RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 IRF3Q14653 427 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 LRIF1Q5T3J3 769 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 ADAMTSL2Q86TH1 951 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 PGBD5Q8N414 524 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 OR4F6Q8NGB9 312 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 ZFAND1Q8TCF1 268 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 FYTTD1Q96QD9 318 aaKnown RBP11.52□□□□□ -0.57
LTBR-203ENST00000441074 KCNS3Q9BQ31 491 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 GABARAPL3Q9BY60 117 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 CWH43Q9H720 699 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 SLC6A13Q9NSD5 602 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 TOR4AQ9NXH8 423 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 DOCK4Q8N1I0 1966 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 A0A0X1KG70 313 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 OR7A17O14581 309 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 SYN3O14994 580 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 RAMP2O60895 175 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 SEMG1P04279 462 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 ADORA3P0DMS8 318 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 MYCLP1P12525 358 aaPredicted RBP11.52□□□□□ -0.57
LTBR-203ENST00000441074 ERP29P30040 261 aaKnown RBP11.52□□□□□ -0.57
LTBR-203ENST00000441074 YBEYP58557 167 aaPredicted RBP11.52□□□□□ -0.57
LTBR-203ENST00000441074 ZNF235Q14590 738 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 PCBP2Q15366 365 aaKnown RBP eCLIP11.52□□□□□ -0.572e-7■■□□□ 12.6
LTBR-203ENST00000441074 TIMM50Q3ZCQ8 353 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 MS4A13Q5J8X5 152 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 CACHD1Q5VU97 1274 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 FBXO22Q8NEZ5 403 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 OR5H6Q8NGV6 325 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 CDKN2AIPNLQ96HQ2 116 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 CITED4Q96RK1 184 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 MCCC1Q96RQ3 725 aaPredicted RBP11.52□□□□□ -0.57
LTBR-203ENST00000441074 COQ7Q99807 217 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 SEMA3CQ99985 751 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 ROGDIQ9GZN7 287 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 KCNH6Q9H252 994 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 FBXO44Q9H4M3 255 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 CCSER2Q9H7U1 834 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 ATP13A2Q9NQ11 1180 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 OLA1Q9NTK5 396 aaKnown RBP11.52□□□□□ -0.57
LTBR-203ENST00000441074 DNMT3LQ9UJW3 386 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 MAN2B2Q9Y2E5 1009 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 B8ZZF3 427 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 hCG_2039718K7EN88 272 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 RGS14O43566 566 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 ZNF780AO75290 641 aaPredicted RBP11.51□□□□□ -0.57
LTBR-203ENST00000441074 VPS26AO75436 327 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 NDUFS3O75489 264 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 CNPP09543 421 aaKnown RBP11.51□□□□□ -0.57
LTBR-203ENST00000441074 ATF6P18850 670 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 CD9P21926 228 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 MLLT3P42568 568 aaPredicted RBP11.51□□□□□ -0.57
LTBR-203ENST00000441074 SERINC3Q13530 473 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 ALFQ53S48 1182 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 C19orf48Q6RUI8 117 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 IDO2Q6ZQW0 420 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 GOLGA7Q7Z5G4 137 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 ZSWIM9Q86XI8 627 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 RNF130Q86XS8 419 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 TMEM132CQ8N3T6 1108 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 LIX1Q8N485 282 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 CARNMT1Q8N4J0 409 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 KRTCAP2Q8N6L1 136 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 NATD1Q8N6N6 113 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 TTC16Q8NEE8 873 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 ZNF717Q9BY31 904 aaPredicted RBP11.51□□□□□ -0.57
LTBR-203ENST00000441074 REEP1Q9H902 201 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 SMURF1Q9HCE7 757 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 NLE1Q9NVX2 485 aaPredicted RBP11.51□□□□□ -0.57
LTBR-203ENST00000441074 SIRT5Q9NXA8 310 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 ASIC5Q9NY37 505 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 NUDT4Q9NZJ9 180 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 NUFIP1Q9UHK0 495 aaKnown RBP11.51□□□□□ -0.57
LTBR-203ENST00000441074 MUTYHQ9UIF7 546 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 KLHL20Q9Y2M5 609 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 SPEF1Q9Y4P9 236 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 TNPO3Q9Y5L0 923 aaKnown RBP11.51□□□□□ -0.57
LTBR-203ENST00000441074 PLXNA3P51805 1871 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 C12orf71A8MTZ7 269 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 SHOXO15266 292 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 ARHGEF9O43307 516 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 DIRAS1O95057 198 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 OTCP00480 354 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 PTHP01270 115 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 VIPP01282 170 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 STSP08842 583 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 GGT2P36268 569 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 MAPKAPK2P49137 400 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 IL2P60568 153 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 EIF4HQ15056 248 aaKnown RBP11.51□□□□□ -0.57
LTBR-203ENST00000441074 TTLL9Q3SXZ7 439 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 CDONQ4KMG0 1287 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 INO80DQ53TQ3 878 aaPredicted RBP11.51□□□□□ -0.57
LTBR-203ENST00000441074 ALG1LQ6GMV1 187 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 PLCZ1Q86YW0 608 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 PGBD3Q8N328 593 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 EEF1AKMT1Q8WVE0 214 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 SNAPC3Q92966 411 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 TNKS2Q9H2K2 1166 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 THUMPD1Q9NXG2 353 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms