RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 FKBP10Q96AY3 582 aa11.27□□□□□ -0.61
HSPG2-206ENST00000439717 TM4SF19Q96DZ7 209 aa11.27□□□□□ -0.61
HSPG2-206ENST00000439717 CATSPER2Q96P56 530 aa11.27□□□□□ -0.61
HSPG2-206ENST00000439717 MRPL57Q9BQC6 102 aaKnown RBP11.27□□□□□ -0.61
HSPG2-206ENST00000439717 PITHD1Q9GZP4 211 aaPredicted RBP11.27□□□□□ -0.61
HSPG2-206ENST00000439717 EHD1Q9H4M9 534 aa11.27□□□□□ -0.61
HSPG2-206ENST00000439717 ACTL8Q9H568 366 aa11.27□□□□□ -0.61
HSPG2-206ENST00000439717 SYNPO2LQ9H987 977 aa11.27□□□□□ -0.61
HSPG2-206ENST00000439717 IFT80Q9P2H3 777 aaPredicted RBP11.27□□□□□ -0.61
HSPG2-206ENST00000439717 NDOR1Q9UHB4 597 aa11.27□□□□□ -0.61
HSPG2-206ENST00000439717 GPN3Q9UHW5 284 aaPredicted RBP11.27□□□□□ -0.61
HSPG2-206ENST00000439717 CDC14AQ9UNH5 594 aa11.27□□□□□ -0.61
HSPG2-206ENST00000439717 RUVBL1Q9Y265 456 aaKnown RBP11.27□□□□□ -0.61
HSPG2-206ENST00000439717 PADI2Q9Y2J8 665 aa11.27□□□□□ -0.61
HSPG2-206ENST00000439717 ITPR1Q14643 2758 aa11.26□□□□□ -0.61
HSPG2-206ENST00000439717 K7EPI3 171 aa11.26□□□□□ -0.61
HSPG2-206ENST00000439717 PRPF4O43172 522 aaKnown RBP eCLIP11.26□□□□□ -0.61
HSPG2-206ENST00000439717 OR1F1O43749 312 aa11.26□□□□□ -0.61
HSPG2-206ENST00000439717 LCMT2O60294 686 aaKnown RBP11.26□□□□□ -0.61
HSPG2-206ENST00000439717 CDH16O75309 829 aa11.26□□□□□ -0.61
HSPG2-206ENST00000439717 ALBP02768 609 aa11.26□□□□□ -0.61
HSPG2-206ENST00000439717 GSTA1P08263 222 aa11.26□□□□□ -0.61
HSPG2-206ENST00000439717 SLC35G6P0C7Q6 338 aa11.26□□□□□ -0.61
HSPG2-206ENST00000439717 GSTM2P28161 218 aa11.26□□□□□ -0.61
HSPG2-206ENST00000439717 AHRP35869 848 aa11.26□□□□□ -0.61
HSPG2-206ENST00000439717 SCTRP47872 440 aa11.26□□□□□ -0.61
HSPG2-206ENST00000439717 CDC20Q12834 499 aa11.26□□□□□ -0.61
HSPG2-206ENST00000439717 PWP1Q13610 501 aa11.26□□□□□ -0.61
HSPG2-206ENST00000439717 FAM53BQ14153 422 aa11.26□□□□□ -0.61
HSPG2-206ENST00000439717 NAA30Q147X3 362 aaPredicted RBP11.26□□□□□ -0.61
HSPG2-206ENST00000439717 SETDB1Q15047 1291 aa11.26□□□□□ -0.61
HSPG2-206ENST00000439717 PDK4Q16654 411 aa11.26□□□□□ -0.61
HSPG2-206ENST00000439717 PFKFB4Q16877 469 aa11.26□□□□□ -0.61
HSPG2-206ENST00000439717 HKDC1Q2TB90 917 aa11.26□□□□□ -0.61
HSPG2-206ENST00000439717 ARHGEF39Q8N4T4 335 aa11.26□□□□□ -0.61
HSPG2-206ENST00000439717 ENDOVQ8N8Q3 282 aaKnown RBP11.26□□□□□ -0.61
HSPG2-206ENST00000439717 MZB1Q8WU39 189 aa11.26□□□□□ -0.61
HSPG2-206ENST00000439717 SLC13A3Q8WWT9 602 aa11.26□□□□□ -0.61
HSPG2-206ENST00000439717 WDR34Q96EX3 536 aa11.26□□□□□ -0.61
HSPG2-206ENST00000439717 SEC16BQ96JE7 1060 aa11.26□□□□□ -0.61
HSPG2-206ENST00000439717 SCYL1Q96KG9 808 aa11.26□□□□□ -0.61
HSPG2-206ENST00000439717 C10orf90Q96M02 699 aa11.26□□□□□ -0.61
HSPG2-206ENST00000439717 MRPL46Q9H2W6 279 aaKnown RBP11.26□□□□□ -0.61
HSPG2-206ENST00000439717 NT5DC2Q9H857 520 aa11.26□□□□□ -0.61
HSPG2-206ENST00000439717 ZNF304Q9HCX3 659 aa11.26□□□□□ -0.61
HSPG2-206ENST00000439717 ZNF358Q9NW07 568 aa11.26□□□□□ -0.61
HSPG2-206ENST00000439717 COPG2Q9UBF2 871 aa11.26□□□□□ -0.61
HSPG2-206ENST00000439717 OPTCQ9UBM4 332 aa11.26□□□□□ -0.61
HSPG2-206ENST00000439717 TBK1Q9UHD2 729 aa11.26□□□□□ -0.61
HSPG2-206ENST00000439717 ZFP69BQ9UJL9 534 aa11.26□□□□□ -0.61
HSPG2-206ENST00000439717 TCFL5Q9UL49 500 aa11.26□□□□□ -0.61
HSPG2-206ENST00000439717 TNPO3Q9Y5L0 923 aaKnown RBP11.26□□□□□ -0.61
HSPG2-206ENST00000439717 MRPS18BQ9Y676 258 aaKnown RBP11.26□□□□□ -0.61
HSPG2-206ENST00000439717 ANKRD12Q6UB98 2062 aa11.25□□□□□ -0.61
HSPG2-206ENST00000439717 HEATR5BQ9P2D3 2071 aa11.25□□□□□ -0.61
HSPG2-206ENST00000439717 NKX2-8O15522 239 aa11.25□□□□□ -0.61
HSPG2-206ENST00000439717 P2RX6O15547 441 aa11.25□□□□□ -0.61
HSPG2-206ENST00000439717 CCNT2O60583 730 aaKnown RBP11.25□□□□□ -0.61
HSPG2-206ENST00000439717 SMIM24O75264 130 aa11.25□□□□□ -0.61
HSPG2-206ENST00000439717 MED26O95402 600 aa11.25□□□□□ -0.61
HSPG2-206ENST00000439717 ITGB2P05107 769 aa11.25□□□□□ -0.61
HSPG2-206ENST00000439717 ITGAXP20702 1163 aa11.25□□□□□ -0.61
HSPG2-206ENST00000439717 CASP2P42575 452 aa11.25□□□□□ -0.61
HSPG2-206ENST00000439717 MEF2AQ02078 507 aaPredicted RBP11.25□□□□□ -0.61
HSPG2-206ENST00000439717 PCDH1Q08174 1060 aa11.25□□□□□ -0.61
HSPG2-206ENST00000439717 LAPTM5Q13571 262 aa11.25□□□□□ -0.61
HSPG2-206ENST00000439717 PCBP2Q15366 365 aaKnown RBP eCLIP11.25□□□□□ -0.61
HSPG2-206ENST00000439717 TBCCQ15814 346 aa11.25□□□□□ -0.61
HSPG2-206ENST00000439717 UGT8Q16880 541 aa11.25□□□□□ -0.61
HSPG2-206ENST00000439717 FBXO48Q5FWF7 155 aa11.25□□□□□ -0.61
HSPG2-206ENST00000439717 MLIPQ5VWP3 458 aa11.25□□□□□ -0.61
HSPG2-206ENST00000439717 TMEM214Q6NUQ4 689 aaKnown RBP11.25□□□□□ -0.61
HSPG2-206ENST00000439717 MRPL14Q6P1L8 145 aaKnown RBP11.25□□□□□ -0.61
HSPG2-206ENST00000439717 C16orf46Q6P387 395 aa11.25□□□□□ -0.61
HSPG2-206ENST00000439717 OVCH1Q7RTY7 1134 aa11.25□□□□□ -0.61
HSPG2-206ENST00000439717 KRT78Q8N1N4 520 aa11.25□□□□□ -0.61
HSPG2-206ENST00000439717 RIBC1Q8N443 379 aaPredicted RBP11.25□□□□□ -0.61
HSPG2-206ENST00000439717 MREGQ8N565 214 aa11.25□□□□□ -0.61
HSPG2-206ENST00000439717 TRPV3Q8NET8 790 aa11.25□□□□□ -0.61
HSPG2-206ENST00000439717 TTLQ8NG68 377 aa11.25□□□□□ -0.61
HSPG2-206ENST00000439717 NT5CQ8TCD5 201 aa11.25□□□□□ -0.61
HSPG2-206ENST00000439717 ESAMQ96AP7 390 aa11.25□□□□□ -0.61
HSPG2-206ENST00000439717 PTCD3Q96EY7 689 aaKnown RBP11.25□□□□□ -0.61
HSPG2-206ENST00000439717 RUFY1Q96T51 708 aa11.25□□□□□ -0.61
HSPG2-206ENST00000439717 EFCAB11Q9BUY7 163 aa11.25□□□□□ -0.61
HSPG2-206ENST00000439717 ROPN1BQ9BZX4 212 aaPredicted RBP11.25□□□□□ -0.61
HSPG2-206ENST00000439717 DRC3Q9H069 523 aa11.25□□□□□ -0.61
HSPG2-206ENST00000439717 SLC26A1Q9H2B4 701 aa11.25□□□□□ -0.61
HSPG2-206ENST00000439717 WDR54Q9H977 334 aa11.25□□□□□ -0.61
HSPG2-206ENST00000439717 ROPN1Q9HAT0 212 aaPredicted RBP11.25□□□□□ -0.61
HSPG2-206ENST00000439717 SLC22A11Q9NSA0 550 aa11.25□□□□□ -0.61
HSPG2-206ENST00000439717 GEMIN8Q9NWZ8 242 aaKnown RBP11.25□□□□□ -0.61
HSPG2-206ENST00000439717 CPSF2Q9P2I0 782 aaKnown RBP11.25□□□□□ -0.61
HSPG2-206ENST00000439717 XPR1Q9UBH6 696 aa11.25□□□□□ -0.61
HSPG2-206ENST00000439717 DCDC2Q9UHG0 476 aa11.25□□□□□ -0.61
HSPG2-206ENST00000439717 H0YIG0 161 aa11.24□□□□□ -0.61
HSPG2-206ENST00000439717 STX16-NPEPL1H3BU86 382 aa11.24□□□□□ -0.61
HSPG2-206ENST00000439717 STX16O14662 325 aa11.24□□□□□ -0.61
HSPG2-206ENST00000439717 NDUFS4O43181 175 aa11.24□□□□□ -0.61
HSPG2-206ENST00000439717 KLF7O75840 302 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms