa17.92■□□□□ 0.46
HMGB3P22-201ENST00000442010 NDUFAF7Q7L592 441 aa17.92■□□□□ 0.46
HMGB3P22-201ENST00000442010 ASPGQ86U10 573 aa17.92■□□□□ 0.46
HMGB3P22-201ENST00000442010 EFCAB3Q8N7B9 438 aa17.92■□□□□ 0.46
HMGB3P22-201ENST00000442010 SLC13A3Q8WWT9 602 aa17.92■□□□□ 0.46
HMGB3P22-201ENST00000442010 TM9SF4Q92544 642 aa17.92■□□□□ 0.46
HMGB3P22-201ENST00000442010 THOC3Q96J01 351 aaKnown RBP17.92■□□□□ 0.46
HMGB3P22-201ENST00000442010 AGAP4Q96P64 663 aa17.92■□□□□ 0.46
HMGB3P22-201ENST00000442010 YIPF2Q9BWQ6 316 aa17.92■□□□□ 0.46
HMGB3P22-201ENST00000442010 SPNS1Q9H2V7 528 aa17.92■□□□□ 0.46
HMGB3P22-201ENST00000442010 POPDC3Q9HBV1 291 aa17.92■□□□□ 0.46
HMGB3P22-201ENST00000442010 ZNF160Q9HCG1 818 aa17.92■□□□□ 0.46
HMGB3P22-201ENST00000442010 CSAG2Q9Y5P2 127 aa17.92■□□□□ 0.46
HMGB3P22-201ENST00000442010 ZGRF1Q86YA3 2104 aa17.92■□□□□ 0.46
HMGB3P22-201ENST00000442010 SVILO95425 2214 aa17.91■□□□□ 0.46
HMGB3P22-201ENST00000442010 IGHV1-45A0A0A0MS14 117 aa17.91■□□□□ 0.46
HMGB3P22-201ENST00000442010 TCRBV9S1A1TA0A576 114 aa17.91■□□□□ 0.46
HMGB3P22-201ENST00000442010 NPEPPSL1A6NEC2 478 aa17.91■□□□□ 0.46
HMGB3P22-201ENST00000442010 PCDH17O14917 1159 aa17.91■□□□□ 0.46
HMGB3P22-201ENST00000442010 VPS4BO75351 444 aa17.91■□□□□ 0.46
HMGB3P22-201ENST00000442010 IL1RNP18510 177 aa17.91■□□□□ 0.46
HMGB3P22-201ENST00000442010 GNLYP22749 145 aa17.91■□□□□ 0.46
HMGB3P22-201ENST00000442010 GRK3P35626 688 aa17.91■□□□□ 0.46
HMGB3P22-201ENST00000442010 CCR8P51685 355 aa17.91■□□□□ 0.46
HMGB3P22-201ENST00000442010 GPX6P59796 221 aa17.91■□□□□ 0.46
HMGB3P22-201ENST00000442010 MEF2AQ02078 507 aaPredicted RBP17.91■□□□□ 0.46
HMGB3P22-201ENST00000442010 TRADDQ15628 312 aa17.91■□□□□ 0.46
HMGB3P22-201ENST00000442010 CATSPEREQ5SY80 951 aa17.91■□□□□ 0.46
HMGB3P22-201ENST00000442010 CUZD1Q86UP6 607 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms