RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 PARVAQ9NVD7 372 aa6.25□□□□□ -1.41
HDAC6-210ENST00000441703 CRNNQ9UBG3 495 aaPredicted RBP6.25□□□□□ -1.41
HDAC6-210ENST00000441703 DCDC2Q9UHG0 476 aa6.25□□□□□ -1.41
HDAC6-210ENST00000441703 NTNG1Q9Y2I2 539 aa6.25□□□□□ -1.41
HDAC6-210ENST00000441703 PCDHB4Q9Y5E5 795 aa6.25□□□□□ -1.41
HDAC6-210ENST00000441703 ZGRF1Q86YA3 2104 aa6.25□□□□□ -1.41
HDAC6-210ENST00000441703 GOLGA8QA0A0J9YX86 632 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 LOC100653049A0A140TA62 436 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 A0A1W2PPW3 197 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 TCRBV3S1A0A5B6 114 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 FAM172BPA6NC97 362 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 GOLGA8OA6NCC3 632 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 TMEM191CA6NGB0 347 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 FAM159BA6NKW6 160 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 KIAA1324LA8MWY0 1029 aaPredicted RBP6.24□□□□□ -1.41
HDAC6-210ENST00000441703 CLDN25C9JDP6 229 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 GOLGA8NF8WBI6 632 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 E2F3O00716 465 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 ACOX3O15254 700 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 GLRA3O75311 464 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 H2AFYO75367 372 aaKnown RBP6.24□□□□□ -1.41
HDAC6-210ENST00000441703 DAB1O75553 588 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 JRKO75564 520 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 KRT34O76011 436 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 POP4O95707 220 aaKnown RBP6.24□□□□□ -1.41
HDAC6-210ENST00000441703 CHEK2O96017 543 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 KRT6AP02538 564 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 KRT6BP04259 564 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 HOXC4P09017 264 aaPredicted RBP6.24□□□□□ -1.41
HDAC6-210ENST00000441703 NCF2P19878 526 aaPredicted RBP6.24□□□□□ -1.41
HDAC6-210ENST00000441703 ENDOUP21128 410 aaKnown RBP6.24□□□□□ -1.41
HDAC6-210ENST00000441703 AK4P27144 223 aaPredicted RBP6.24□□□□□ -1.41
HDAC6-210ENST00000441703 PIK3R1P27986 724 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 ETFBP38117 255 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 MAGEA6P43360 314 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 GNPDA1P46926 289 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 KRT6CP48668 564 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 MS4A2Q01362 244 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 GNA12Q03113 381 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 RAD51Q06609 339 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 SELENBP1Q13228 472 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 NME3Q13232 169 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 NAB1Q13506 487 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 IL10RAQ13651 578 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 PIGHQ14442 188 aaPredicted RBP6.24□□□□□ -1.41
HDAC6-210ENST00000441703 ZNF235Q14590 738 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 KCNJ11Q14654 390 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 TAF5Q15542 800 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 BRMS1LQ5PSV4 323 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 C6orf10Q5SRN2 563 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 INTS11Q5TA45 600 aaKnown RBP6.24□□□□□ -1.41
HDAC6-210ENST00000441703 OTUD1Q5VV17 481 aaPredicted RBP6.24□□□□□ -1.41
HDAC6-210ENST00000441703 DENND1BQ6P3S1 775 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 TTC33Q6PID6 262 aaPredicted RBP6.24□□□□□ -1.41
HDAC6-210ENST00000441703 GDPD4Q6W3E5 623 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 MED25Q71SY5 747 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 VASH1Q7L8A9 365 aaPredicted RBP6.24□□□□□ -1.41
HDAC6-210ENST00000441703 MAVSQ7Z434 540 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 POLNQ7Z5Q5 900 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 PPP1R3BQ86XI6 285 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 LACC1Q8IV20 430 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 NAGSQ8N159 534 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 NDUFAF2Q8N183 169 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 PPM1NQ8N819 430 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 NIPA2Q8N8Q9 360 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 SNX31Q8N9S9 440 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 GOLM1Q8NBJ4 401 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 MCUQ8NE86 351 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 BHLHE22Q8NFJ8 381 aaPredicted RBP6.24□□□□□ -1.41
HDAC6-210ENST00000441703 ANGPTL6Q8NI99 470 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 RELTQ969Z4 430 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 FUBP1Q96AE4 644 aaKnown RBP6.24□□□□□ -1.41
HDAC6-210ENST00000441703 VMP1Q96GC9 406 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 SORT1Q99523 831 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 BARD1Q99728 777 aaKnown RBP6.24□□□□□ -1.41
HDAC6-210ENST00000441703 FAM118BQ9BPY3 351 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 BCL7BQ9BQE9 202 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 TMEM121Q9BTD3 319 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 HOXD1Q9GZZ0 328 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 KLHL25Q9H0H3 589 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 SIK2Q9H0K1 926 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 WDR26Q9H7D7 661 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 EFCAB1Q9HAE3 211 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 MRGBPQ9NV56 204 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 PNPOQ9NVS9 261 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 MPP6Q9NZW5 540 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 MARCOQ9UEW3 520 aaPredicted RBP6.24□□□□□ -1.41
HDAC6-210ENST00000441703 DAPK2Q9UIK4 370 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 PSME2Q9UL46 239 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 FARSAQ9Y285 508 aaKnown RBP6.24□□□□□ -1.41
HDAC6-210ENST00000441703 TCAF1Q9Y4C2 921 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 PCDHGA10Q9Y5H3 936 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 CORINQ9Y5Q5 1042 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 TACC2O95359 2948 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 FER1L5A0AVI2 2057 aa6.24□□□□□ -1.41
HDAC6-210ENST00000441703 RTTNQ86VV8 2226 aa6.23□□□□□ -1.41
HDAC6-210ENST00000441703 TRBV23OR9-2A0A075B6M9 112 aa6.23□□□□□ -1.41
HDAC6-210ENST00000441703 TRGV8A0A0C4DH27 118 aa6.23□□□□□ -1.41
HDAC6-210ENST00000441703 TCRBV7S3A2A0A539 114 aa6.23□□□□□ -1.41
HDAC6-210ENST00000441703 TSPAN11A1L157 253 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms