RNA–Protein interactions for RNA: ENST00000441560.6

ATL1-202, Transcript of atlastin GTPase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATL1, Length 2,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-202ENST00000441560 HTR3DQ70Z44 454 aa9.54□□□□□ -0.88
ATL1-202ENST00000441560 EIF3MQ7L2H7 374 aaKnown RBP9.54□□□□□ -0.88
ATL1-202ENST00000441560 LRRC17Q8N6Y2 441 aa9.54□□□□□ -0.88
ATL1-202ENST00000441560 PPHLN1Q8NEY8 458 aaKnown RBP9.54□□□□□ -0.88
ATL1-202ENST00000441560 PHOSPHO2Q8TCD6 241 aa9.54□□□□□ -0.88
ATL1-202ENST00000441560 ZNF419Q96HQ0 510 aaPredicted RBP9.54□□□□□ -0.88
ATL1-202ENST00000441560 PYURFQ96I23 114 aa9.54□□□□□ -0.88
ATL1-202ENST00000441560 WDFY2Q96P53 400 aa9.54□□□□□ -0.88
ATL1-202ENST00000441560 PELOQ9BRX2 385 aaKnown RBP9.54□□□□□ -0.88
ATL1-202ENST00000441560 APOL5Q9BWW9 433 aa9.54□□□□□ -0.88
ATL1-202ENST00000441560 PORCNQ9H237 461 aa9.54□□□□□ -0.88
ATL1-202ENST00000441560 ATXN3LQ9H3M9 355 aa9.54□□□□□ -0.88
ATL1-202ENST00000441560 ZNF768Q9H5H4 540 aaKnown RBP9.54□□□□□ -0.88
ATL1-202ENST00000441560 QTRT2Q9H974 415 aaKnown RBP9.54□□□□□ -0.88
ATL1-202ENST00000441560 ZFP64Q9NPA5 681 aa9.54□□□□□ -0.88
ATL1-202ENST00000441560 CUEDC1Q9NWM3 386 aaPredicted RBP9.54□□□□□ -0.88
ATL1-202ENST00000441560 ADAM30Q9UKF2 790 aa9.54□□□□□ -0.88
ATL1-202ENST00000441560 SESN1Q9Y6P5 492 aa9.54□□□□□ -0.88
ATL1-202ENST00000441560 SLC35F4A4IF30 521 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 M0R129 80 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 GFRA2O00451 464 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 LYRM1O43325 122 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 GATCO43716 136 aaKnown RBP9.53□□□□□ -0.88
ATL1-202ENST00000441560 LZTS3O60299 673 aaPredicted RBP9.53□□□□□ -0.88
ATL1-202ENST00000441560 CELF2O95319 508 aaKnown RBP9.53□□□□□ -0.88
ATL1-202ENST00000441560 CBX7O95931 251 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 HRGP04196 525 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 CYP17A1P05093 508 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 APEX1P27695 318 aaKnown RBP9.53□□□□□ -0.88
ATL1-202ENST00000441560 SOX3P41225 446 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 CDKN2DP55273 166 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 CLDN20P56880 219 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 HSD17B7P56937 341 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 SSX1Q16384 188 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 FAM180BQ6P0A1 224 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 ATRAIDQ6UW56 229 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 RTL4Q6ZR62 310 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 FAM92BQ6ZTR7 304 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 BRINP3Q76B58 766 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 OTOP2Q7RTS6 562 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 STPG2Q8N412 459 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 MS4A15Q8N5U1 240 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 GPR152Q8TDT2 470 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 POF1BQ8WVV4 589 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 BTN2A2Q8WVV5 523 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 FUBP1Q96AE4 644 aaKnown RBP9.53□□□□□ -0.88
ATL1-202ENST00000441560 TSPAN17Q96FV3 270 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 EXOC2Q96KP1 924 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 CCM2Q9BSQ5 444 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 RBCK1Q9BYM8 510 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 MED28Q9H204 178 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 MIXL1Q9H2W2 232 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 RC3H2Q9HBD1 1191 aaKnown RBP9.53□□□□□ -0.88
ATL1-202ENST00000441560 ZDHHC4Q9NPG8 344 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 KLHL42Q9P2K6 505 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 USP21Q9UK80 565 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 CBX4O00257 560 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 CD3EAPO15446 510 aaKnown RBP9.53□□□□□ -0.88
ATL1-202ENST00000441560 CHP2O43745 196 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 RPS17P08708 135 aaKnown RBP9.53□□□□□ -0.88
ATL1-202ENST00000441560 G6PDP11413 515 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 LHCGRP22888 699 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 LCP2Q13094 533 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 PGM5Q15124 567 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 SMAD2Q15796 467 aaKnown RBP9.53□□□□□ -0.88
ATL1-202ENST00000441560 C6orf136Q5SQH8 315 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 FAM171A1Q5VUB5 890 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 ZNF425Q6IV72 752 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 ZNF605Q86T29 641 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 Q8N402 240 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 C1orf127Q8N9H9 656 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.53□□□□□ -0.88
ATL1-202ENST00000441560 C12orf42Q96LP6 360 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 ZBTB18Q99592 522 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 CINPQ9BW66 212 aaPredicted RBP9.53□□□□□ -0.88
ATL1-202ENST00000441560 CD244Q9BZW8 370 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 GABARAPL1Q9H0R8 117 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 MAGIXQ9H6Y5 334 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 STARD7Q9NQZ5 370 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 KCMF1Q9P0J7 381 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 CTSFQ9UBX1 484 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 MLXQ9UH92 298 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 GLS2Q9UI32 602 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 FZD10Q9ULW2 581 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 NEUROG3Q9Y4Z2 214 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 MAB21L2Q9Y586 359 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 SIPA1L1O43166 1804 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 PRAMEF33A0A0G2JMD5 474 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 MROH6A6NGR9 719 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 YDJCA8MPS7 323 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 STMND1H3BQB6 276 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 TEX46H3BTG2 121 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 INPPL1O15357 1258 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 PRAMEF10O60809 474 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 NFICP08651 508 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 PRR35P0CG20 571 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 CXCL8P10145 99 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 SLC2A4P14672 509 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 PTPRAP18433 802 aa9.53□□□□□ -0.88
ATL1-202ENST00000441560 DNAJA1P31689 397 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms