RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 NAXEQ8NCW5 288 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 KLHDC9Q8NEP7 349 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 TM9SF4Q92544 642 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 PLEKHG4BQ96PX9 1271 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 HPF1Q9NWY4 346 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 PDP2Q9P2J9 529 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 ACAD8Q9UKU7 415 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 BCHEP06276 602 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 RNH1P13489 461 aaKnown RBP11.72□□□□□ -0.53
NEK1-201ENST00000439128 NUDT1P36639 197 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 CSNK1EP49674 416 aaKnown RBP11.72□□□□□ -0.53
NEK1-201ENST00000439128 ARSFP54793 590 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 RPS15AP62244 130 aaKnown RBP11.72□□□□□ -0.53
NEK1-201ENST00000439128 PPP2R2BQ00005 443 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 DPY19L1Q2PZI1 675 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 KIAA0895LQ68EN5 471 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 OR56A1Q8NGH5 318 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 GAREM1Q9H706 876 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 RMI1Q9H9A7 625 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 MS4A12Q9NXJ0 267 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 RAB21Q9UL25 225 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 CLEC4AQ9UMR7 237 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 FEZF1A0PJY2 475 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 BCL10O95999 233 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 CYP17A1P05093 508 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 STAT5AP42229 794 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 KIAA0319Q5VV43 1072 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 NANOGNBQ7Z5D8 188 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 LRRC57Q8N9N7 239 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 ENKURQ8TC29 256 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 SPPL3Q8TCT6 385 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 DIO2Q92813 273 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 NAT6Q93015 286 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 GATA5Q9BWX5 397 aaPredicted RBP11.72□□□□□ -0.53
NEK1-201ENST00000439128 VRTNQ9H8Y1 702 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 HCRTR2O43614 444 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 GADD45GO95257 159 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 MTTPP55157 894 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 BTBD16Q32M84 506 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 RBM20Q5T481 1227 aaKnown RBP11.72□□□□□ -0.53
NEK1-201ENST00000439128 DRICH1Q6PGQ1 229 aaPredicted RBP11.72□□□□□ -0.53
NEK1-201ENST00000439128 DNM1P34Q6PK57 102 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 GLB1L3Q8NCI6 653 aaPredicted RBP11.72□□□□□ -0.53
NEK1-201ENST00000439128 KBTBD7Q8WVZ9 684 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 PIWIL1Q96J94 861 aaKnown RBP11.72□□□□□ -0.53
NEK1-201ENST00000439128 PEBP4Q96S96 227 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 CCNB1IP1Q9NPC3 277 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 INMTO95050 263 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 PAPSS2O95340 614 aaPredicted RBP11.71□□□□□ -0.53
NEK1-201ENST00000439128 ALOX12P18054 663 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 MATN1P21941 496 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 CBLP22681 906 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 PBX2P40425 430 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 ARHGAP8P85298 464 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 MRPL49Q13405 166 aaKnown RBP11.71□□□□□ -0.53
NEK1-201ENST00000439128 KCNC3Q14003 757 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 TCTE1Q5JU00 501 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 EGFLAMQ63HQ2 1017 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 TMPPEQ6ZT21 453 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 IKBIPQ70UQ0 350 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 PARP8Q8N3A8 854 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 LPAR4Q99677 370 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 RTKNQ9BST9 563 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 CRB3Q9BUF7 120 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 EPB41L1Q9H4G0 881 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 ZNF334Q9HCZ1 680 aaPredicted RBP11.71□□□□□ -0.53
NEK1-201ENST00000439128 RNF11Q9Y3C5 154 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 TCRBV7S3A2A0A539 114 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 EIF1AYO14602 144 aaKnown RBP11.71□□□□□ -0.53
NEK1-201ENST00000439128 TMEM63AO94886 807 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 IMPDH1P20839 514 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 KLF10Q13118 480 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 NFE2L1Q14494 772 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 SLC9A4Q6AI14 798 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 FIGLAQ6QHK4 219 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 GALNTL5Q7Z4T8 443 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 SLC30A8Q8IWU4 369 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 OR4F6Q8NGB9 312 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 GALPQ9UBC7 116 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 SPATA2Q9UM82 520 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 MANBAO00462 879 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 SOX1O00570 391 aaPredicted RBP11.71□□□□□ -0.53
NEK1-201ENST00000439128 PLIN3O60664 434 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 LCA5LO95447 670 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 CLRN1P58418 232 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 ABATP80404 500 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 MRPS35P82673 323 aaKnown RBP11.71□□□□□ -0.53
NEK1-201ENST00000439128 TARDBPQ13148 414 aaKnown RBP eCLIP11.71□□□□□ -0.534e-6■■■■□ 22.3
NEK1-201ENST00000439128 C6orf132Q5T0Z8 1188 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 OR4F3Q6IEY1 312 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 DCP2Q8IU60 420 aaKnown RBP11.71□□□□□ -0.53
NEK1-201ENST00000439128 UMODL1-AS1Q8N2C9 162 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 ZNF611Q8N823 705 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 PBX4Q9BYU1 374 aa11.71□□□□□ -0.53
NEK1-201ENST00000439128 EFCAB7A8K855 629 aa11.71□□□□□ -0.54
NEK1-201ENST00000439128 HMGB3O15347 200 aaKnown RBP11.71□□□□□ -0.54
NEK1-201ENST00000439128 FARS2O95363 451 aaKnown RBP11.71□□□□□ -0.54
NEK1-201ENST00000439128 PCSK2P16519 638 aa11.71□□□□□ -0.54
NEK1-201ENST00000439128 XKP51811 444 aa11.71□□□□□ -0.54
NEK1-201ENST00000439128 ZNF33AQ06730 810 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms