RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 UBXN10Q96LJ8 280 aa23.52■■□□□ 1.36
RAPGEF1-206ENST00000438647 SLC22A14Q9Y267 594 aa23.52■■□□□ 1.36
RAPGEF1-206ENST00000438647 PCDHGB7Q9Y5F8 929 aa23.52■■□□□ 1.36
RAPGEF1-206ENST00000438647 CCDC88CQ9P219 2028 aa23.52■■□□□ 1.36
RAPGEF1-206ENST00000438647 AGPSO00116 658 aa23.51■■□□□ 1.35
RAPGEF1-206ENST00000438647 CEACAM4O75871 244 aa23.51■■□□□ 1.35
RAPGEF1-206ENST00000438647 ZGLP1P0C6A0 271 aa23.51■■□□□ 1.35
RAPGEF1-206ENST00000438647 CD1DP15813 335 aa23.51■■□□□ 1.35
RAPGEF1-206ENST00000438647 SLC26A3P40879 764 aa23.51■■□□□ 1.35
RAPGEF1-206ENST00000438647 EFTUD2Q15029 972 aaKnown RBP eCLIP23.51■■□□□ 1.359e-6■■□□□ 13.8
RAPGEF1-206ENST00000438647 CDKL4Q5MAI5 379 aa23.51■■□□□ 1.35
RAPGEF1-206ENST00000438647 DCAF10Q5QP82 559 aa23.51■■□□□ 1.35
RAPGEF1-206ENST00000438647 CCDC91Q7Z6B0 441 aa23.51■■□□□ 1.35
RAPGEF1-206ENST00000438647 TBC1D1Q86TI0 1168 aaPredicted RBP23.51■■□□□ 1.35
RAPGEF1-206ENST00000438647 GPSM1Q86YR5 675 aa23.51■■□□□ 1.35
RAPGEF1-206ENST00000438647 SPATA6LQ8N4H0 392 aa23.51■■□□□ 1.35
RAPGEF1-206ENST00000438647 MFSD9Q8NBP5 474 aa23.51■■□□□ 1.35
RAPGEF1-206ENST00000438647 SLC13A3Q8WWT9 602 aa23.51■■□□□ 1.35
RAPGEF1-206ENST00000438647 NEIL2Q969S2 332 aa23.51■■□□□ 1.35
RAPGEF1-206ENST00000438647 RHBDF1Q96CC6 855 aa23.51■■□□□ 1.35
RAPGEF1-206ENST00000438647 CRB3Q9BUF7 120 aa23.51■■□□□ 1.35
RAPGEF1-206ENST00000438647 YIPF2Q9BWQ6 316 aa23.51■■□□□ 1.35
RAPGEF1-206ENST00000438647 UNKQ9C0B0 810 aaKnown RBP23.51■■□□□ 1.35
RAPGEF1-206ENST00000438647 PELI2Q9HAT8 420 aa23.51■■□□□ 1.35
RAPGEF1-206ENST00000438647 MKKSQ9NPJ1 570 aaPredicted RBP23.51■■□□□ 1.35
RAPGEF1-206ENST00000438647 C14orf105Q9NVL8 296 aa23.51■■□□□ 1.35
RAPGEF1-206ENST00000438647 NINJ2Q9NZG7 142 aa23.51■■□□□ 1.35
RAPGEF1-206ENST00000438647 TRPC4Q9UBN4 977 aa23.51■■□□□ 1.35
RAPGEF1-206ENST00000438647 MAP4K5Q9Y4K4 846 aa23.51■■□□□ 1.35
RAPGEF1-206ENST00000438647 A0A0A6YYC8 382 aaPredicted RBP23.5■■□□□ 1.35
RAPGEF1-206ENST00000438647 TRBC2A0A5B9 178 aa23.5■■□□□ 1.35
RAPGEF1-206ENST00000438647 H0YIG0 161 aa23.5■■□□□ 1.35
RAPGEF1-206ENST00000438647 I3L1I5 382 aaPredicted RBP23.5■■□□□ 1.35
RAPGEF1-206ENST00000438647 FOXS1O43638 330 aa23.5■■□□□ 1.35
RAPGEF1-206ENST00000438647 KLHL41O60662 606 aa23.5■■□□□ 1.35
RAPGEF1-206ENST00000438647 IPO13O94829 963 aaKnown RBP23.5■■□□□ 1.35
RAPGEF1-206ENST00000438647 KLRB1Q12918 225 aa23.5■■□□□ 1.35
RAPGEF1-206ENST00000438647 RBBP7Q16576 425 aa23.5■■□□□ 1.35
RAPGEF1-206ENST00000438647 TMEM214Q6NUQ4 689 aaKnown RBP23.5■■□□□ 1.35
RAPGEF1-206ENST00000438647 SHISA6Q6ZSJ9 500 aa23.5■■□□□ 1.35
RAPGEF1-206ENST00000438647 TEX19Q8NA77 164 aa23.5■■□□□ 1.35
RAPGEF1-206ENST00000438647 TM4SF19Q96DZ7 209 aa23.5■■□□□ 1.35
RAPGEF1-206ENST00000438647 TSNARE1Q96NA8 513 aa23.5■■□□□ 1.35
RAPGEF1-206ENST00000438647 CDC42EP4Q9H3Q1 356 aaKnown RBP23.5■■□□□ 1.35
RAPGEF1-206ENST00000438647 ACSS3Q9H6R3 686 aa23.5■■□□□ 1.35
RAPGEF1-206ENST00000438647 CNOT10Q9H9A5 744 aaKnown RBP23.5■■□□□ 1.35
RAPGEF1-206ENST00000438647 MLXIPLQ9NP71 852 aa23.5■■□□□ 1.35
RAPGEF1-206ENST00000438647 GPR83Q9NYM4 423 aa23.5■■□□□ 1.35
RAPGEF1-206ENST00000438647 MED13Q9UHV7 2174 aa23.5■■□□□ 1.35
RAPGEF1-206ENST00000438647 NCF1BA6NI72 391 aaPredicted RBP23.49■■□□□ 1.35
RAPGEF1-206ENST00000438647 NCF1CA8MVU1 366 aaPredicted RBP23.49■■□□□ 1.35
RAPGEF1-206ENST00000438647 J3QKU1 62 aa23.49■■□□□ 1.35
RAPGEF1-206ENST00000438647 OR1F1O43749 312 aa23.49■■□□□ 1.35
RAPGEF1-206ENST00000438647 LCMT2O60294 686 aaKnown RBP23.49■■□□□ 1.35
RAPGEF1-206ENST00000438647 WDR47O94967 919 aa23.49■■□□□ 1.35
RAPGEF1-206ENST00000438647 NSA2O95478 260 aaKnown RBP23.49■■□□□ 1.35
RAPGEF1-206ENST00000438647 NCF1P14598 390 aaPredicted RBP23.49■■□□□ 1.35
RAPGEF1-206ENST00000438647 NR1D1P20393 614 aa23.49■■□□□ 1.35
RAPGEF1-206ENST00000438647 KLC1Q07866 573 aa23.49■■□□□ 1.35
RAPGEF1-206ENST00000438647 CATSPEREQ5SY80 951 aa23.49■■□□□ 1.35
RAPGEF1-206ENST00000438647 CMC1Q7Z7K0 106 aa23.49■■□□□ 1.35
RAPGEF1-206ENST00000438647 TMPRSS11BQ86T26 416 aa23.49■■□□□ 1.35
RAPGEF1-206ENST00000438647 KLHDC8AQ8IYD2 350 aa23.49■■□□□ 1.35
RAPGEF1-206ENST00000438647 FDCSPQ8NFU4 85 aa23.49■■□□□ 1.35
RAPGEF1-206ENST00000438647 KIAA1191Q96A73 305 aa23.49■■□□□ 1.35
RAPGEF1-206ENST00000438647 AIF1LQ9BQI0 150 aa23.49■■□□□ 1.35
RAPGEF1-206ENST00000438647 TGIF2Q9GZN2 237 aa23.49■■□□□ 1.35
RAPGEF1-206ENST00000438647 WWOXQ9NZC7 414 aa23.49■■□□□ 1.35
RAPGEF1-206ENST00000438647 ZNF451Q9Y4E5 1061 aa23.49■■□□□ 1.35
RAPGEF1-206ENST00000438647 A6NL46 340 aa23.48■■□□□ 1.35
RAPGEF1-206ENST00000438647 K7EM74 188 aa23.48■■□□□ 1.35
RAPGEF1-206ENST00000438647 STATHP02808 62 aa23.48■■□□□ 1.35
RAPGEF1-206ENST00000438647 S100BP04271 92 aaPredicted RBP23.48■■□□□ 1.35
RAPGEF1-206ENST00000438647 SLC35E2BP0CK96 405 aa23.48■■□□□ 1.35
RAPGEF1-206ENST00000438647 GNAZP19086 355 aa23.48■■□□□ 1.35
RAPGEF1-206ENST00000438647 SLC6A12P48065 614 aa23.48■■□□□ 1.35
RAPGEF1-206ENST00000438647 MEF2AQ02078 507 aaPredicted RBP23.48■■□□□ 1.35
RAPGEF1-206ENST00000438647 PWP1Q13610 501 aa23.48■■□□□ 1.35
RAPGEF1-206ENST00000438647 UAP1Q16222 522 aaPredicted RBP23.48■■□□□ 1.35
RAPGEF1-206ENST00000438647 VWA2Q5GFL6 755 aa23.48■■□□□ 1.35
RAPGEF1-206ENST00000438647 SULT1C3Q6IMI6 304 aa23.48■■□□□ 1.35
RAPGEF1-206ENST00000438647 NXPE4Q6UWF7 544 aa23.48■■□□□ 1.35
RAPGEF1-206ENST00000438647 HPS6Q86YV9 775 aa23.48■■□□□ 1.35
RAPGEF1-206ENST00000438647 AMER3Q8N944 861 aa23.48■■□□□ 1.35
RAPGEF1-206ENST00000438647 STAG3L4Q8TBR4 150 aa23.48■■□□□ 1.35
RAPGEF1-206ENST00000438647 MRRFQ96E11 262 aaKnown RBP23.48■■□□□ 1.35
RAPGEF1-206ENST00000438647 CAPS2Q9BXY5 557 aa23.48■■□□□ 1.35
RAPGEF1-206ENST00000438647 FUT8Q9BYC5 575 aa23.48■■□□□ 1.35
RAPGEF1-206ENST00000438647 NMRAL1Q9HBL8 299 aa23.48■■□□□ 1.35
RAPGEF1-206ENST00000438647 ANKHQ9HCJ1 492 aa23.48■■□□□ 1.35
RAPGEF1-206ENST00000438647 ATP13A2Q9NQ11 1180 aa23.48■■□□□ 1.35
RAPGEF1-206ENST00000438647 C3orf18Q9UK00 162 aa23.48■■□□□ 1.35
RAPGEF1-206ENST00000438647 RNF112Q9ULX5 631 aa23.48■■□□□ 1.35
RAPGEF1-206ENST00000438647 HS3ST3B1Q9Y662 390 aa23.48■■□□□ 1.35
RAPGEF1-206ENST00000438647 SOCS6O14544 535 aa23.47■■□□□ 1.35
RAPGEF1-206ENST00000438647 PCDH17O14917 1159 aa23.47■■□□□ 1.35
RAPGEF1-206ENST00000438647 NDUFS4O43181 175 aa23.47■■□□□ 1.35
RAPGEF1-206ENST00000438647 ACSL3O95573 720 aa23.47■■□□□ 1.35
RAPGEF1-206ENST00000438647 CXCR2P25025 360 aa23.47■■□□□ 1.35
RAPGEF1-206ENST00000438647 ECHS1P30084 290 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms