RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 KRT87PA6NCN2 255 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 TRABD2BA6NFA1 517 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 NEMP2A6NFY4 417 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 SUPT3HB4E1H0 165 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 FXYD1O00168 92 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 E2F3O00716 465 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 PRMT5O14744 637 aaPredicted RBP4.6□□□□□ -1.67
EDEM3-203ENST00000439962 PIP5K1BO14986 540 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 KPNA5O15131 536 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 STX7O15400 261 aaKnown RBP4.6□□□□□ -1.67
EDEM3-203ENST00000439962 FLRT2O43155 660 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 HTRA2O43464 458 aaPredicted RBP4.6□□□□□ -1.67
EDEM3-203ENST00000439962 MRPS14O60783 128 aaKnown RBP4.6□□□□□ -1.67
EDEM3-203ENST00000439962 SUPT3HO75486 399 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 CRCPO75575 148 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 SLC22A3O75751 556 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 TFAP2AP05549 437 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 ADRB1P08588 477 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 BPIP17213 487 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 SLC6A2P23975 617 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 EEF1DP29692 281 aaKnown RBP4.6□□□□□ -1.67
EDEM3-203ENST00000439962 GGT5P36269 586 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 C21orf58P58505 322 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 PCDH1Q08174 1060 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 PRKG2Q13237 762 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 SP140Q13342 867 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 TSTA3Q13630 321 aaPredicted RBP4.6□□□□□ -1.67
EDEM3-203ENST00000439962 SEMA3AQ14563 771 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 RPS6KA2Q15349 733 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 CHRNA6Q15825 494 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 TTLL9Q3SXZ7 439 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 NHSL2Q5HYW2 709 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 C10orf62Q5T681 223 aaPredicted RBP4.6□□□□□ -1.67
EDEM3-203ENST00000439962 LINC00299Q6ZSB3 139 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 SNX20Q7Z614 316 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 RABEPKQ7Z6M1 372 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 B3GNT8Q7Z7M8 397 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 FAM129CQ86XR2 697 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 SLC15A3Q8IY34 581 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 IFI44Q8TCB0 444 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 CD200R1Q8TD46 325 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 TFAP2CQ92754 450 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 RAB7BQ96AH8 199 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 TMEM125Q96AQ2 219 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 SLCO4A1Q96BD0 722 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 LRIG1Q96JA1 1093 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 WDR92Q96MX6 357 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 BCL7BQ9BQE9 202 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 NTMT1Q9BV86 223 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 SPATA9Q9BWV2 254 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 GORASP2Q9H8Y8 452 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 CLK4Q9HAZ1 481 aaKnown RBP4.6□□□□□ -1.67
EDEM3-203ENST00000439962 SARS2Q9NP81 518 aaKnown RBP4.6□□□□□ -1.67
EDEM3-203ENST00000439962 OLAHQ9NV23 265 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 DDX18Q9NVP1 670 aaKnown RBP4.6□□□□□ -1.67
EDEM3-203ENST00000439962 CCDC167Q9P0B6 97 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 IL17CQ9P0M4 197 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 MAP10Q9P2G4 905 aa4.6□□□□□ -1.67
EDEM3-203ENST00000439962 TCRBV5S2A0A599 114 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 ANKRD33BA6NCL7 494 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 CCDC154A6NI56 674 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 TMEM233B4DJY2 109 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 H3BM21 787 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 QSOX1O00391 747 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 NME4O00746 187 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 CLGNO14967 610 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 RGS14O43566 566 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 PRMT3O60678 531 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 UGDHO60701 494 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 FKBP9O95302 570 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 PRAMEF1O95521 474 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 TNFP01375 233 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 CSF2P04141 144 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 EBLN1P0CF75 366 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 MPC1LP0DKB6 136 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 CDH1P12830 882 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 ITIH1P19827 911 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 NFKBIAP25963 317 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 GMPRP36959 345 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 CCR10P46092 362 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 SEPHS1P49903 392 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 CDK9P50750 372 aaKnown RBP4.59□□□□□ -1.67
EDEM3-203ENST00000439962 CLCN7P51798 805 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 POLR2JP52435 117 aaKnown RBP4.59□□□□□ -1.67
EDEM3-203ENST00000439962 SLC7A2P52569 658 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 PGGT1BP53609 377 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 OR1D5P58170 312 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 MYBPC1Q00872 1141 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 LRRC74AQ0VAA2 488 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 ILF3Q12906 894 aaKnown RBP eCLIP4.59□□□□□ -1.67
EDEM3-203ENST00000439962 ABRQ12979 859 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 PFKFB4Q16877 469 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 ATP6AP1LQ52LC2 224 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 DUS1LQ6P1R4 473 aaKnown RBP4.59□□□□□ -1.67
EDEM3-203ENST00000439962 PAQR3Q6TCH7 311 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 DPPA4Q7L190 304 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 TRIM46Q7Z4K8 759 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 ABI3BPQ7Z7G0 1075 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 ERI1Q8IV48 349 aaKnown RBP4.59□□□□□ -1.67
EDEM3-203ENST00000439962 CROCCP3Q8IVE0 287 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms