RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 CFAP36Q96G28 342 aa17.49■□□□□ 0.39
AC004540.1-201ENST00000439120 MAGEB10Q96LZ2 347 aaPredicted RBP17.49■□□□□ 0.39
AC004540.1-201ENST00000439120 BARD1Q99728 777 aaKnown RBP17.49■□□□□ 0.39
AC004540.1-201ENST00000439120 TRIM54Q9BYV2 358 aa17.49■□□□□ 0.39
AC004540.1-201ENST00000439120 GRPEL1Q9HAV7 217 aa17.49■□□□□ 0.39
AC004540.1-201ENST00000439120 ANKHQ9HCJ1 492 aa17.49■□□□□ 0.39
AC004540.1-201ENST00000439120 ARL15Q9NXU5 204 aa17.49■□□□□ 0.39
AC004540.1-201ENST00000439120 ERRFI1Q9UJM3 462 aaPredicted RBP17.49■□□□□ 0.39
AC004540.1-201ENST00000439120 KCNE1BA0A087WTH5 132 aa17.48■□□□□ 0.39
AC004540.1-201ENST00000439120 FEZF1A0PJY2 475 aa17.48■□□□□ 0.39
AC004540.1-201ENST00000439120 NSA2O95478 260 aaKnown RBP17.48■□□□□ 0.39
AC004540.1-201ENST00000439120 AHSGP02765 367 aa17.48■□□□□ 0.39
AC004540.1-201ENST00000439120 SLC35G6P0C7Q6 338 aa17.48■□□□□ 0.39
AC004540.1-201ENST00000439120 RNF224P0DH78 156 aa17.48■□□□□ 0.39
AC004540.1-201ENST00000439120 CDH1P12830 882 aa17.48■□□□□ 0.39
AC004540.1-201ENST00000439120 CSNK1G2P78368 415 aa17.48■□□□□ 0.39
AC004540.1-201ENST00000439120 MSS51Q4VC12 460 aa17.48■□□□□ 0.39
AC004540.1-201ENST00000439120 HP1BP3Q5SSJ5 553 aaPredicted RBP17.48■□□□□ 0.39
AC004540.1-201ENST00000439120 HIST2H2BCQ6DN03 193 aa17.48■□□□□ 0.39
AC004540.1-201ENST00000439120 LCTLQ6UWM7 567 aa17.48■□□□□ 0.39
AC004540.1-201ENST00000439120 SYDE1Q6ZW31 735 aaPredicted RBP17.48■□□□□ 0.39
AC004540.1-201ENST00000439120 VN1R4Q7Z5H5 301 aa17.48■□□□□ 0.39
AC004540.1-201ENST00000439120 CNTN4Q8IWV2 1026 aa17.48■□□□□ 0.39
AC004540.1-201ENST00000439120 KLHL7Q8IXQ5 586 aa17.48■□□□□ 0.39
AC004540.1-201ENST00000439120 CATSPER1Q8NEC5 780 aa17.48■□□□□ 0.39
AC004540.1-201ENST00000439120 ZCCHC10Q8TBK6 192 aa17.48■□□□□ 0.39
AC004540.1-201ENST00000439120 FAR1Q8WVX9 515 aa17.48■□□□□ 0.39
AC004540.1-201ENST00000439120 CAPZA3Q96KX2 299 aa17.48■□□□□ 0.39
AC004540.1-201ENST00000439120 RUNDC3BQ96NL0 473 aa17.48■□□□□ 0.39
AC004540.1-201ENST00000439120 HAUS8Q9BT25 410 aa17.48■□□□□ 0.39
AC004540.1-201ENST00000439120 FAM129AQ9BZQ8 928 aa17.48■□□□□ 0.39
AC004540.1-201ENST00000439120 ZNF700Q9H0M5 742 aa17.48■□□□□ 0.39
AC004540.1-201ENST00000439120 C19orf25Q9UFG5 118 aaPredicted RBP17.48■□□□□ 0.39
AC004540.1-201ENST00000439120 CORO1CQ9ULV4 474 aaPredicted RBP17.48■□□□□ 0.39
AC004540.1-201ENST00000439120 CHMP2BQ9UQN3 213 aa17.48■□□□□ 0.39
AC004540.1-201ENST00000439120 MRPS2Q9Y399 296 aaKnown RBP17.48■□□□□ 0.39
AC004540.1-201ENST00000439120 A0A1W2PQ72 361 aa17.47■□□□□ 0.39
AC004540.1-201ENST00000439120 EDN3P14138 238 aa17.47■□□□□ 0.39
AC004540.1-201ENST00000439120 IL1RNP18510 177 aa17.47■□□□□ 0.39
AC004540.1-201ENST00000439120 GABRB3P28472 473 aa17.47■□□□□ 0.39
AC004540.1-201ENST00000439120 TIAL1Q01085 375 aaKnown RBP eCLIP17.47■□□□□ 0.39
AC004540.1-201ENST00000439120 DR1Q01658 176 aa17.47■□□□□ 0.39
AC004540.1-201ENST00000439120 MORF4L2Q15014 288 aa17.47■□□□□ 0.39
AC004540.1-201ENST00000439120 PHKG1Q16816 387 aa17.47■□□□□ 0.39
AC004540.1-201ENST00000439120 GALNT7Q86SF2 657 aa17.47■□□□□ 0.39
AC004540.1-201ENST00000439120 ASPGQ86U10 573 aa17.47■□□□□ 0.39
AC004540.1-201ENST00000439120 TBC1D19Q8N5T2 526 aa17.47■□□□□ 0.39
AC004540.1-201ENST00000439120 MACROD1Q9BQ69 325 aa17.47■□□□□ 0.39
AC004540.1-201ENST00000439120 TUBB6Q9BUF5 446 aa17.47■□□□□ 0.39
AC004540.1-201ENST00000439120 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.47■□□□□ 0.39
AC004540.1-201ENST00000439120 HCN3Q9P1Z3 774 aa17.47■□□□□ 0.39
AC004540.1-201ENST00000439120 TEKT2Q9UIF3 430 aa17.47■□□□□ 0.39
AC004540.1-201ENST00000439120 SH2B3Q9UQQ2 575 aa17.47■□□□□ 0.39
AC004540.1-201ENST00000439120 ICE1Q9Y2F5 2266 aa17.46■□□□□ 0.39
AC004540.1-201ENST00000439120 LOC102723996A0A087X1L8 192 aa17.46■□□□□ 0.39
AC004540.1-201ENST00000439120 TRAV17A0A0B4J275 112 aa17.46■□□□□ 0.39
AC004540.1-201ENST00000439120 LDLRP01130 860 aa17.46■□□□□ 0.39
AC004540.1-201ENST00000439120 CYC1P08574 325 aa17.46■□□□□ 0.39
AC004540.1-201ENST00000439120 SOX11P35716 441 aa17.46■□□□□ 0.39
AC004540.1-201ENST00000439120 BCL6P41182 706 aa17.46■□□□□ 0.39
AC004540.1-201ENST00000439120 ELK3P41970 407 aa17.46■□□□□ 0.39
AC004540.1-201ENST00000439120 XCR1P46094 333 aa17.46■□□□□ 0.39
AC004540.1-201ENST00000439120 AP1S2P56377 157 aa17.46■□□□□ 0.39
AC004540.1-201ENST00000439120 PCOLCEQ15113 449 aa17.46■□□□□ 0.39
AC004540.1-201ENST00000439120 TEDDM1Q5T9Z0 273 aa17.46■□□□□ 0.39
AC004540.1-201ENST00000439120 HECTD2Q5U5R9 776 aa17.46■□□□□ 0.39
AC004540.1-201ENST00000439120 ABHD17BQ5VST6 288 aa17.46■□□□□ 0.39
AC004540.1-201ENST00000439120 DUPD1Q68J44 220 aa17.46■□□□□ 0.39
AC004540.1-201ENST00000439120 FAM45BPQ6NSW5 357 aa17.46■□□□□ 0.39
AC004540.1-201ENST00000439120 TMEM214Q6NUQ4 689 aaKnown RBP17.46■□□□□ 0.39
AC004540.1-201ENST00000439120 RPUSD3Q6P087 351 aaKnown RBP17.46■□□□□ 0.39
AC004540.1-201ENST00000439120 TMEM205Q6UW68 189 aa17.46■□□□□ 0.39
AC004540.1-201ENST00000439120 PRSS41Q7RTY9 318 aa17.46■□□□□ 0.39
AC004540.1-201ENST00000439120 MAMDC2Q7Z304 686 aaPredicted RBP17.46■□□□□ 0.39
AC004540.1-201ENST00000439120 IGDCC3Q8IVU1 814 aa17.46■□□□□ 0.39
AC004540.1-201ENST00000439120 BCORP1Q8N888 145 aa17.46■□□□□ 0.39
AC004540.1-201ENST00000439120 OR51Q1Q8NH59 317 aa17.46■□□□□ 0.39
AC004540.1-201ENST00000439120 SUN3Q8TAQ9 357 aa17.46■□□□□ 0.39
AC004540.1-201ENST00000439120 FAM45AQ8TCE6 357 aa17.46■□□□□ 0.39
AC004540.1-201ENST00000439120 SLC13A3Q8WWT9 602 aa17.46■□□□□ 0.39
AC004540.1-201ENST00000439120 ATL1Q8WXF7 558 aa17.46■□□□□ 0.39
AC004540.1-201ENST00000439120 PSMF1Q92530 271 aa17.46■□□□□ 0.39
AC004540.1-201ENST00000439120 SGPP1Q9BX95 441 aa17.46■□□□□ 0.39
AC004540.1-201ENST00000439120 VN1R1Q9GZP7 353 aa17.46■□□□□ 0.39
AC004540.1-201ENST00000439120 OLAHQ9NV23 265 aa17.46■□□□□ 0.39
AC004540.1-201ENST00000439120 PLA2G3Q9NZ20 509 aa17.46■□□□□ 0.39
AC004540.1-201ENST00000439120 SLC17A6Q9P2U8 582 aa17.46■□□□□ 0.39
AC004540.1-201ENST00000439120 SPTAN1Q13813 2472 aaKnown RBP17.46■□□□□ 0.39
AC004540.1-201ENST00000439120 SPTBN1Q01082 2364 aaKnown RBP17.46■□□□□ 0.39
AC004540.1-201ENST00000439120 SGK494L7N484 410 aa17.45■□□□□ 0.38
AC004540.1-201ENST00000439120 JRKO75564 520 aa17.45■□□□□ 0.38
AC004540.1-201ENST00000439120 SEC24DO94855 1032 aaPredicted RBP17.45■□□□□ 0.38
AC004540.1-201ENST00000439120 CELA2AP08217 269 aa17.45■□□□□ 0.38
AC004540.1-201ENST00000439120 MYBL2P10244 700 aa17.45■□□□□ 0.38
AC004540.1-201ENST00000439120 ITGAMP11215 1152 aa17.45■□□□□ 0.38
AC004540.1-201ENST00000439120 TNFSF10P50591 281 aa17.45■□□□□ 0.38
AC004540.1-201ENST00000439120 CCR8P51685 355 aa17.45■□□□□ 0.38
AC004540.1-201ENST00000439120 ARL4CP56559 192 aa17.45■□□□□ 0.38
AC004540.1-201ENST00000439120 PER3P56645 1201 aa17.45■□□□□ 0.38
AC004540.1-201ENST00000439120 SKP1P63208 163 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms