RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 GCNT6Q5T4J0 391 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 KANK2Q63ZY3 851 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 NOXRED1Q6NXP6 359 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 NPAS3Q8IXF0 933 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 STX19Q8N4C7 294 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 DNAJB8Q8NHS0 232 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 ZNF607Q96SK3 696 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 XKR8Q9H6D3 395 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 ACTR3BQ9P1U1 418 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 CAB39Q9Y376 341 aaPredicted RBP11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 GMPPBQ9Y5P6 360 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 HEBP2Q9Y5Z4 205 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 A0A1W2PPW3 197 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 EIF3FO00303 357 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 SERPINA1P01009 418 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 ITGB7P26010 798 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 PTX3P26022 381 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 SUOXP51687 545 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 FOXM1Q08050 763 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 TANGO2Q6ICL3 276 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 NANOGP8Q6NSW7 305 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 MFSD6LQ8IWD5 586 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 C10orf53Q8N6V4 93 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 VN1R3Q9BXE9 311 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 NANOGQ9H9S0 305 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 INTS7Q9NVH2 962 aaKnown RBP11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 CD207Q9UJ71 328 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 PIAS3Q9Y6X2 628 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 H7BY64 318 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 PEX11BO96011 259 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 BUD31P41223 144 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 RPS9P46781 194 aaKnown RBP11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 CTSCP53634 463 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 LIPJQ5W064 366 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 PRR23BQ6ZRT6 265 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 OR4E2Q8NGC2 313 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 AURKBQ96GD4 344 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 SPACA7Q96KW9 195 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 C3orf30Q96M34 536 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 ZSWIM3Q96MP5 696 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 PRAP1Q96NZ9 151 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 SPATA5L1Q9BVQ7 753 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 FANCEQ9HB96 536 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 SEMA3GQ9NS98 782 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 TPRKBQ9Y3C4 175 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 CEP350Q5VT06 3117 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 HTRA2O43464 458 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 ASNA1O43681 348 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 PDE9AO76083 593 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 ENGP17813 658 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 C5AR1P21730 350 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 CCR2P41597 374 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 TBPL1P62380 186 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 PPP4R4Q6NUP7 873 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 BLOC1S3Q6QNY0 202 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 LSMEM2Q8N112 164 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 KRTCAP2Q8N6L1 136 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 FAM46DQ8NEK8 389 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 SLC29A1Q99808 456 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 ZNF696Q9H7X3 374 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 RC3H2Q9HBD1 1191 aaKnown RBP11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 FZD3Q9NPG1 666 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 SEC14L3Q9UDX4 400 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 ENOPH1Q9UHY7 261 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 ACSL5Q9ULC5 683 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 SLC9A8Q9Y2E8 581 aa11.19□□□□□ -0.62
TRAPPC9-202ENST00000438773 PIPSLA2A3N6 862 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 hCG_2039718K7EN88 272 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 JAK1P23458 1154 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 NDUFS1P28331 727 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 GJA4P35212 333 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 MAGEA12P43365 314 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 STXBP1P61764 594 aaKnown RBP11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 APOFQ13790 326 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 GNA13Q14344 377 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 RFTN2Q52LD8 501 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 USP39Q53GS9 565 aaKnown RBP11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 SNAP47Q5SQN1 464 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 ANKRD26P1Q6NSI1 321 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 CASP12Q6UXS9 341 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 NUDT13Q86X67 352 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 TICAM1Q8IUC6 712 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 ZDHHC21Q8IVQ6 265 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 OMA1Q96E52 524 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 SMPD3Q9NY59 655 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 ZNF282Q9UDV7 671 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 H7C0S8 307 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 EI24O14681 340 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 ERI3O43414 337 aaKnown RBP11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 NOBOXO60393 691 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 RNGTTO60942 597 aaKnown RBP11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 CNOT3O75175 753 aaKnown RBP11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 C1SP09871 688 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 RAP2AP10114 183 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 SOX9P48436 509 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 TAS2R50P59544 299 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 MRPL28Q13084 256 aaKnown RBP11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 RFX4Q33E94 735 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 TYW3Q6IPR3 259 aaKnown RBP11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 TNFAIP8L2Q6P589 184 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms