RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 FOXS1O43638 330 aa22.48■■□□□ 1.19
VARS-217ENST00000440048 NCF1P14598 390 aaPredicted RBP22.48■■□□□ 1.19
VARS-217ENST00000440048 CCL11P51671 97 aa22.48■■□□□ 1.19
VARS-217ENST00000440048 SNRPNP63162 240 aaKnown RBP22.48■■□□□ 1.19
VARS-217ENST00000440048 DLG1Q12959 904 aa22.48■■□□□ 1.19
VARS-217ENST00000440048 BMPR2Q13873 1038 aa22.48■■□□□ 1.19
VARS-217ENST00000440048 FAM53BQ14153 422 aa22.48■■□□□ 1.19
VARS-217ENST00000440048 NDUFA9Q16795 377 aa22.48■■□□□ 1.19
VARS-217ENST00000440048 SHISA6Q6ZSJ9 500 aa22.48■■□□□ 1.19
VARS-217ENST00000440048 MED25Q71SY5 747 aa22.48■■□□□ 1.19
VARS-217ENST00000440048 KLHDC8AQ8IYD2 350 aa22.48■■□□□ 1.19
VARS-217ENST00000440048 MFSD9Q8NBP5 474 aa22.48■■□□□ 1.19
VARS-217ENST00000440048 CAMKVQ8NCB2 501 aa22.48■■□□□ 1.19
VARS-217ENST00000440048 KIAA1191Q96A73 305 aa22.48■■□□□ 1.19
VARS-217ENST00000440048 SARGQ9BW04 601 aa22.48■■□□□ 1.19
VARS-217ENST00000440048 DRC3Q9H069 523 aa22.48■■□□□ 1.19
VARS-217ENST00000440048 NFU1Q9UMS0 254 aa22.48■■□□□ 1.19
VARS-217ENST00000440048 TP53TG5Q9Y2B4 290 aa22.48■■□□□ 1.19
VARS-217ENST00000440048 FLNBO75369 2602 aaKnown RBP22.47■■□□□ 1.19
VARS-217ENST00000440048 NUP210LQ5VU65 1888 aa22.47■■□□□ 1.19
VARS-217ENST00000440048 TNRC6AQ8NDV7 1962 aaKnown RBP22.47■■□□□ 1.19
VARS-217ENST00000440048 A0A0A6YYC8 382 aaPredicted RBP22.47■■□□□ 1.19
VARS-217ENST00000440048 TRBC2A0A5B9 178 aa22.47■■□□□ 1.19
VARS-217ENST00000440048 I3L1I5 382 aaPredicted RBP22.47■■□□□ 1.19
VARS-217ENST00000440048 K7EM74 188 aa22.47■■□□□ 1.19
VARS-217ENST00000440048 RHOXF2BP0C7M4 288 aa22.47■■□□□ 1.19
VARS-217ENST00000440048 SLC26A3P40879 764 aa22.47■■□□□ 1.19
VARS-217ENST00000440048 GDF5P43026 501 aa22.47■■□□□ 1.19
VARS-217ENST00000440048 SLC6A12P48065 614 aa22.47■■□□□ 1.19
VARS-217ENST00000440048 OCA2Q04671 838 aa22.47■■□□□ 1.19
VARS-217ENST00000440048 DSG2Q14126 1118 aa22.47■■□□□ 1.19
VARS-217ENST00000440048 LACTB2Q53H82 288 aaPredicted RBP22.47■■□□□ 1.19
VARS-217ENST00000440048 TBC1D1Q86TI0 1168 aaPredicted RBP22.47■■□□□ 1.19
VARS-217ENST00000440048 ASPGQ86U10 573 aa22.47■■□□□ 1.19
VARS-217ENST00000440048 IFT20Q8IY31 132 aa22.47■■□□□ 1.19
VARS-217ENST00000440048 TMEM102Q8N9M5 508 aaPredicted RBP22.47■■□□□ 1.19
VARS-217ENST00000440048 LRRN4CLQ8ND94 238 aa22.47■■□□□ 1.19
VARS-217ENST00000440048 ZNF740Q8NDX6 193 aa22.47■■□□□ 1.19
VARS-217ENST00000440048 STT3BQ8TCJ2 826 aa22.47■■□□□ 1.19
VARS-217ENST00000440048 MMABQ96EY8 250 aaPredicted RBP22.47■■□□□ 1.19
VARS-217ENST00000440048 RHOXF2Q9BQY4 288 aa22.47■■□□□ 1.19
VARS-217ENST00000440048 SPNS1Q9H2V7 528 aa22.47■■□□□ 1.19
VARS-217ENST00000440048 PELI2Q9HAT8 420 aa22.47■■□□□ 1.19
VARS-217ENST00000440048 ZNF282Q9UDV7 671 aaPredicted RBP22.47■■□□□ 1.19
VARS-217ENST00000440048 KCNE2Q9Y6J6 123 aa22.47■■□□□ 1.19
VARS-217ENST00000440048 IGLV3-12A0A075B6K2 115 aa22.46■■□□□ 1.19
VARS-217ENST00000440048 PEX12O00623 359 aa22.46■■□□□ 1.19
VARS-217ENST00000440048 TAPBPO15533 448 aa22.46■■□□□ 1.19
VARS-217ENST00000440048 PRPF4O43172 522 aaKnown RBP eCLIP22.46■■□□□ 1.19
VARS-217ENST00000440048 OR1F1O43749 312 aa22.46■■□□□ 1.19
VARS-217ENST00000440048 WDR47O94967 919 aa22.46■■□□□ 1.19
VARS-217ENST00000440048 ZGLP1P0C6A0 271 aa22.46■■□□□ 1.19
VARS-217ENST00000440048 NR1D1P20393 614 aa22.46■■□□□ 1.19
VARS-217ENST00000440048 MMP11P24347 488 aa22.46■■□□□ 1.19
VARS-217ENST00000440048 KCNC1P48547 511 aa22.46■■□□□ 1.19
VARS-217ENST00000440048 RRADP55042 308 aa22.46■■□□□ 1.19
VARS-217ENST00000440048 CDKL4Q5MAI5 379 aa22.46■■□□□ 1.19
VARS-217ENST00000440048 TMEM214Q6NUQ4 689 aaKnown RBP22.46■■□□□ 1.19
VARS-217ENST00000440048 TCTN3Q6NUS6 607 aa22.46■■□□□ 1.19
VARS-217ENST00000440048 NXPE4Q6UWF7 544 aa22.46■■□□□ 1.19
VARS-217ENST00000440048 PTRH1Q86Y79 214 aaKnown RBP22.46■■□□□ 1.19
VARS-217ENST00000440048 TCAIMQ8N3R3 496 aa22.46■■□□□ 1.19
VARS-217ENST00000440048 AMER3Q8N944 861 aa22.46■■□□□ 1.19
VARS-217ENST00000440048 SLC13A3Q8WWT9 602 aa22.46■■□□□ 1.19
VARS-217ENST00000440048 MIEF2Q96C03 454 aa22.46■■□□□ 1.19
VARS-217ENST00000440048 TMEM79Q9BSE2 394 aa22.46■■□□□ 1.19
VARS-217ENST00000440048 ALG9Q9H6U8 611 aa22.46■■□□□ 1.19
VARS-217ENST00000440048 NMRAL1Q9HBL8 299 aa22.46■■□□□ 1.19
VARS-217ENST00000440048 IGSF5Q9NSI5 407 aa22.46■■□□□ 1.19
VARS-217ENST00000440048 P4HTMQ9NXG6 502 aa22.46■■□□□ 1.19
VARS-217ENST00000440048 TRPC4Q9UBN4 977 aa22.46■■□□□ 1.19
VARS-217ENST00000440048 RNF112Q9ULX5 631 aa22.46■■□□□ 1.19
VARS-217ENST00000440048 ACOT9Q9Y305 439 aa22.46■■□□□ 1.19
VARS-217ENST00000440048 FFAR3O14843 346 aa22.45■■□□□ 1.18
VARS-217ENST00000440048 GPR42O15529 346 aa22.45■■□□□ 1.18
VARS-217ENST00000440048 SLC28A2O43868 658 aa22.45■■□□□ 1.18
VARS-217ENST00000440048 LTA4HP09960 611 aaKnown RBP22.45■■□□□ 1.18
VARS-217ENST00000440048 TFEBP19484 476 aa22.45■■□□□ 1.18
VARS-217ENST00000440048 GGT5P36269 586 aa22.45■■□□□ 1.18
VARS-217ENST00000440048 CSRP3P50461 194 aa22.45■■□□□ 1.18
VARS-217ENST00000440048 REEP5Q00765 189 aa22.45■■□□□ 1.18
VARS-217ENST00000440048 KLC1Q07866 573 aa22.45■■□□□ 1.18
VARS-217ENST00000440048 VWA2Q5GFL6 755 aa22.45■■□□□ 1.18
VARS-217ENST00000440048 TMPRSS11BQ86T26 416 aa22.45■■□□□ 1.18
VARS-217ENST00000440048 ISCA2Q86U28 154 aa22.45■■□□□ 1.18
VARS-217ENST00000440048 PRSS58Q8IYP2 241 aa22.45■■□□□ 1.18
VARS-217ENST00000440048 TBC1D19Q8N5T2 526 aa22.45■■□□□ 1.18
VARS-217ENST00000440048 KCT2Q8NC54 265 aa22.45■■□□□ 1.18
VARS-217ENST00000440048 SLC44A1Q8WWI5 657 aa22.45■■□□□ 1.18
VARS-217ENST00000440048 NACC2Q96BF6 587 aa22.45■■□□□ 1.18
VARS-217ENST00000440048 YIPF2Q9BWQ6 316 aa22.45■■□□□ 1.18
VARS-217ENST00000440048 SNX15Q9NRS6 342 aa22.45■■□□□ 1.18
VARS-217ENST00000440048 WWOXQ9NZC7 414 aa22.45■■□□□ 1.18
VARS-217ENST00000440048 CD274Q9NZQ7 290 aa22.45■■□□□ 1.18
VARS-217ENST00000440048 CEACAM4O75871 244 aa22.44■■□□□ 1.18
VARS-217ENST00000440048 C2P06681 752 aa22.44■■□□□ 1.18
VARS-217ENST00000440048 SCTRP47872 440 aa22.44■■□□□ 1.18
VARS-217ENST00000440048 AVPR1BP47901 424 aa22.44■■□□□ 1.18
VARS-217ENST00000440048 FBXO48Q5FWF7 155 aa22.44■■□□□ 1.18
VARS-217ENST00000440048 DCAF10Q5QP82 559 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms